RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 AKNAQ7Z591 1439 aa19.06■□□□□ 0.64
CCDC57-203ENST00000392343 DEKP35659 375 aaKnown RBP19.05■□□□□ 0.64
CCDC57-203ENST00000392343 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
CCDC57-203ENST00000392343 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
CCDC57-203ENST00000392343 ZNF644Q9H582 1327 aaPredicted RBP19.03■□□□□ 0.64
CCDC57-203ENST00000392343 HECW1Q76N89 1606 aa19.03■□□□□ 0.64
CCDC57-203ENST00000392343 URB2Q14146 1524 aaKnown RBP19.02■□□□□ 0.64
CCDC57-203ENST00000392343 CDK13Q14004 1512 aaKnown RBP19.01■□□□□ 0.63
CCDC57-203ENST00000392343 NOP58Q9Y2X3 529 aaKnown RBP19.01■□□□□ 0.63
CCDC57-203ENST00000392343 ARHGEF11O15085 1522 aa19■□□□□ 0.63
CCDC57-203ENST00000392343 GCC2Q8IWJ2 1684 aa19■□□□□ 0.63
CCDC57-203ENST00000392343 ANKRD30BQ9BXX2 1392 aa18.99■□□□□ 0.63
CCDC57-203ENST00000392343 CCDC136Q96JN2 1154 aa18.99■□□□□ 0.63
CCDC57-203ENST00000392343 TCOF1Q13428 1488 aaKnown RBP18.98■□□□□ 0.63
CCDC57-203ENST00000392343 EPRSP07814 1512 aaKnown RBP18.95■□□□□ 0.62
CCDC57-203ENST00000392343 RPRD2Q5VT52 1461 aaKnown RBP18.94■□□□□ 0.62
CCDC57-203ENST00000392343 THOC2Q8NI27 1593 aaKnown RBP18.94■□□□□ 0.62
CCDC57-203ENST00000392343 SPATA31E1Q6ZUB1 1445 aa18.94■□□□□ 0.62
CCDC57-203ENST00000392343 NUDCQ9Y266 331 aa18.94■□□□□ 0.62
CCDC57-203ENST00000392343 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
CCDC57-203ENST00000392343 TEX14Q8IWB6 1497 aa18.92■□□□□ 0.62
CCDC57-203ENST00000392343 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
CCDC57-203ENST00000392343 LAMC3Q9Y6N6 1575 aa18.91■□□□□ 0.62
CCDC57-203ENST00000392343 SALL2Q9Y467 1007 aaPredicted RBP18.91■□□□□ 0.62
CCDC57-203ENST00000392343 SMG6Q86US8 1419 aaKnown RBP18.9■□□□□ 0.62
CCDC57-203ENST00000392343 DAPK1P53355 1430 aa18.89■□□□□ 0.61
CCDC57-203ENST00000392343 DHX29Q7Z478 1369 aaKnown RBP18.89■□□□□ 0.61
CCDC57-203ENST00000392343 MIA2Q96PC5 1412 aa18.89■□□□□ 0.61
CCDC57-203ENST00000392343 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
CCDC57-203ENST00000392343 TMC1Q8TDI8 760 aa18.87■□□□□ 0.61
CCDC57-203ENST00000392343 ABCC5O15440 1437 aa18.87■□□□□ 0.61
CCDC57-203ENST00000392343 ANP32AP39687 249 aaKnown RBP18.87■□□□□ 0.61
CCDC57-203ENST00000392343 USP47Q96K76 1375 aa18.86■□□□□ 0.61
CCDC57-203ENST00000392343 NPM2Q86SE8 214 aaKnown RBP18.86■□□□□ 0.61
CCDC57-203ENST00000392343 IPO9Q96P70 1041 aaKnown RBP18.84■□□□□ 0.61
CCDC57-203ENST00000392343 MYT1LQ9UL68 1186 aa18.84■□□□□ 0.61
CCDC57-203ENST00000392343 PNISRQ8TF01 805 aaKnown RBP18.83■□□□□ 0.61
CCDC57-203ENST00000392343 ZBTB47Q9UFB7 747 aaPredicted RBP18.83■□□□□ 0.6
CCDC57-203ENST00000392343 PKD2Q13563 968 aa18.83■□□□□ 0.6
CCDC57-203ENST00000392343 KDM2AQ9Y2K7 1162 aa18.83■□□□□ 0.6
CCDC57-203ENST00000392343 BCORL1Q5H9F3 1711 aa18.82■□□□□ 0.6
CCDC57-203ENST00000392343 RNF123Q5XPI4 1314 aa18.81■□□□□ 0.6
CCDC57-203ENST00000392343 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
CCDC57-203ENST00000392343 IQGAP2Q13576 1575 aa18.79■□□□□ 0.6
CCDC57-203ENST00000392343 EXOC6Q8TAG9 804 aa18.78■□□□□ 0.6
CCDC57-203ENST00000392343 WDR62O43379 1518 aa18.78■□□□□ 0.6
CCDC57-203ENST00000392343 KIF21AQ7Z4S6 1674 aa18.77■□□□□ 0.6
CCDC57-203ENST00000392343 CARD11Q9BXL7 1154 aa18.77■□□□□ 0.6
CCDC57-203ENST00000392343 CFDP1Q9UEE9 299 aaPredicted RBP18.77■□□□□ 0.6
CCDC57-203ENST00000392343 PZPP20742 1482 aa18.77■□□□□ 0.6
CCDC57-203ENST00000392343 POLR1AO95602 1720 aaPredicted RBP18.76■□□□□ 0.59
CCDC57-203ENST00000392343 RTL5Q5HYW3 569 aaPredicted RBP18.76■□□□□ 0.59
CCDC57-203ENST00000392343 PDS5BQ9NTI5 1447 aa18.75■□□□□ 0.59
CCDC57-203ENST00000392343 ST20-MTHFSA0A0A6YYL1 179 aa18.75■□□□□ 0.59
CCDC57-203ENST00000392343 DNMT1P26358 1616 aaKnown RBP18.74■□□□□ 0.59
CCDC57-203ENST00000392343 LAS1LQ9Y4W2 734 aaKnown RBP18.72■□□□□ 0.59
CCDC57-203ENST00000392343 PRG4Q92954 1404 aaPredicted RBP18.72■□□□□ 0.59
CCDC57-203ENST00000392343 SKAP1Q86WV1 359 aa18.71■□□□□ 0.59
CCDC57-203ENST00000392343 RRP1P56182 461 aaKnown RBP18.71■□□□□ 0.59
CCDC57-203ENST00000392343 TARBP1Q13395 1621 aaKnown RBP18.7■□□□□ 0.58
CCDC57-203ENST00000392343 KIAA1107Q9UPP5 1409 aa18.7■□□□□ 0.58
CCDC57-203ENST00000392343 DCAF11Q8TEB1 546 aa18.68■□□□□ 0.58
CCDC57-203ENST00000392343 RCAN3Q9UKA8 241 aa18.68■□□□□ 0.58
CCDC57-203ENST00000392343 NUP153P49790 1475 aaKnown RBP18.68■□□□□ 0.58
CCDC57-203ENST00000392343 MBD5Q9P267 1494 aa18.68■□□□□ 0.58
CCDC57-203ENST00000392343 PLIN1O60240 522 aa18.67■□□□□ 0.58
CCDC57-203ENST00000392343 CDCA7LQ96GN5 454 aa18.67■□□□□ 0.58
CCDC57-203ENST00000392343 KDM5CP41229 1560 aa18.66■□□□□ 0.58
CCDC57-203ENST00000392343 PBRM1Q86U86 1689 aa18.66■□□□□ 0.58
CCDC57-203ENST00000392343 CAMSAP2Q08AD1 1489 aa18.66■□□□□ 0.58
CCDC57-203ENST00000392343 KIF15Q9NS87 1388 aa18.66■□□□□ 0.58
CCDC57-203ENST00000392343 PDE4AP27815 886 aa18.65■□□□□ 0.58
CCDC57-203ENST00000392343 MYBBP1AQ9BQG0 1328 aaKnown RBP18.65■□□□□ 0.58
CCDC57-203ENST00000392343 NUP155O75694 1391 aa18.65■□□□□ 0.58
CCDC57-203ENST00000392343 RTN4Q9NQC3 1192 aaKnown RBP18.63■□□□□ 0.57
CCDC57-203ENST00000392343 LRPPRCP42704 1394 aaKnown RBP18.62■□□□□ 0.57
CCDC57-203ENST00000392343 ARID4BQ4LE39 1312 aaPredicted RBP18.62■□□□□ 0.57
CCDC57-203ENST00000392343 ADAMTS12P58397 1594 aa18.62■□□□□ 0.57
CCDC57-203ENST00000392343 IL27Q8NEV9 243 aa18.62■□□□□ 0.57
CCDC57-203ENST00000392343 DISP1Q96F81 1524 aa18.61■□□□□ 0.57
CCDC57-203ENST00000392343 KIF14Q15058 1648 aa18.61■□□□□ 0.57
CCDC57-203ENST00000392343 NEFMP07197 916 aa18.61■□□□□ 0.57
CCDC57-203ENST00000392343 ROCK2O75116 1388 aaKnown RBP18.6■□□□□ 0.57
CCDC57-203ENST00000392343 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
CCDC57-203ENST00000392343 RALBP1Q15311 655 aa18.6■□□□□ 0.57
CCDC57-203ENST00000392343 RGL3Q3MIN7 710 aa18.6■□□□□ 0.57
CCDC57-203ENST00000392343 CC2D1BQ5T0F9 858 aaKnown RBP18.6■□□□□ 0.57
CCDC57-203ENST00000392343 BRD4O60885 1362 aaPredicted RBP18.59■□□□□ 0.57
CCDC57-203ENST00000392343 ANKRD30AQ9BXX3 1397 aa18.59■□□□□ 0.57
CCDC57-203ENST00000392343 TCERG1O14776 1098 aaKnown RBP18.59■□□□□ 0.57
CCDC57-203ENST00000392343 ZNF608Q9ULD9 1512 aaPredicted RBP18.58■□□□□ 0.57
CCDC57-203ENST00000392343 GPATCH8Q9UKJ3 1502 aaKnown RBP18.58■□□□□ 0.56
CCDC57-203ENST00000392343 BACH2Q9BYV9 841 aa18.58■□□□□ 0.56
CCDC57-203ENST00000392343 PLB1Q6P1J6 1458 aa18.57■□□□□ 0.56
CCDC57-203ENST00000392343 FBLN2P98095 1184 aa18.56■□□□□ 0.56
CCDC57-203ENST00000392343 KIAA0556O60303 1618 aa18.56■□□□□ 0.56
CCDC57-203ENST00000392343 RAPGEF6Q8TEU7 1601 aa18.56■□□□□ 0.56
CCDC57-203ENST00000392343 TROQ12816 1431 aaPredicted RBP18.56■□□□□ 0.56
CCDC57-203ENST00000392343 RALGAPBQ86X10 1494 aa18.56■□□□□ 0.56
CCDC57-203ENST00000392343 NBPF1Q3BBV0 1214 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms