RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 NCOA1Q15788 1441 aa22.27■■□□□ 1.16
TNIP1-202ENST00000389378 ERICH6BQ5W0A0 696 aa22.26■■□□□ 1.15
TNIP1-202ENST00000389378 CDK13Q14004 1512 aaKnown RBP22.26■■□□□ 1.15
TNIP1-202ENST00000389378 NBR1Q14596 966 aa22.24■■□□□ 1.15
TNIP1-202ENST00000389378 DNAJC5BQ9UF47 199 aa22.24■■□□□ 1.15
TNIP1-202ENST00000389378 AKNAQ7Z591 1439 aa22.23■■□□□ 1.15
TNIP1-202ENST00000389378 ANKRD30BQ9BXX2 1392 aa22.2■■□□□ 1.14
TNIP1-202ENST00000389378 HECW1Q76N89 1606 aa22.19■■□□□ 1.14
TNIP1-202ENST00000389378 PAK3O75914 559 aaPredicted RBP22.19■■□□□ 1.14
TNIP1-202ENST00000389378 ARHGEF11O15085 1522 aa22.19■■□□□ 1.14
TNIP1-202ENST00000389378 TCOF1Q13428 1488 aaKnown RBP22.17■■□□□ 1.14
TNIP1-202ENST00000389378 EPRSP07814 1512 aaKnown RBP22.17■■□□□ 1.14
TNIP1-202ENST00000389378 GCC2Q8IWJ2 1684 aa22.16■■□□□ 1.14
TNIP1-202ENST00000389378 CCDC136Q96JN2 1154 aa22.16■■□□□ 1.14
TNIP1-202ENST00000389378 DEKP35659 375 aaKnown RBP22.14■■□□□ 1.14
TNIP1-202ENST00000389378 ZNF777Q9ULD5 760 aaPredicted RBP22.14■■□□□ 1.14
TNIP1-202ENST00000389378 ABCA5Q8WWZ7 1642 aa22.14■■□□□ 1.13
TNIP1-202ENST00000389378 THOC2Q8NI27 1593 aaKnown RBP22.14■■□□□ 1.13
TNIP1-202ENST00000389378 NOP58Q9Y2X3 529 aaKnown RBP22.13■■□□□ 1.13
TNIP1-202ENST00000389378 RPRD2Q5VT52 1461 aaKnown RBP22.13■■□□□ 1.13
TNIP1-202ENST00000389378 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
TNIP1-202ENST00000389378 SALL2Q9Y467 1007 aaPredicted RBP22.1■■□□□ 1.13
TNIP1-202ENST00000389378 SPATA31E1Q6ZUB1 1445 aa22.1■■□□□ 1.13
TNIP1-202ENST00000389378 TEX14Q8IWB6 1497 aa22.1■■□□□ 1.13
TNIP1-202ENST00000389378 DAPK1P53355 1430 aa22.09■■□□□ 1.13
TNIP1-202ENST00000389378 NUDCQ9Y266 331 aa22.09■■□□□ 1.13
TNIP1-202ENST00000389378 MIA2Q96PC5 1412 aa22.09■■□□□ 1.13
TNIP1-202ENST00000389378 ABCC5O15440 1437 aa22.07■■□□□ 1.12
TNIP1-202ENST00000389378 TMC1Q8TDI8 760 aa22.06■■□□□ 1.12
TNIP1-202ENST00000389378 USP47Q96K76 1375 aa22.04■■□□□ 1.12
TNIP1-202ENST00000389378 DHX29Q7Z478 1369 aaKnown RBP22.04■■□□□ 1.12
TNIP1-202ENST00000389378 PKD2Q13563 968 aa22.04■■□□□ 1.12
TNIP1-202ENST00000389378 KDM2AQ9Y2K7 1162 aa22.04■■□□□ 1.12
TNIP1-202ENST00000389378 SMG6Q86US8 1419 aaKnown RBP22.02■■□□□ 1.12
TNIP1-202ENST00000389378 CFDP1Q9UEE9 299 aaPredicted RBP22■■□□□ 1.11
TNIP1-202ENST00000389378 NPM2Q86SE8 214 aaKnown RBP22■■□□□ 1.11
TNIP1-202ENST00000389378 IQGAP2Q13576 1575 aa21.99■■□□□ 1.11
TNIP1-202ENST00000389378 PDS5BQ9NTI5 1447 aa21.99■■□□□ 1.11
TNIP1-202ENST00000389378 ANP32AP39687 249 aaKnown RBP21.99■■□□□ 1.11
TNIP1-202ENST00000389378 PNISRQ8TF01 805 aaKnown RBP21.99■■□□□ 1.11
TNIP1-202ENST00000389378 ROCK1Q13464 1354 aa21.97■■□□□ 1.11
TNIP1-202ENST00000389378 CARD11Q9BXL7 1154 aa21.96■■□□□ 1.11
TNIP1-202ENST00000389378 WDR62O43379 1518 aa21.96■■□□□ 1.11
TNIP1-202ENST00000389378 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
TNIP1-202ENST00000389378 IPO9Q96P70 1041 aaKnown RBP21.93■■□□□ 1.1
TNIP1-202ENST00000389378 ZBTB47Q9UFB7 747 aaPredicted RBP21.93■■□□□ 1.1
TNIP1-202ENST00000389378 PZPP20742 1482 aa21.93■■□□□ 1.1
TNIP1-202ENST00000389378 PRG4Q92954 1404 aaPredicted RBP21.92■■□□□ 1.1
TNIP1-202ENST00000389378 ST20-MTHFSA0A0A6YYL1 179 aa21.92■■□□□ 1.1
TNIP1-202ENST00000389378 KIF21AQ7Z4S6 1674 aa21.92■■□□□ 1.1
TNIP1-202ENST00000389378 EXOC6Q8TAG9 804 aa21.91■■□□□ 1.1
TNIP1-202ENST00000389378 RNF123Q5XPI4 1314 aa21.9■■□□□ 1.1
TNIP1-202ENST00000389378 MYT1LQ9UL68 1186 aa21.9■■□□□ 1.1
TNIP1-202ENST00000389378 DNMT1P26358 1616 aaKnown RBP21.89■■□□□ 1.1
TNIP1-202ENST00000389378 TARBP1Q13395 1621 aaKnown RBP21.89■■□□□ 1.1
TNIP1-202ENST00000389378 DCAF11Q8TEB1 546 aa21.87■■□□□ 1.09
TNIP1-202ENST00000389378 NUP153P49790 1475 aaKnown RBP21.87■■□□□ 1.09
TNIP1-202ENST00000389378 KIAA1107Q9UPP5 1409 aa21.86■■□□□ 1.09
TNIP1-202ENST00000389378 RTL5Q5HYW3 569 aaPredicted RBP21.86■■□□□ 1.09
TNIP1-202ENST00000389378 NUP155O75694 1391 aa21.83■■□□□ 1.09
TNIP1-202ENST00000389378 SKAP1Q86WV1 359 aa21.83■■□□□ 1.09
TNIP1-202ENST00000389378 PBRM1Q86U86 1689 aa21.83■■□□□ 1.08
TNIP1-202ENST00000389378 FBLN2P98095 1184 aa21.83■■□□□ 1.08
TNIP1-202ENST00000389378 POLR1AO95602 1720 aaPredicted RBP21.82■■□□□ 1.08
TNIP1-202ENST00000389378 CAMSAP2Q08AD1 1489 aa21.82■■□□□ 1.08
TNIP1-202ENST00000389378 RRP1P56182 461 aaKnown RBP21.82■■□□□ 1.08
TNIP1-202ENST00000389378 LAS1LQ9Y4W2 734 aaKnown RBP21.82■■□□□ 1.08
TNIP1-202ENST00000389378 CDCA7LQ96GN5 454 aa21.8■■□□□ 1.08
TNIP1-202ENST00000389378 RCAN3Q9UKA8 241 aa21.8■■□□□ 1.08
TNIP1-202ENST00000389378 MBD5Q9P267 1494 aa21.8■■□□□ 1.08
TNIP1-202ENST00000389378 ADAMTS12P58397 1594 aa21.8■■□□□ 1.08
TNIP1-202ENST00000389378 PLIN1O60240 522 aa21.8■■□□□ 1.08
TNIP1-202ENST00000389378 ZNF608Q9ULD9 1512 aaPredicted RBP21.8■■□□□ 1.08
TNIP1-202ENST00000389378 KIF15Q9NS87 1388 aa21.79■■□□□ 1.08
TNIP1-202ENST00000389378 DISP1Q96F81 1524 aa21.79■■□□□ 1.08
TNIP1-202ENST00000389378 MYBBP1AQ9BQG0 1328 aaKnown RBP21.78■■□□□ 1.08
TNIP1-202ENST00000389378 RGL3Q3MIN7 710 aa21.78■■□□□ 1.08
TNIP1-202ENST00000389378 ANKRD50Q9ULJ7 1429 aa21.77■■□□□ 1.08
TNIP1-202ENST00000389378 ANKRD30AQ9BXX3 1397 aa21.77■■□□□ 1.07
TNIP1-202ENST00000389378 KDM5CP41229 1560 aa21.77■■□□□ 1.07
TNIP1-202ENST00000389378 PLB1Q6P1J6 1458 aa21.76■■□□□ 1.07
TNIP1-202ENST00000389378 CC2D1BQ5T0F9 858 aaKnown RBP21.75■■□□□ 1.07
TNIP1-202ENST00000389378 GPATCH8Q9UKJ3 1502 aaKnown RBP21.75■■□□□ 1.07
TNIP1-202ENST00000389378 TROQ12816 1431 aaPredicted RBP21.74■■□□□ 1.07
TNIP1-202ENST00000389378 PDE4AP27815 886 aa21.74■■□□□ 1.07
TNIP1-202ENST00000389378 ARID4BQ4LE39 1312 aaPredicted RBP21.74■■□□□ 1.07
TNIP1-202ENST00000389378 ROCK2O75116 1388 aaKnown RBP21.73■■□□□ 1.07
TNIP1-202ENST00000389378 KIAA0556O60303 1618 aa21.72■■□□□ 1.07
TNIP1-202ENST00000389378 RALBP1Q15311 655 aa21.72■■□□□ 1.07
TNIP1-202ENST00000389378 LRPPRCP42704 1394 aaKnown RBP21.72■■□□□ 1.07
TNIP1-202ENST00000389378 HNRNPMP52272 730 aaKnown RBP eCLIP21.72■■□□□ 1.071e-6■■■■□ 22.9
TNIP1-202ENST00000389378 RAPGEF6Q8TEU7 1601 aa21.71■■□□□ 1.07
TNIP1-202ENST00000389378 KIF14Q15058 1648 aa21.71■■□□□ 1.07
TNIP1-202ENST00000389378 BRD4O60885 1362 aaPredicted RBP21.71■■□□□ 1.07
TNIP1-202ENST00000389378 NBPF1Q3BBV0 1214 aa21.7■■□□□ 1.06
TNIP1-202ENST00000389378 KIAA0586Q9BVV6 1533 aa21.7■■□□□ 1.06
TNIP1-202ENST00000389378 TSPY4P0CV99 314 aa21.69■■□□□ 1.06
TNIP1-202ENST00000389378 TSPY10P0CW01 314 aa21.69■■□□□ 1.06
TNIP1-202ENST00000389378 CHMP7Q8WUX9 453 aaPredicted RBP21.68■■□□□ 1.06
TNIP1-202ENST00000389378 RALGAPBQ86X10 1494 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms