RNA–Protein interactions for RNA: ENST00000382041.7

NIN-203, Transcript of ninein, humanhuman

TSL 1 (best) BASIC

Gene NIN, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-203ENST00000382041 PAK3O75914 559 aaPredicted RBP20■□□□□ 0.79
NIN-203ENST00000382041 TULP1O00294 542 aaPredicted RBP19.99■□□□□ 0.79
NIN-203ENST00000382041 EFCAB2Q5VUJ9 269 aa19.99■□□□□ 0.79
NIN-203ENST00000382041 KIF3BO15066 747 aa19.99■□□□□ 0.79
NIN-203ENST00000382041 TIMELESSQ9UNS1 1208 aa19.98■□□□□ 0.79
NIN-203ENST00000382041 PNNQ9H307 717 aaKnown RBP19.97■□□□□ 0.79
NIN-203ENST00000382041 FMN1Q68DA7 1419 aa19.97■□□□□ 0.79
NIN-203ENST00000382041 TRIM44Q96DX7 344 aaPredicted RBP19.97■□□□□ 0.79
NIN-203ENST00000382041 APBB1O00213 710 aa19.95■□□□□ 0.78
NIN-203ENST00000382041 CDK11BP21127 795 aaKnown RBP19.95■□□□□ 0.78
NIN-203ENST00000382041 KTN1Q86UP2 1357 aaKnown RBP19.94■□□□□ 0.78
NIN-203ENST00000382041 HDGFL2Q7Z4V5 671 aaPredicted RBP19.94■□□□□ 0.78
NIN-203ENST00000382041 NAP1L2Q9ULW6 460 aaPredicted RBP19.94■□□□□ 0.78
NIN-203ENST00000382041 ANKRD30AQ9BXX3 1397 aa19.93■□□□□ 0.78
NIN-203ENST00000382041 U2AF1L5P0DN76 240 aaPredicted RBP19.93■□□□□ 0.78
NIN-203ENST00000382041 U2AF1Q01081 240 aaKnown RBP eCLIP19.93■□□□□ 0.78
NIN-203ENST00000382041 KCNJ4P48050 445 aa19.92■□□□□ 0.78
NIN-203ENST00000382041 TOP2AP11388 1531 aaKnown RBP19.92■□□□□ 0.78
NIN-203ENST00000382041 FGD1P98174 961 aa19.91■□□□□ 0.78
NIN-203ENST00000382041 RTF1Q92541 710 aaKnown RBP19.91■□□□□ 0.78
NIN-203ENST00000382041 ZRSR1Q15695 479 aaKnown RBP19.91■□□□□ 0.78
NIN-203ENST00000382041 L3MBTL2Q969R5 705 aa19.91■□□□□ 0.78
NIN-203ENST00000382041 CADPSQ9ULU8 1353 aa19.91■□□□□ 0.78
NIN-203ENST00000382041 SPRYD3Q8NCJ5 442 aa19.91■□□□□ 0.78
NIN-203ENST00000382041 RAPGEF2Q9Y4G8 1499 aa19.9■□□□□ 0.78
NIN-203ENST00000382041 CCER2I3L3R5 266 aa19.9■□□□□ 0.78
NIN-203ENST00000382041 MS4A1P11836 297 aa19.9■□□□□ 0.78
NIN-203ENST00000382041 HSP90AB1P08238 724 aaKnown RBP19.9■□□□□ 0.78
NIN-203ENST00000382041 PTMAP06454 111 aaKnown RBP19.9■□□□□ 0.78
NIN-203ENST00000382041 CHMP4BQ9H444 224 aaKnown RBP19.88■□□□□ 0.77
NIN-203ENST00000382041 PLCB2Q00722 1185 aa19.87■□□□□ 0.77
NIN-203ENST00000382041 NUTM2FA1L443 756 aa19.87■□□□□ 0.77
NIN-203ENST00000382041 JPH4Q96JJ6 628 aa19.87■□□□□ 0.77
NIN-203ENST00000382041 GOLGA2Q08379 1002 aa19.86■□□□□ 0.77
NIN-203ENST00000382041 ZNF330Q9Y3S2 320 aaPredicted RBP19.86■□□□□ 0.77
NIN-203ENST00000382041 NOP58Q9Y2X3 529 aaKnown RBP19.85■□□□□ 0.77
NIN-203ENST00000382041 RUSC2Q8N2Y8 1516 aa19.85■□□□□ 0.77
NIN-203ENST00000382041 SPAG9O60271 1321 aaKnown RBP19.85■□□□□ 0.77
NIN-203ENST00000382041 CSB-PGBD3P0DP91 1061 aa19.84■□□□□ 0.77
NIN-203ENST00000382041 ANP32EQ9BTT0 268 aa19.84■□□□□ 0.77
NIN-203ENST00000382041 WASHC2CQ9Y4E1 1318 aa19.83■□□□□ 0.77
NIN-203ENST00000382041 CCDC146Q8IYE0 955 aa19.83■□□□□ 0.77
NIN-203ENST00000382041 RCAN3Q9UKA8 241 aa19.8■□□□□ 0.76
NIN-203ENST00000382041 RTN4Q9NQC3 1192 aaKnown RBP19.79■□□□□ 0.76
NIN-203ENST00000382041 ITPRIPQ8IWB1 547 aa19.79■□□□□ 0.76
NIN-203ENST00000382041 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
NIN-203ENST00000382041 TRAK1Q9UPV9 953 aa19.79■□□□□ 0.76
NIN-203ENST00000382041 DNTTIP2Q5QJE6 756 aaKnown RBP19.78■□□□□ 0.76
NIN-203ENST00000382041 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.77■□□□□ 0.76
NIN-203ENST00000382041 RALBP1Q15311 655 aa19.77■□□□□ 0.76
NIN-203ENST00000382041 HSCBQ8IWL3 235 aa19.75■□□□□ 0.75
NIN-203ENST00000382041 CCDC18Q5T9S5 1454 aa19.75■□□□□ 0.75
NIN-203ENST00000382041 GLIPR1L2Q4G1C9 344 aa19.74■□□□□ 0.75
NIN-203ENST00000382041 LTV1Q96GA3 475 aaPredicted RBP19.74■□□□□ 0.75
NIN-203ENST00000382041 CLUAP1Q96AJ1 413 aa19.73■□□□□ 0.75
NIN-203ENST00000382041 IPO8O15397 1037 aaKnown RBP19.72■□□□□ 0.75
NIN-203ENST00000382041 NGDNQ8NEJ9 315 aaKnown RBP19.72■□□□□ 0.75
NIN-203ENST00000382041 EIF3AQ14152 1382 aaKnown RBP19.71■□□□□ 0.75
NIN-203ENST00000382041 ST20-MTHFSA0A0A6YYL1 179 aa19.7■□□□□ 0.74
NIN-203ENST00000382041 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
NIN-203ENST00000382041 TERF2IPQ9NYB0 399 aa19.7■□□□□ 0.74
NIN-203ENST00000382041 RRP7AQ9Y3A4 280 aaKnown RBP19.69■□□□□ 0.74
NIN-203ENST00000382041 EID1Q9Y6B2 187 aa19.69■□□□□ 0.74
NIN-203ENST00000382041 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
NIN-203ENST00000382041 RBM19Q9Y4C8 960 aaKnown RBP19.69■□□□□ 0.74
NIN-203ENST00000382041 SMC4Q9NTJ3 1288 aa19.68■□□□□ 0.74
NIN-203ENST00000382041 CCDC9Q9Y3X0 531 aaKnown RBP19.68■□□□□ 0.74
NIN-203ENST00000382041 SMARCA4P51532 1647 aa19.68■□□□□ 0.74
NIN-203ENST00000382041 ISY1Q9ULR0 285 aaKnown RBP19.67■□□□□ 0.74
NIN-203ENST00000382041 GOLGA6L4A6NEF3 574 aa19.66■□□□□ 0.74
NIN-203ENST00000382041 MCCP23508 829 aa19.66■□□□□ 0.74
NIN-203ENST00000382041 SLC4A10Q6U841 1118 aa19.66■□□□□ 0.74
NIN-203ENST00000382041 RSPH4AQ5TD94 716 aa19.65■□□□□ 0.74
NIN-203ENST00000382041 CALD1Q05682 793 aaKnown RBP19.64■□□□□ 0.74
NIN-203ENST00000382041 PANK3Q9H999 370 aa19.64■□□□□ 0.73
NIN-203ENST00000382041 AMPHP49418 695 aa19.64■□□□□ 0.73
NIN-203ENST00000382041 CHMP3Q9Y3E7 222 aa19.64■□□□□ 0.73
NIN-203ENST00000382041 RWDD1Q9H446 243 aaPredicted RBP19.63■□□□□ 0.73
NIN-203ENST00000382041 NLRP13Q86W25 1043 aa19.62■□□□□ 0.73
NIN-203ENST00000382041 STK31Q9BXU1 1019 aa19.62■□□□□ 0.73
NIN-203ENST00000382041 PTPRGP23470 1445 aa19.62■□□□□ 0.73
NIN-203ENST00000382041 CCDC144AA2RUR9 1427 aa19.62■□□□□ 0.73
NIN-203ENST00000382041 SLKQ9H2G2 1235 aaPredicted RBP19.61■□□□□ 0.73
NIN-203ENST00000382041 DHX57Q6P158 1386 aaKnown RBP19.61■□□□□ 0.73
NIN-203ENST00000382041 KIAA1211Q6ZU35 1233 aa19.6■□□□□ 0.73
NIN-203ENST00000382041 NAP1L5Q96NT1 182 aaPredicted RBP19.6■□□□□ 0.73
NIN-203ENST00000382041 ELL2O00472 640 aaPredicted RBP19.59■□□□□ 0.73
NIN-203ENST00000382041 MFAP1P55081 439 aaKnown RBP19.58■□□□□ 0.73
NIN-203ENST00000382041 BCL2L13Q9BXK5 485 aa19.58■□□□□ 0.72
NIN-203ENST00000382041 RAD54L2Q9Y4B4 1467 aa19.57■□□□□ 0.72
NIN-203ENST00000382041 CENPJQ9HC77 1338 aaPredicted RBP19.56■□□□□ 0.72
NIN-203ENST00000382041 ERICH6BQ5W0A0 696 aa19.56■□□□□ 0.72
NIN-203ENST00000382041 MINK1Q8N4C8 1332 aaPredicted RBP19.56■□□□□ 0.72
NIN-203ENST00000382041 TRIM6-TRIM34B2RNG4 842 aa19.55■□□□□ 0.72
NIN-203ENST00000382041 ZNF644Q9H582 1327 aaPredicted RBP19.55■□□□□ 0.72
NIN-203ENST00000382041 GZF1Q9H116 711 aaPredicted RBP19.54■□□□□ 0.72
NIN-203ENST00000382041 GNL2Q13823 731 aaKnown RBP19.53■□□□□ 0.72
NIN-203ENST00000382041 PLIN1O60240 522 aa19.53■□□□□ 0.72
NIN-203ENST00000382041 GORABQ5T7V8 394 aa19.53■□□□□ 0.72
NIN-203ENST00000382041 NOL8Q76FK4 1167 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms