RNA–Protein interactions for RNA: ENST00000381285.8

ITSN1-204, Transcript of intersectin 1, humanhuman

TSL 5 BASIC

Gene ITSN1, Length 6,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-204ENST00000381285 KLHL34Q8N239 644 aa19.72■□□□□ 0.75
ITSN1-204ENST00000381285 HDGFL2Q7Z4V5 671 aaPredicted RBP19.71■□□□□ 0.75
ITSN1-204ENST00000381285 TAF7LQ5H9L4 462 aa19.7■□□□□ 0.74
ITSN1-204ENST00000381285 GORABQ5T7V8 394 aa19.69■□□□□ 0.74
ITSN1-204ENST00000381285 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
ITSN1-204ENST00000381285 B4GALNT3Q6L9W6 998 aa19.68■□□□□ 0.74
ITSN1-204ENST00000381285 GTF2E1P29083 439 aaPredicted RBP19.67■□□□□ 0.74
ITSN1-204ENST00000381285 GOLGA6L6A8MZA4 724 aa19.66■□□□□ 0.74
ITSN1-204ENST00000381285 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
ITSN1-204ENST00000381285 KIF27Q86VH2 1401 aa19.66■□□□□ 0.74
ITSN1-204ENST00000381285 CEP162Q5TB80 1403 aa19.65■□□□□ 0.74
ITSN1-204ENST00000381285 GOLGA3Q08378 1498 aa19.65■□□□□ 0.74
ITSN1-204ENST00000381285 NGDNQ8NEJ9 315 aaKnown RBP19.65■□□□□ 0.74
ITSN1-204ENST00000381285 MEX3CQ5U5Q3 659 aaKnown RBP19.64■□□□□ 0.73
ITSN1-204ENST00000381285 FRAT2O75474 233 aaPredicted RBP19.64■□□□□ 0.73
ITSN1-204ENST00000381285 RTN4Q9NQC3 1192 aaKnown RBP19.64■□□□□ 0.73
ITSN1-204ENST00000381285 DRC7Q8IY82 874 aa19.63■□□□□ 0.73
ITSN1-204ENST00000381285 U2AF1L5P0DN76 240 aaPredicted RBP19.63■□□□□ 0.73
ITSN1-204ENST00000381285 U2AF1Q01081 240 aaKnown RBP eCLIP19.63■□□□□ 0.73
ITSN1-204ENST00000381285 VPS53Q5VIR6 699 aa19.63■□□□□ 0.73
ITSN1-204ENST00000381285 WRNQ14191 1432 aaPredicted RBP eCLIP19.62■□□□□ 0.73
ITSN1-204ENST00000381285 CHMP4BQ9H444 224 aaKnown RBP19.62■□□□□ 0.73
ITSN1-204ENST00000381285 EID1Q9Y6B2 187 aa19.61■□□□□ 0.73
ITSN1-204ENST00000381285 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.6■□□□□ 0.73
ITSN1-204ENST00000381285 MCCP23508 829 aa19.59■□□□□ 0.73
ITSN1-204ENST00000381285 SLC4A10Q6U841 1118 aa19.58■□□□□ 0.73
ITSN1-204ENST00000381285 ANP32EQ9BTT0 268 aa19.58■□□□□ 0.73
ITSN1-204ENST00000381285 PKD2Q13563 968 aa19.58■□□□□ 0.72
ITSN1-204ENST00000381285 MS4A1P11836 297 aa19.58■□□□□ 0.72
ITSN1-204ENST00000381285 KIAA1211Q6ZU35 1233 aa19.57■□□□□ 0.72
ITSN1-204ENST00000381285 TOMM22Q9NS69 142 aa19.57■□□□□ 0.72
ITSN1-204ENST00000381285 KIF3BO15066 747 aa19.57■□□□□ 0.72
ITSN1-204ENST00000381285 EVA1CP58658 441 aa19.57■□□□□ 0.72
ITSN1-204ENST00000381285 HSP90B1P14625 803 aaKnown RBP19.57■□□□□ 0.72
ITSN1-204ENST00000381285 ITPRIPQ8IWB1 547 aa19.57■□□□□ 0.72
ITSN1-204ENST00000381285 NAP1L5Q96NT1 182 aaPredicted RBP19.56■□□□□ 0.72
ITSN1-204ENST00000381285 CREBRFQ8IUR6 639 aa19.56■□□□□ 0.72
ITSN1-204ENST00000381285 HSCBQ8IWL3 235 aa19.55■□□□□ 0.72
ITSN1-204ENST00000381285 RAD21O60216 631 aa19.55■□□□□ 0.72
ITSN1-204ENST00000381285 WWC1Q8IX03 1113 aa19.55■□□□□ 0.72
ITSN1-204ENST00000381285 AMPHP49418 695 aa19.55■□□□□ 0.72
ITSN1-204ENST00000381285 NGEFQ8N5V2 710 aa19.53■□□□□ 0.72
ITSN1-204ENST00000381285 NOL8Q76FK4 1167 aaKnown RBP19.53■□□□□ 0.72
ITSN1-204ENST00000381285 SYTL4Q96C24 671 aaPredicted RBP19.52■□□□□ 0.72
ITSN1-204ENST00000381285 CYB5RLQ6IPT4 315 aa19.51■□□□□ 0.71
ITSN1-204ENST00000381285 NRDCO43847 1150 aa19.5■□□□□ 0.71
ITSN1-204ENST00000381285 RASSF8Q8NHQ8 419 aa19.5■□□□□ 0.71
ITSN1-204ENST00000381285 TRIM6-TRIM34B2RNG4 842 aa19.5■□□□□ 0.71
ITSN1-204ENST00000381285 HNRNPMP52272 730 aaKnown RBP eCLIP19.5■□□□□ 0.71
ITSN1-204ENST00000381285 FBXW7Q969H0 707 aa19.5■□□□□ 0.71
ITSN1-204ENST00000381285 WASHC2CQ9Y4E1 1318 aa19.49■□□□□ 0.71
ITSN1-204ENST00000381285 STK31Q9BXU1 1019 aa19.49■□□□□ 0.71
ITSN1-204ENST00000381285 CUX2O14529 1486 aa19.48■□□□□ 0.71
ITSN1-204ENST00000381285 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
ITSN1-204ENST00000381285 SPAG9O60271 1321 aaKnown RBP19.47■□□□□ 0.71
ITSN1-204ENST00000381285 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
ITSN1-204ENST00000381285 NOC3LQ8WTT2 800 aaKnown RBP19.47■□□□□ 0.71
ITSN1-204ENST00000381285 KIAA2012Q0VF49 1180 aa19.46■□□□□ 0.71
ITSN1-204ENST00000381285 ROCK2O75116 1388 aaKnown RBP19.45■□□□□ 0.7
ITSN1-204ENST00000381285 MARCH6O60337 910 aa19.44■□□□□ 0.7
ITSN1-204ENST00000381285 CARMIL1Q5VZK9 1371 aa19.44■□□□□ 0.7
ITSN1-204ENST00000381285 FBXO3Q9UK99 471 aa19.43■□□□□ 0.7
ITSN1-204ENST00000381285 HSPA5P11021 654 aaKnown RBP19.43■□□□□ 0.7
ITSN1-204ENST00000381285 EFCAB2Q5VUJ9 269 aa19.42■□□□□ 0.7
ITSN1-204ENST00000381285 SAMD1Q6SPF0 538 aaPredicted RBP19.42■□□□□ 0.7
ITSN1-204ENST00000381285 EEA1Q15075 1411 aa19.42■□□□□ 0.7
ITSN1-204ENST00000381285 KRI1Q8N9T8 703 aaKnown RBP19.41■□□□□ 0.7
ITSN1-204ENST00000381285 TRAK1Q9UPV9 953 aa19.41■□□□□ 0.7
ITSN1-204ENST00000381285 CLUAP1Q96AJ1 413 aa19.41■□□□□ 0.7
ITSN1-204ENST00000381285 PPP4R2Q9NY27 417 aa19.41■□□□□ 0.7
ITSN1-204ENST00000381285 IPO8O15397 1037 aaKnown RBP19.41■□□□□ 0.7
ITSN1-204ENST00000381285 FOXD4L1Q9NU39 408 aa19.41■□□□□ 0.7
ITSN1-204ENST00000381285 ARID3AQ99856 593 aa19.39■□□□□ 0.7
ITSN1-204ENST00000381285 NUP155O75694 1391 aa19.39■□□□□ 0.69
ITSN1-204ENST00000381285 TDRD9Q8NDG6 1382 aaKnown RBP19.38■□□□□ 0.69
ITSN1-204ENST00000381285 SMC4Q9NTJ3 1288 aa19.37■□□□□ 0.69
ITSN1-204ENST00000381285 ELL2O00472 640 aaPredicted RBP19.37■□□□□ 0.69
ITSN1-204ENST00000381285 CHAF1AQ13111 956 aaPredicted RBP19.37■□□□□ 0.69
ITSN1-204ENST00000381285 KTN1Q86UP2 1357 aaKnown RBP19.37■□□□□ 0.69
ITSN1-204ENST00000381285 GZF1Q9H116 711 aaPredicted RBP19.37■□□□□ 0.69
ITSN1-204ENST00000381285 CARMIL2Q6F5E8 1435 aa19.36■□□□□ 0.69
ITSN1-204ENST00000381285 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
ITSN1-204ENST00000381285 GPATCH3Q96I76 525 aa19.36■□□□□ 0.69
ITSN1-204ENST00000381285 FOXD4L5Q5VV16 416 aaPredicted RBP19.35■□□□□ 0.69
ITSN1-204ENST00000381285 FOXD4L4Q8WXT5 416 aaPredicted RBP19.35■□□□□ 0.69
ITSN1-204ENST00000381285 RRP7AQ9Y3A4 280 aaKnown RBP19.35■□□□□ 0.69
ITSN1-204ENST00000381285 NECTIN2Q92692 538 aa19.35■□□□□ 0.69
ITSN1-204ENST00000381285 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
ITSN1-204ENST00000381285 TERF2IPQ9NYB0 399 aa19.34■□□□□ 0.69
ITSN1-204ENST00000381285 CALD1Q05682 793 aaKnown RBP19.34■□□□□ 0.69
ITSN1-204ENST00000381285 MFAP1P55081 439 aaKnown RBP19.33■□□□□ 0.68
ITSN1-204ENST00000381285 TRIM34Q9BYJ4 488 aa19.33■□□□□ 0.68
ITSN1-204ENST00000381285 PPP1R1BQ9UD71 204 aaPredicted RBP19.33■□□□□ 0.68
ITSN1-204ENST00000381285 CWC22Q9HCG8 908 aaKnown RBP19.32■□□□□ 0.68
ITSN1-204ENST00000381285 CTDP1Q9Y5B0 961 aaPredicted RBP19.32■□□□□ 0.68
ITSN1-204ENST00000381285 C1orf141Q5JVX7 400 aa19.32■□□□□ 0.68
ITSN1-204ENST00000381285 NOP58Q9Y2X3 529 aaKnown RBP19.31■□□□□ 0.68
ITSN1-204ENST00000381285 SLKQ9H2G2 1235 aaPredicted RBP19.31■□□□□ 0.68
ITSN1-204ENST00000381285 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
ITSN1-204ENST00000381285 EIF2S2P20042 333 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms