RNA–Protein interactions for RNA: ENST00000381032.5

VCX3B-202, Transcript of variable charge X-linked 3B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene VCX3B, Length 1,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-202ENST00000381032 LMTK3Q96Q04 1460 aa25.6■■□□□ 1.69
VCX3B-202ENST00000381032 PLCH2O75038 1416 aa25.59■■□□□ 1.69
VCX3B-202ENST00000381032 POGZQ7Z3K3 1410 aa25.58■■□□□ 1.69
VCX3B-202ENST00000381032 ATP1B4Q9UN42 357 aaPredicted RBP25.58■■□□□ 1.69
VCX3B-202ENST00000381032 FER1L4A9Z1Z3 1794 aa25.58■■□□□ 1.69
VCX3B-202ENST00000381032 SCAPERQ9BY12 1400 aa25.56■■□□□ 1.68
VCX3B-202ENST00000381032 MAGI2Q86UL8 1455 aa25.53■■□□□ 1.68
VCX3B-202ENST00000381032 PLPPR3Q6T4P5 718 aa25.5■■□□□ 1.67
VCX3B-202ENST00000381032 CDC42BPBQ9Y5S2 1711 aa25.5■■□□□ 1.67
VCX3B-202ENST00000381032 TROQ12816 1431 aaPredicted RBP25.48■■□□□ 1.67
VCX3B-202ENST00000381032 MLECQ14165 292 aa25.47■■□□□ 1.67
VCX3B-202ENST00000381032 ARHGAP5Q13017 1502 aa25.47■■□□□ 1.67
VCX3B-202ENST00000381032 KDM5CP41229 1560 aa25.44■■□□□ 1.66
VCX3B-202ENST00000381032 ARHGEF12Q9NZN5 1544 aa25.43■■□□□ 1.66
VCX3B-202ENST00000381032 EFCAB2Q5VUJ9 269 aa25.43■■□□□ 1.66
VCX3B-202ENST00000381032 ATP10AO60312 1499 aa25.42■■□□□ 1.66
VCX3B-202ENST00000381032 HSPA2P54652 639 aa25.42■■□□□ 1.66
VCX3B-202ENST00000381032 C9orf84Q5VXU9 1444 aa25.42■■□□□ 1.66
VCX3B-202ENST00000381032 PREX2Q70Z35 1606 aa25.41■■□□□ 1.66
VCX3B-202ENST00000381032 CLIP1P30622 1438 aa25.4■■□□□ 1.66
VCX3B-202ENST00000381032 CDK11AQ9UQ88 783 aaPredicted RBP25.4■■□□□ 1.66
VCX3B-202ENST00000381032 ZNF518AQ6AHZ1 1483 aa25.4■■□□□ 1.66
VCX3B-202ENST00000381032 DIP2CQ9Y2E4 1556 aa25.39■■□□□ 1.65
VCX3B-202ENST00000381032 ABCA6Q8N139 1617 aa25.38■■□□□ 1.65
VCX3B-202ENST00000381032 CDC42BPAQ5VT25 1732 aa25.38■■□□□ 1.65
VCX3B-202ENST00000381032 ITSN2Q9NZM3 1697 aa25.37■■□□□ 1.65
VCX3B-202ENST00000381032 AFAP1Q8N556 730 aa25.35■■□□□ 1.65
VCX3B-202ENST00000381032 FBXO41Q8TF61 875 aa25.35■■□□□ 1.65
VCX3B-202ENST00000381032 CASKIN1Q8WXD9 1431 aa25.35■■□□□ 1.65
VCX3B-202ENST00000381032 ABCC1P33527 1531 aa25.34■■□□□ 1.65
VCX3B-202ENST00000381032 PREX1Q8TCU6 1659 aa25.34■■□□□ 1.65
VCX3B-202ENST00000381032 CCDC18Q5T9S5 1454 aa25.33■■□□□ 1.65
VCX3B-202ENST00000381032 TRAPPC8Q9Y2L5 1435 aa25.29■■□□□ 1.64
VCX3B-202ENST00000381032 REREQ9P2R6 1566 aa25.29■■□□□ 1.64
VCX3B-202ENST00000381032 CEBPAP49715 358 aaPredicted RBP25.28■■□□□ 1.64
VCX3B-202ENST00000381032 KIDINS220Q9ULH0 1771 aa25.28■■□□□ 1.64
VCX3B-202ENST00000381032 FYCO1Q9BQS8 1478 aa25.27■■□□□ 1.64
VCX3B-202ENST00000381032 C3P01024 1663 aa25.26■■□□□ 1.63
VCX3B-202ENST00000381032 MLH3Q9UHC1 1453 aa25.25■■□□□ 1.63
VCX3B-202ENST00000381032 MYT1LQ9UL68 1186 aa25.24■■□□□ 1.63
VCX3B-202ENST00000381032 SAMD9LQ8IVG5 1584 aa25.23■■□□□ 1.63
VCX3B-202ENST00000381032 STRCQ7RTU9 1775 aa25.23■■□□□ 1.63
VCX3B-202ENST00000381032 SETD1BQ9UPS6 1966 aaKnown RBP25.22■■□□□ 1.63
VCX3B-202ENST00000381032 AGLP35573 1532 aa25.18■■□□□ 1.62
VCX3B-202ENST00000381032 SYCP2Q9BX26 1530 aa25.17■■□□□ 1.62
VCX3B-202ENST00000381032 GPATCH8Q9UKJ3 1502 aaKnown RBP25.14■■□□□ 1.62
VCX3B-202ENST00000381032 SUPT6HQ7KZ85 1726 aaKnown RBP25.12■■□□□ 1.61
VCX3B-202ENST00000381032 UHRF1BP1Q6BDS2 1440 aa25.12■■□□□ 1.61
VCX3B-202ENST00000381032 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
VCX3B-202ENST00000381032 INO80Q9ULG1 1556 aaPredicted RBP25.08■■□□□ 1.61
VCX3B-202ENST00000381032 CERKQ8TCT0 537 aa25.07■■□□□ 1.6
VCX3B-202ENST00000381032 ATP7AQ04656 1500 aa25.06■■□□□ 1.6
VCX3B-202ENST00000381032 MROH2AA6NES4 1674 aa25.05■■□□□ 1.6
VCX3B-202ENST00000381032 HNRNPMP52272 730 aaKnown RBP eCLIP25.04■■□□□ 1.6
VCX3B-202ENST00000381032 PLXNC1O60486 1568 aa25.03■■□□□ 1.6
VCX3B-202ENST00000381032 TIAM1Q13009 1591 aa25.02■■□□□ 1.6
VCX3B-202ENST00000381032 CLTCQ00610 1675 aaKnown RBP25.02■■□□□ 1.6
VCX3B-202ENST00000381032 SPAG9O60271 1321 aaKnown RBP25■■□□□ 1.59
VCX3B-202ENST00000381032 CNTLNQ9NXG0 1405 aa24.99■■□□□ 1.59
VCX3B-202ENST00000381032 MTUS2Q5JR59 1369 aa24.98■■□□□ 1.59
VCX3B-202ENST00000381032 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
VCX3B-202ENST00000381032 ESF1Q9H501 851 aaKnown RBP24.98■■□□□ 1.59
VCX3B-202ENST00000381032 KIAA1107Q9UPP5 1409 aa24.97■■□□□ 1.59
VCX3B-202ENST00000381032 CFDP1Q9UEE9 299 aaPredicted RBP24.97■■□□□ 1.59
VCX3B-202ENST00000381032 EHBP1L1Q8N3D4 1523 aa24.96■■□□□ 1.59
VCX3B-202ENST00000381032 PLEKHH2Q8IVE3 1493 aa24.96■■□□□ 1.59
VCX3B-202ENST00000381032 ADGBQ8N7X0 1667 aa24.95■■□□□ 1.58
VCX3B-202ENST00000381032 A2MP01023 1474 aa24.95■■□□□ 1.58
VCX3B-202ENST00000381032 ZNF644Q9H582 1327 aaPredicted RBP24.93■■□□□ 1.58
VCX3B-202ENST00000381032 MYO3AQ8NEV4 1616 aa24.92■■□□□ 1.58
VCX3B-202ENST00000381032 PTPRTO14522 1441 aa24.92■■□□□ 1.58
VCX3B-202ENST00000381032 NCOA1Q15788 1441 aa24.92■■□□□ 1.58
VCX3B-202ENST00000381032 CAMSAP1Q5T5Y3 1602 aa24.91■■□□□ 1.58
VCX3B-202ENST00000381032 ZMYM3Q14202 1370 aa24.91■■□□□ 1.58
VCX3B-202ENST00000381032 ZNF142P52746 1687 aaPredicted RBP24.91■■□□□ 1.58
VCX3B-202ENST00000381032 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
VCX3B-202ENST00000381032 DMRT2Q9Y5R5 561 aa24.9■■□□□ 1.58
VCX3B-202ENST00000381032 NPATQ14207 1427 aa24.89■■□□□ 1.58
VCX3B-202ENST00000381032 LTBP4Q8N2S1 1624 aa24.89■■□□□ 1.57
VCX3B-202ENST00000381032 MBD5Q9P267 1494 aa24.89■■□□□ 1.57
VCX3B-202ENST00000381032 GGT6Q6P531 493 aa24.83■■□□□ 1.57
VCX3B-202ENST00000381032 PTPRKQ15262 1439 aa24.83■■□□□ 1.57
VCX3B-202ENST00000381032 CEP170BQ9Y4F5 1589 aaPredicted RBP24.83■■□□□ 1.57
VCX3B-202ENST00000381032 NCOA2Q15596 1464 aa24.8■■□□□ 1.56
VCX3B-202ENST00000381032 CAMSAP2Q08AD1 1489 aa24.79■■□□□ 1.56
VCX3B-202ENST00000381032 NCKAP5LQ9HCH0 1330 aa24.77■■□□□ 1.56
VCX3B-202ENST00000381032 RTEL1-TNFRSF6BF6WH68 1400 aa24.76■■□□□ 1.55
VCX3B-202ENST00000381032 CCDC141Q6ZP82 1450 aa24.75■■□□□ 1.55
VCX3B-202ENST00000381032 PLA2R1Q13018 1463 aa24.73■■□□□ 1.55
VCX3B-202ENST00000381032 TCOF1Q13428 1488 aaKnown RBP24.72■■□□□ 1.55
VCX3B-202ENST00000381032 DNMT1P26358 1616 aaKnown RBP24.72■■□□□ 1.55
VCX3B-202ENST00000381032 DHX29Q7Z478 1369 aaKnown RBP24.71■■□□□ 1.55
VCX3B-202ENST00000381032 POLR1AO95602 1720 aaPredicted RBP24.69■■□□□ 1.54
VCX3B-202ENST00000381032 ZNF335Q9H4Z2 1342 aaPredicted RBP24.69■■□□□ 1.54
VCX3B-202ENST00000381032 IQSEC2Q5JU85 1478 aa24.69■■□□□ 1.54
VCX3B-202ENST00000381032 ARHGEF5Q12774 1597 aa24.68■■□□□ 1.54
VCX3B-202ENST00000381032 KDM5DQ9BY66 1539 aa24.68■■□□□ 1.54
VCX3B-202ENST00000381032 A2ML1A8K2U0 1454 aa24.67■■□□□ 1.54
VCX3B-202ENST00000381032 KIF3BO15066 747 aa24.65■■□□□ 1.54
VCX3B-202ENST00000381032 PPP6R1Q9UPN7 881 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms