RNA–Protein interactions for RNA: ENST00000381984.2

RFX3-203, Transcript of regulatory factor X3, humanhuman

TSL 3 BASIC

Gene RFX3, Length 364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-203ENST00000381984 FBXO3Q9UK99 471 aa7.58□□□□□ -1.2
RFX3-203ENST00000381984 VASPP50552 380 aaPredicted RBP7.54□□□□□ -1.2
RFX3-203ENST00000381984 AXIN2Q9Y2T1 843 aa7.54□□□□□ -1.2
RFX3-203ENST00000381984 MS4A4AQ96JQ5 239 aa7.52□□□□□ -1.21
RFX3-203ENST00000381984 PBX2P40425 430 aa7.51□□□□□ -1.21
RFX3-203ENST00000381984 CIZ1Q9ULV3 898 aaPredicted RBP7.51□□□□□ -1.21
RFX3-203ENST00000381984 NUDT7P0C024 238 aa7.47□□□□□ -1.21
RFX3-203ENST00000381984 SOX12O15370 315 aa7.46□□□□□ -1.22
RFX3-203ENST00000381984 LHX6Q9UPM6 363 aa7.46□□□□□ -1.22
RFX3-203ENST00000381984 ADGRD1Q6QNK2 874 aa7.45□□□□□ -1.22
RFX3-203ENST00000381984 SPOCK2Q92563 424 aa7.45□□□□□ -1.22
RFX3-203ENST00000381984 PHF8Q9UPP1 1060 aa7.45□□□□□ -1.22
RFX3-203ENST00000381984 HRO43593 1189 aa7.41□□□□□ -1.22
RFX3-203ENST00000381984 IFNLR1Q8IU57 520 aaPredicted RBP7.41□□□□□ -1.22
RFX3-203ENST00000381984 ARHGAP33O14559 1287 aa7.4□□□□□ -1.22
RFX3-203ENST00000381984 IRX2Q9BZI1 471 aaPredicted RBP7.4□□□□□ -1.22
RFX3-203ENST00000381984 KIF3CO14782 793 aa7.39□□□□□ -1.23
RFX3-203ENST00000381984 PCDHGA4Q9Y5G9 962 aa7.39□□□□□ -1.23
RFX3-203ENST00000381984 RGS20O76081 388 aa7.38□□□□□ -1.23
RFX3-203ENST00000381984 KCTD12Q96CX2 325 aaKnown RBP7.38□□□□□ -1.23
RFX3-203ENST00000381984 C2orf72A6NCS6 295 aa7.37□□□□□ -1.23
RFX3-203ENST00000381984 TK2O00142 265 aa7.37□□□□□ -1.23
RFX3-203ENST00000381984 DMRTA1Q5VZB9 504 aa7.37□□□□□ -1.23
RFX3-203ENST00000381984 SLC34A2O95436 690 aa7.36□□□□□ -1.23
RFX3-203ENST00000381984 PSEN2P49810 448 aa7.35□□□□□ -1.23
RFX3-203ENST00000381984 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.34□□□□□ -1.23
RFX3-203ENST00000381984 ZFP91Q96JP5 570 aaPredicted RBP7.34□□□□□ -1.23
RFX3-203ENST00000381984 IFFO2Q5TF58 517 aa7.33□□□□□ -1.24
RFX3-203ENST00000381984 FBXO22Q8NEZ5 403 aa7.33□□□□□ -1.24
RFX3-203ENST00000381984 TRIM41Q8WV44 630 aa7.32□□□□□ -1.24
RFX3-203ENST00000381984 KDM4FA0A1W2PPD8 638 aa7.31□□□□□ -1.24
RFX3-203ENST00000381984 PTPN5P54829 565 aa7.31□□□□□ -1.24
RFX3-203ENST00000381984 NLRP6P59044 892 aa7.31□□□□□ -1.24
RFX3-203ENST00000381984 RNF25Q96BH1 459 aaPredicted RBP7.3□□□□□ -1.24
RFX3-203ENST00000381984 RIOK3O14730 519 aaKnown RBP7.29□□□□□ -1.24
RFX3-203ENST00000381984 A0A0G2JS52 829 aa7.28□□□□□ -1.24
RFX3-203ENST00000381984 PSDA5PKW4 1024 aaPredicted RBP7.28□□□□□ -1.24
RFX3-203ENST00000381984 STAC3Q96MF2 364 aa7.27□□□□□ -1.25
RFX3-203ENST00000381984 VGFO15240 615 aaPredicted RBP7.26□□□□□ -1.25
RFX3-203ENST00000381984 MFRPQ9BY79 579 aa7.25□□□□□ -1.25
RFX3-203ENST00000381984 VPS9D1Q9Y2B5 631 aa7.23□□□□□ -1.25
RFX3-203ENST00000381984 Q6ZNB5 142 aa7.22□□□□□ -1.25
RFX3-203ENST00000381984 TMC2Q8TDI7 906 aa7.21□□□□□ -1.26
RFX3-203ENST00000381984 PTCD2Q8WV60 388 aaKnown RBP7.21□□□□□ -1.26
RFX3-203ENST00000381984 THSD4Q6ZMP0 1018 aa7.2□□□□□ -1.26
RFX3-203ENST00000381984 PPP4R3BQ5MIZ7 849 aa7.19□□□□□ -1.26
RFX3-203ENST00000381984 KCNK17Q96T54 332 aa7.19□□□□□ -1.26
RFX3-203ENST00000381984 BCL11BQ9C0K0 894 aaPredicted RBP7.19□□□□□ -1.26
RFX3-203ENST00000381984 BHMG1C9JSJ3 638 aaPredicted RBP7.17□□□□□ -1.26
RFX3-203ENST00000381984 LCE2BO14633 110 aa7.16□□□□□ -1.26
RFX3-203ENST00000381984 STK24Q9Y6E0 443 aa7.15□□□□□ -1.26
RFX3-203ENST00000381984 SLC4A5Q9BY07 1137 aa7.14□□□□□ -1.27
RFX3-203ENST00000381984 WNT2BQ93097 391 aa7.13□□□□□ -1.27
RFX3-203ENST00000381984 PPP1R37O75864 691 aa7.11□□□□□ -1.27
RFX3-203ENST00000381984 KCNH8Q96L42 1107 aa7.11□□□□□ -1.27
RFX3-203ENST00000381984 GOLGA8CPA6NN73 597 aa7.1□□□□□ -1.27
RFX3-203ENST00000381984 TRAF7Q6Q0C0 670 aa7.1□□□□□ -1.27
RFX3-203ENST00000381984 PLPP6Q8IY26 295 aa7.1□□□□□ -1.27
RFX3-203ENST00000381984 TBC1D12O60347 775 aa7.08□□□□□ -1.28
RFX3-203ENST00000381984 ITGBL1O95965 494 aaPredicted RBP7.08□□□□□ -1.28
RFX3-203ENST00000381984 FOXK1P85037 733 aa7.08□□□□□ -1.28
RFX3-203ENST00000381984 MRPL50Q8N5N7 158 aaKnown RBP7.08□□□□□ -1.28
RFX3-203ENST00000381984 ZBED2Q9BTP6 218 aa7.08□□□□□ -1.28
RFX3-203ENST00000381984 BCL2L12Q9HB09 334 aa7.08□□□□□ -1.28
RFX3-203ENST00000381984 STK25O00506 426 aa7.06□□□□□ -1.28
RFX3-203ENST00000381984 ZNF454Q8N9F8 522 aa7.06□□□□□ -1.28
RFX3-203ENST00000381984 TAOK2Q9UL54 1235 aa7.05□□□□□ -1.28
RFX3-203ENST00000381984 DSG2Q14126 1118 aa7.04□□□□□ -1.28
RFX3-203ENST00000381984 LAPTM4AQ15012 233 aa7.04□□□□□ -1.28
RFX3-203ENST00000381984 GFRA3O60609 400 aa7.03□□□□□ -1.28
RFX3-203ENST00000381984 PTPREP23469 700 aa7.02□□□□□ -1.29
RFX3-203ENST00000381984 GPHNQ9NQX3 736 aaPredicted RBP7.02□□□□□ -1.29
RFX3-203ENST00000381984 FOSBP53539 338 aa7.01□□□□□ -1.29
RFX3-203ENST00000381984 OXER1Q8TDS5 423 aa7□□□□□ -1.29
RFX3-203ENST00000381984 NBPF3Q9H094 633 aa6.99□□□□□ -1.29
RFX3-203ENST00000381984 KCNC4Q03721 635 aa6.98□□□□□ -1.29
RFX3-203ENST00000381984 BCAMP50895 628 aa6.97□□□□□ -1.29
RFX3-203ENST00000381984 UPF1Q92900 1129 aaKnown RBP eCLIP6.97□□□□□ -1.29
RFX3-203ENST00000381984 ZNF787Q6DD87 383 aa6.96□□□□□ -1.3
RFX3-203ENST00000381984 ANKK1Q8NFD2 765 aa6.96□□□□□ -1.3
RFX3-203ENST00000381984 ZNF775Q96BV0 537 aaPredicted RBP6.96□□□□□ -1.3
RFX3-203ENST00000381984 ADAM33Q9BZ11 813 aa6.96□□□□□ -1.3
RFX3-203ENST00000381984 ECM2O94769 699 aaPredicted RBP6.95□□□□□ -1.3
RFX3-203ENST00000381984 SOWAHBA6NEL2 793 aa6.94□□□□□ -1.3
RFX3-203ENST00000381984 ANO8Q9HCE9 1232 aaPredicted RBP6.94□□□□□ -1.3
RFX3-203ENST00000381984 WBP1LQ9NX94 342 aa6.94□□□□□ -1.3
RFX3-203ENST00000381984 NRG2O14511 850 aaPredicted RBP6.93□□□□□ -1.3
RFX3-203ENST00000381984 ZDHHC16Q969W1 377 aa6.93□□□□□ -1.3
RFX3-203ENST00000381984 RABGEF1Q9UJ41 708 aa6.93□□□□□ -1.3
RFX3-203ENST00000381984 PROX2Q3B8N5 592 aa6.92□□□□□ -1.3
RFX3-203ENST00000381984 NYAP1Q6ZVC0 841 aa6.91□□□□□ -1.3
RFX3-203ENST00000381984 JPH4Q96JJ6 628 aa6.91□□□□□ -1.3
RFX3-203ENST00000381984 DCAF8L2P0C7V8 631 aa6.89□□□□□ -1.31
RFX3-203ENST00000381984 PKD2Q13563 968 aa6.89□□□□□ -1.31
RFX3-203ENST00000381984 ZFRQ96KR1 1074 aaKnown RBP6.89□□□□□ -1.31
RFX3-203ENST00000381984 PRKD2Q9BZL6 878 aa6.89□□□□□ -1.31
RFX3-203ENST00000381984 COL9A1P20849 921 aa6.88□□□□□ -1.31
RFX3-203ENST00000381984 LAPTM4BQ86VI4 370 aa6.88□□□□□ -1.31
RFX3-203ENST00000381984 RGL2O15211 777 aa6.87□□□□□ -1.31
RFX3-203ENST00000381984 PPP1R3GB7ZBB8 358 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms