RNA–Protein interactions for RNA: ENST00000382998.8

CTIF-202, Transcript of cap binding complex dependent translation initiation factor, humanhuman

TSL 1 (best) BASIC

Gene CTIF, Length 4,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTIF-202ENST00000382998 BICRAQ9NZM4 1560 aa17.95■□□□□ 0.46
CTIF-202ENST00000382998 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
CTIF-202ENST00000382998 ZNF526Q8TF50 670 aaPredicted RBP17.94■□□□□ 0.46
CTIF-202ENST00000382998 AQRO60306 1485 aaKnown RBP eCLIP17.92■□□□□ 0.46
CTIF-202ENST00000382998 PLCD3Q8N3E9 789 aa17.92■□□□□ 0.46
CTIF-202ENST00000382998 KDM2AQ9Y2K7 1162 aa17.91■□□□□ 0.46
CTIF-202ENST00000382998 PPP1R15AO75807 674 aaPredicted RBP17.9■□□□□ 0.46
CTIF-202ENST00000382998 PTMAP06454 111 aaKnown RBP17.9■□□□□ 0.46
CTIF-202ENST00000382998 BRPF3Q9ULD4 1205 aa17.9■□□□□ 0.46
CTIF-202ENST00000382998 ANP32CO43423 234 aa17.9■□□□□ 0.46
CTIF-202ENST00000382998 L1TD1Q5T7N2 865 aaKnown RBP17.88■□□□□ 0.45
CTIF-202ENST00000382998 DDX10Q13206 875 aaKnown RBP17.88■□□□□ 0.45
CTIF-202ENST00000382998 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
CTIF-202ENST00000382998 WWC1Q8IX03 1113 aa17.86■□□□□ 0.45
CTIF-202ENST00000382998 CCNB3Q8WWL7 1395 aa17.85■□□□□ 0.45
CTIF-202ENST00000382998 DDRGK1Q96HY6 314 aa17.85■□□□□ 0.45
CTIF-202ENST00000382998 HIRIP3Q9BW71 556 aaPredicted RBP17.84■□□□□ 0.45
CTIF-202ENST00000382998 VPS8Q8N3P4 1428 aa17.84■□□□□ 0.45
CTIF-202ENST00000382998 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
CTIF-202ENST00000382998 RGL3Q3MIN7 710 aa17.84■□□□□ 0.45
CTIF-202ENST00000382998 GSE1Q14687 1217 aa17.82■□□□□ 0.44
CTIF-202ENST00000382998 GGT6Q6P531 493 aa17.82■□□□□ 0.44
CTIF-202ENST00000382998 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
CTIF-202ENST00000382998 HMGB1P09429 215 aaKnown RBP17.81■□□□□ 0.44
CTIF-202ENST00000382998 MAPK8IP2Q13387 824 aaPredicted RBP17.81■□□□□ 0.44
CTIF-202ENST00000382998 FHAD1B1AJZ9 1412 aa17.8■□□□□ 0.44
CTIF-202ENST00000382998 TONSLQ96HA7 1378 aa17.79■□□□□ 0.44
CTIF-202ENST00000382998 RAPGEF2Q9Y4G8 1499 aa17.79■□□□□ 0.44
CTIF-202ENST00000382998 PTPRGP23470 1445 aa17.78■□□□□ 0.44
CTIF-202ENST00000382998 EFCAB2Q5VUJ9 269 aa17.78■□□□□ 0.44
CTIF-202ENST00000382998 FAM43AQ8N2R8 423 aa17.77■□□□□ 0.44
CTIF-202ENST00000382998 CFTRP13569 1480 aa17.77■□□□□ 0.43
CTIF-202ENST00000382998 RGS3P49796 1198 aa17.76■□□□□ 0.43
CTIF-202ENST00000382998 AEBP1Q8IUX7 1158 aa17.75■□□□□ 0.43
CTIF-202ENST00000382998 IPO9Q96P70 1041 aaKnown RBP17.75■□□□□ 0.43
CTIF-202ENST00000382998 MRC2Q9UBG0 1479 aa17.74■□□□□ 0.43
CTIF-202ENST00000382998 FHOD3Q2V2M9 1422 aa17.74■□□□□ 0.43
CTIF-202ENST00000382998 IRX3P78415 501 aaPredicted RBP17.72■□□□□ 0.43
CTIF-202ENST00000382998 FAM69CQ0P6D2 419 aa17.72■□□□□ 0.43
CTIF-202ENST00000382998 IGF1RP08069 1367 aa17.71■□□□□ 0.42
CTIF-202ENST00000382998 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
CTIF-202ENST00000382998 FAM13BQ9NYF5 915 aa17.7■□□□□ 0.42
CTIF-202ENST00000382998 CFAP44Q96MT7 982 aa17.7■□□□□ 0.42
CTIF-202ENST00000382998 SIN3AQ96ST3 1273 aa17.7■□□□□ 0.42
CTIF-202ENST00000382998 MSH5O43196 834 aa17.69■□□□□ 0.42
CTIF-202ENST00000382998 MSNP26038 577 aaKnown RBP17.67■□□□□ 0.42
CTIF-202ENST00000382998 FTSJ3Q8IY81 847 aaKnown RBP17.67■□□□□ 0.42
CTIF-202ENST00000382998 MAP7D2Q96T17 732 aa17.67■□□□□ 0.42
CTIF-202ENST00000382998 CALRP27797 417 aaKnown RBP17.67■□□□□ 0.42
CTIF-202ENST00000382998 BCCIPQ9P287 314 aaKnown RBP eCLIP17.67■□□□□ 0.42
CTIF-202ENST00000382998 HNRNPUQ00839 825 aaKnown RBP eCLIP17.67■□□□□ 0.425e-6■■■□□ 15.8
CTIF-202ENST00000382998 IPO4Q8TEX9 1081 aaKnown RBP17.66■□□□□ 0.42
CTIF-202ENST00000382998 E9PSI1 815 aa17.66■□□□□ 0.42
CTIF-202ENST00000382998 FMN1Q68DA7 1419 aa17.65■□□□□ 0.42
CTIF-202ENST00000382998 PPP4R2Q9NY27 417 aa17.65■□□□□ 0.42
CTIF-202ENST00000382998 HNRNPMP52272 730 aaKnown RBP eCLIP17.65■□□□□ 0.422e-6■■■■□ 19.3
CTIF-202ENST00000382998 CC2D1BQ5T0F9 858 aaKnown RBP17.64■□□□□ 0.41
CTIF-202ENST00000382998 ZHX1Q9UKY1 873 aaPredicted RBP17.64■□□□□ 0.41
CTIF-202ENST00000382998 ZNF771Q7L3S4 317 aaPredicted RBP17.62■□□□□ 0.41
CTIF-202ENST00000382998 FAM193AP78312 1265 aa17.61■□□□□ 0.41
CTIF-202ENST00000382998 GRIN2BQ13224 1484 aa17.61■□□□□ 0.41
CTIF-202ENST00000382998 PRDM10Q9NQV6 1147 aa17.61■□□□□ 0.41
CTIF-202ENST00000382998 OS9Q13438 667 aaPredicted RBP17.61■□□□□ 0.41
CTIF-202ENST00000382998 TOPBP1Q92547 1522 aa17.6■□□□□ 0.41
CTIF-202ENST00000382998 KIF3BO15066 747 aa17.59■□□□□ 0.41
CTIF-202ENST00000382998 CNPY4Q8N129 248 aa17.59■□□□□ 0.41
CTIF-202ENST00000382998 TAOK2Q9UL54 1235 aa17.58■□□□□ 0.41
CTIF-202ENST00000382998 ZBTB7CA1YPR0 619 aa17.58■□□□□ 0.4
CTIF-202ENST00000382998 ZFP91Q96JP5 570 aaPredicted RBP17.58■□□□□ 0.4
CTIF-202ENST00000382998 IFT140Q96RY7 1462 aa17.57■□□□□ 0.4
CTIF-202ENST00000382998 PLCD4Q9BRC7 762 aa17.57■□□□□ 0.4
CTIF-202ENST00000382998 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
CTIF-202ENST00000382998 TPM2P07951 284 aa17.56■□□□□ 0.4
CTIF-202ENST00000382998 PDCL3Q9H2J4 239 aa17.56■□□□□ 0.4
CTIF-202ENST00000382998 A0A0G2JS52 829 aa17.55■□□□□ 0.4
CTIF-202ENST00000382998 SPAG9O60271 1321 aaKnown RBP17.55■□□□□ 0.4
CTIF-202ENST00000382998 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
CTIF-202ENST00000382998 TAF3Q5VWG9 929 aa17.54■□□□□ 0.4
CTIF-202ENST00000382998 B4GALNT3Q6L9W6 998 aa17.54■□□□□ 0.4
CTIF-202ENST00000382998 VGLL3A8MV65 326 aa17.54■□□□□ 0.4
CTIF-202ENST00000382998 CLGNO14967 610 aa17.54■□□□□ 0.4
CTIF-202ENST00000382998 LMOD2Q6P5Q4 547 aa17.53■□□□□ 0.4
CTIF-202ENST00000382998 KANK1Q14678 1352 aa17.52■□□□□ 0.4
CTIF-202ENST00000382998 MTERF4Q7Z6M4 381 aaKnown RBP17.5■□□□□ 0.39
CTIF-202ENST00000382998 FAM9BQ8IZU0 186 aa17.5■□□□□ 0.39
CTIF-202ENST00000382998 TMC1Q8TDI8 760 aa17.5■□□□□ 0.39
CTIF-202ENST00000382998 PRG4Q92954 1404 aaPredicted RBP17.5■□□□□ 0.39
CTIF-202ENST00000382998 FBXO3Q9UK99 471 aa17.5■□□□□ 0.39
CTIF-202ENST00000382998 RAB3GAP2Q9H2M9 1393 aa17.48■□□□□ 0.39
CTIF-202ENST00000382998 PSMD1Q99460 953 aa17.48■□□□□ 0.39
CTIF-202ENST00000382998 MYH16Q9H6N6 1097 aa17.48■□□□□ 0.39
CTIF-202ENST00000382998 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
CTIF-202ENST00000382998 GOLGA6L3A6NEY3 463 aa17.47■□□□□ 0.39
CTIF-202ENST00000382998 POGKQ9P215 609 aa17.47■□□□□ 0.39
CTIF-202ENST00000382998 CALD1Q05682 793 aaKnown RBP17.47■□□□□ 0.39
CTIF-202ENST00000382998 LAMC3Q9Y6N6 1575 aa17.47■□□□□ 0.39
CTIF-202ENST00000382998 UPF2Q9HAU5 1272 aaKnown RBP17.46■□□□□ 0.39
CTIF-202ENST00000382998 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
CTIF-202ENST00000382998 WASHC2CQ9Y4E1 1318 aa17.46■□□□□ 0.39
CTIF-202ENST00000382998 ARHGAP35Q9NRY4 1499 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms