RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 CYB5RLQ6IPT4 315 aa29.33■■■□□ 2.29
CCM2-202ENST00000381112 PREX2Q70Z35 1606 aa29.32■■■□□ 2.28
CCM2-202ENST00000381112 ZNF777Q9ULD5 760 aaPredicted RBP29.32■■■□□ 2.28
CCM2-202ENST00000381112 ABCC5O15440 1437 aa29.31■■■□□ 2.28
CCM2-202ENST00000381112 DAPK1P53355 1430 aa29.31■■■□□ 2.28
CCM2-202ENST00000381112 RAB3GAP2Q9H2M9 1393 aa29.3■■■□□ 2.28
CCM2-202ENST00000381112 DNMT1P26358 1616 aaKnown RBP29.29■■■□□ 2.28
CCM2-202ENST00000381112 HFM1A2PYH4 1435 aa29.28■■■□□ 2.28
CCM2-202ENST00000381112 CDC42BPBQ9Y5S2 1711 aa29.27■■■□□ 2.28
CCM2-202ENST00000381112 PLCH2O75038 1416 aa29.26■■■□□ 2.27
CCM2-202ENST00000381112 ZEB1P37275 1124 aaPredicted RBP29.25■■■□□ 2.27
CCM2-202ENST00000381112 AKNAQ7Z591 1439 aa29.23■■■□□ 2.27
CCM2-202ENST00000381112 ARHGAP5Q13017 1502 aa29.23■■■□□ 2.27
CCM2-202ENST00000381112 MYO5CQ9NQX4 1742 aa29.23■■■□□ 2.27
CCM2-202ENST00000381112 CHIC2Q9UKJ5 165 aa29.23■■■□□ 2.27
CCM2-202ENST00000381112 NAIPQ13075 1403 aa29.22■■■□□ 2.27
CCM2-202ENST00000381112 SAMD9LQ8IVG5 1584 aa29.21■■■□□ 2.27
CCM2-202ENST00000381112 ROCK1Q13464 1354 aa29.19■■■□□ 2.26
CCM2-202ENST00000381112 ABCA9Q8IUA7 1624 aa29.18■■■□□ 2.26
CCM2-202ENST00000381112 MBD5Q9P267 1494 aa29.18■■■□□ 2.26
CCM2-202ENST00000381112 DHX57Q6P158 1386 aaKnown RBP29.18■■■□□ 2.26
CCM2-202ENST00000381112 ARAP3Q8WWN8 1544 aa29.17■■■□□ 2.26
CCM2-202ENST00000381112 EFCAB2Q5VUJ9 269 aa29.15■■■□□ 2.26
CCM2-202ENST00000381112 RRP7BPQ9NSQ0 103 aa29.15■■■□□ 2.26
CCM2-202ENST00000381112 MAPKBP1O60336 1514 aa29.14■■■□□ 2.26
CCM2-202ENST00000381112 ARHGEF5Q12774 1597 aa29.14■■■□□ 2.26
CCM2-202ENST00000381112 HNRNPMP52272 730 aaKnown RBP eCLIP29.14■■■□□ 2.262e-6■■■□□ 15.7
CCM2-202ENST00000381112 PLEKHH2Q8IVE3 1493 aa29.13■■■□□ 2.25
CCM2-202ENST00000381112 KIAA1107Q9UPP5 1409 aa29.13■■■□□ 2.25
CCM2-202ENST00000381112 SHANK2Q9UPX8 1470 aa29.11■■■□□ 2.25
CCM2-202ENST00000381112 CROCC2H7BZ55 1655 aa29.11■■■□□ 2.25
CCM2-202ENST00000381112 RSPH4AQ5TD94 716 aa29.1■■■□□ 2.25
CCM2-202ENST00000381112 ADGRL2O95490 1459 aa29.1■■■□□ 2.25
CCM2-202ENST00000381112 GCC2Q8IWJ2 1684 aa29.09■■■□□ 2.25
CCM2-202ENST00000381112 SYCP2Q9BX26 1530 aa29.09■■■□□ 2.25
CCM2-202ENST00000381112 CCDC141Q6ZP82 1450 aa29.08■■■□□ 2.25
CCM2-202ENST00000381112 NCOA1Q15788 1441 aa29.08■■■□□ 2.25
CCM2-202ENST00000381112 C9orf84Q5VXU9 1444 aa29.06■■■□□ 2.24
CCM2-202ENST00000381112 TSPY4P0CV99 314 aa29.05■■■□□ 2.24
CCM2-202ENST00000381112 TSPY10P0CW01 314 aa29.05■■■□□ 2.24
CCM2-202ENST00000381112 CLSPNQ9HAW4 1339 aa29.05■■■□□ 2.24
CCM2-202ENST00000381112 ARHGEF12Q9NZN5 1544 aa29.04■■■□□ 2.24
CCM2-202ENST00000381112 ANKRD30AQ9BXX3 1397 aa29.03■■■□□ 2.24
CCM2-202ENST00000381112 ABCC1P33527 1531 aa29.03■■■□□ 2.24
CCM2-202ENST00000381112 ADGBQ8N7X0 1667 aa29.02■■■□□ 2.24
CCM2-202ENST00000381112 FANCAO15360 1455 aa29.02■■■□□ 2.24
CCM2-202ENST00000381112 CD109Q6YHK3 1445 aa29■■■□□ 2.23
CCM2-202ENST00000381112 KDM6BO15054 1643 aa28.98■■■□□ 2.23
CCM2-202ENST00000381112 MAST1Q9Y2H9 1570 aa28.95■■■□□ 2.22
CCM2-202ENST00000381112 TRAPPC8Q9Y2L5 1435 aa28.94■■■□□ 2.22
CCM2-202ENST00000381112 GLI2P10070 1586 aa28.92■■■□□ 2.22
CCM2-202ENST00000381112 ACIN1Q9UKV3 1341 aaKnown RBP28.92■■■□□ 2.22
CCM2-202ENST00000381112 KIF15Q9NS87 1388 aa28.89■■■□□ 2.22
CCM2-202ENST00000381112 ADGRL1O94910 1474 aa28.89■■■□□ 2.22
CCM2-202ENST00000381112 ANKRD50Q9ULJ7 1429 aa28.88■■■□□ 2.21
CCM2-202ENST00000381112 SCAPERQ9BY12 1400 aa28.87■■■□□ 2.21
CCM2-202ENST00000381112 AFAP1Q8N556 730 aa28.85■■■□□ 2.21
CCM2-202ENST00000381112 CFAP74Q9C0B2 1584 aa28.85■■■□□ 2.21
CCM2-202ENST00000381112 MAP3K4Q9Y6R4 1608 aa28.84■■■□□ 2.21
CCM2-202ENST00000381112 DIP2BQ9P265 1576 aa28.84■■■□□ 2.21
CCM2-202ENST00000381112 TRIM52Q96A61 297 aa28.83■■■□□ 2.21
CCM2-202ENST00000381112 PLXNC1O60486 1568 aa28.82■■■□□ 2.2
CCM2-202ENST00000381112 FAM69CQ0P6D2 419 aa28.82■■■□□ 2.2
CCM2-202ENST00000381112 RTEL1-TNFRSF6BF6WH68 1400 aa28.81■■■□□ 2.2
CCM2-202ENST00000381112 NEO1Q92859 1461 aa28.81■■■□□ 2.2
CCM2-202ENST00000381112 SPAG9O60271 1321 aaKnown RBP28.8■■■□□ 2.2
CCM2-202ENST00000381112 ZFYVE16Q7Z3T8 1539 aa28.76■■■□□ 2.19
CCM2-202ENST00000381112 DENND4BO75064 1496 aaPredicted RBP28.76■■■□□ 2.19
CCM2-202ENST00000381112 MPHOSPH9Q99550 1183 aa28.75■■■□□ 2.19
CCM2-202ENST00000381112 ZNF518AQ6AHZ1 1483 aa28.73■■■□□ 2.19
CCM2-202ENST00000381112 DUOX2Q9NRD8 1548 aa28.73■■■□□ 2.19
CCM2-202ENST00000381112 POGZQ7Z3K3 1410 aa28.72■■■□□ 2.19
CCM2-202ENST00000381112 INO80Q9ULG1 1556 aaPredicted RBP28.71■■■□□ 2.19
CCM2-202ENST00000381112 ATP7AQ04656 1500 aa28.69■■■□□ 2.18
CCM2-202ENST00000381112 PZPP20742 1482 aa28.69■■■□□ 2.18
CCM2-202ENST00000381112 ERBINQ96RT1 1412 aa28.67■■■□□ 2.18
CCM2-202ENST00000381112 KDM5CP41229 1560 aa28.66■■■□□ 2.18
CCM2-202ENST00000381112 SIN3AQ96ST3 1273 aa28.66■■■□□ 2.18
CCM2-202ENST00000381112 SLC4A1APQ9BWU0 796 aaKnown RBP28.66■■■□□ 2.18
CCM2-202ENST00000381112 KDM5DQ9BY66 1539 aa28.65■■■□□ 2.18
CCM2-202ENST00000381112 NUP155O75694 1391 aa28.64■■■□□ 2.18
CCM2-202ENST00000381112 MLH3Q9UHC1 1453 aa28.61■■■□□ 2.17
CCM2-202ENST00000381112 DNAJC5Q9H3Z4 198 aa28.61■■■□□ 2.17
CCM2-202ENST00000381112 TEX14Q8IWB6 1497 aa28.6■■■□□ 2.17
CCM2-202ENST00000381112 PPRC1Q5VV67 1664 aaKnown RBP28.6■■■□□ 2.17
CCM2-202ENST00000381112 RAPGEF3O95398 923 aa28.59■■■□□ 2.17
CCM2-202ENST00000381112 NEUROD1Q13562 356 aa28.59■■■□□ 2.17
CCM2-202ENST00000381112 MYT1LQ9UL68 1186 aa28.59■■■□□ 2.17
CCM2-202ENST00000381112 KIDINS220Q9ULH0 1771 aa28.58■■■□□ 2.17
CCM2-202ENST00000381112 KIF13AQ9H1H9 1805 aa28.58■■■□□ 2.17
CCM2-202ENST00000381112 UNC13BO14795 1591 aa28.58■■■□□ 2.16
CCM2-202ENST00000381112 FOXD1Q16676 465 aa28.57■■■□□ 2.16
CCM2-202ENST00000381112 DHX29Q7Z478 1369 aaKnown RBP28.55■■■□□ 2.16
CCM2-202ENST00000381112 TIMELESSQ9UNS1 1208 aa28.55■■■□□ 2.16
CCM2-202ENST00000381112 ANKRD30BQ9BXX2 1392 aa28.54■■■□□ 2.16
CCM2-202ENST00000381112 HECW2Q9P2P5 1572 aa28.54■■■□□ 2.16
CCM2-202ENST00000381112 MAGI2Q86UL8 1455 aa28.54■■■□□ 2.16
CCM2-202ENST00000381112 PKD2Q13563 968 aa28.52■■■□□ 2.16
CCM2-202ENST00000381112 RICTORQ6R327 1708 aa28.52■■■□□ 2.16
CCM2-202ENST00000381112 TSPOAP1O95153 1857 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms