RNA–Protein interactions for RNA: ENST00000381032.5

VCX3B-202, Transcript of variable charge X-linked 3B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene VCX3B, Length 1,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-202ENST00000381032 NISCHQ9Y2I1 1504 aa39.02■■■■□ 3.84
VCX3B-202ENST00000381032 ABCC9O60706 1549 aa35.18■■■■□ 3.22
VCX3B-202ENST00000381032 CCDC180Q9P1Z9 1646 aa35.1■■■■□ 3.21
VCX3B-202ENST00000381032 RB1CC1Q8TDY2 1594 aa33.39■■■□□ 2.94
VCX3B-202ENST00000381032 NACADO15069 1562 aa33.13■■■□□ 2.89
VCX3B-202ENST00000381032 DNAJC5BQ9UF47 199 aa33.08■■■□□ 2.89
VCX3B-202ENST00000381032 DCAF8L2P0C7V8 631 aa32.88■■■□□ 2.85
VCX3B-202ENST00000381032 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
VCX3B-202ENST00000381032 PABPN1Q86U42 306 aaKnown RBP eCLIP32.7■■■□□ 2.83
VCX3B-202ENST00000381032 MYO15BQ96JP2 1530 aa32.59■■■□□ 2.81
VCX3B-202ENST00000381032 BICRAQ9NZM4 1560 aa32.53■■■□□ 2.8
VCX3B-202ENST00000381032 ZCCHC6Q5VYS8 1495 aaKnown RBP32.35■■■□□ 2.77
VCX3B-202ENST00000381032 DCAF1Q9Y4B6 1507 aa32.17■■■□□ 2.74
VCX3B-202ENST00000381032 SCRIBQ14160 1630 aa32.04■■■□□ 2.72
VCX3B-202ENST00000381032 SHROOM4Q9ULL8 1493 aa31.91■■■□□ 2.7
VCX3B-202ENST00000381032 CC2D2AQ9P2K1 1620 aa31.8■■■□□ 2.68
VCX3B-202ENST00000381032 EIF4G1Q04637 1599 aaKnown RBP31.69■■■□□ 2.66
VCX3B-202ENST00000381032 CECR2Q9BXF3 1484 aa31.65■■■□□ 2.66
VCX3B-202ENST00000381032 NCAPD3P42695 1498 aa30.56■■■□□ 2.48
VCX3B-202ENST00000381032 SMARCA4P51532 1647 aa30.52■■■□□ 2.48
VCX3B-202ENST00000381032 ATAD2BQ9ULI0 1458 aa30.5■■■□□ 2.47
VCX3B-202ENST00000381032 SMARCA2P51531 1590 aa30.39■■■□□ 2.46
VCX3B-202ENST00000381032 HMGXB3Q12766 1538 aa30.38■■■□□ 2.45
VCX3B-202ENST00000381032 DNAJC5Q9H3Z4 198 aa30.32■■■□□ 2.44
VCX3B-202ENST00000381032 ERCC6Q03468 1493 aa30.31■■■□□ 2.44
VCX3B-202ENST00000381032 BAZ1AQ9NRL2 1556 aaPredicted RBP30.28■■■□□ 2.44
VCX3B-202ENST00000381032 CUX2O14529 1486 aa30.27■■■□□ 2.44
VCX3B-202ENST00000381032 NESP48681 1621 aa30.24■■■□□ 2.43
VCX3B-202ENST00000381032 BAZ1BQ9UIG0 1483 aaKnown RBP30.19■■■□□ 2.42
VCX3B-202ENST00000381032 PEG3Q9GZU2 1588 aa30.17■■■□□ 2.42
VCX3B-202ENST00000381032 MROH2BQ7Z745 1585 aa30.12■■■□□ 2.41
VCX3B-202ENST00000381032 THOC2Q8NI27 1593 aaKnown RBP29.98■■■□□ 2.39
VCX3B-202ENST00000381032 LAMC3Q9Y6N6 1575 aa29.93■■■□□ 2.38
VCX3B-202ENST00000381032 KIF21AQ7Z4S6 1674 aa29.92■■■□□ 2.38
VCX3B-202ENST00000381032 WIZO95785 1651 aa29.81■■■□□ 2.36
VCX3B-202ENST00000381032 PDS5BQ9NTI5 1447 aa29.67■■■□□ 2.34
VCX3B-202ENST00000381032 CADPSQ9ULU8 1353 aa29.61■■■□□ 2.33
VCX3B-202ENST00000381032 MRC2Q9UBG0 1479 aa29.51■■■□□ 2.31
VCX3B-202ENST00000381032 WDR62O43379 1518 aa29.48■■■□□ 2.31
VCX3B-202ENST00000381032 RSF1Q96T23 1441 aaPredicted RBP29.4■■■□□ 2.3
VCX3B-202ENST00000381032 CEP164Q9UPV0 1460 aa29.37■■■□□ 2.29
VCX3B-202ENST00000381032 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
VCX3B-202ENST00000381032 FANCD2Q9BXW9 1451 aa29.33■■■□□ 2.29
VCX3B-202ENST00000381032 CFTRP13569 1480 aa29.29■■■□□ 2.28
VCX3B-202ENST00000381032 PRDM2Q13029 1718 aa29.17■■■□□ 2.26
VCX3B-202ENST00000381032 URB2Q14146 1524 aaKnown RBP29.15■■■□□ 2.26
VCX3B-202ENST00000381032 TRIM41Q8WV44 630 aa29.01■■■□□ 2.23
VCX3B-202ENST00000381032 CCDC88BA6NC98 1476 aa28.99■■■□□ 2.23
VCX3B-202ENST00000381032 ZNF608Q9ULD9 1512 aaPredicted RBP28.82■■■□□ 2.2
VCX3B-202ENST00000381032 TOPBP1Q92547 1522 aa28.79■■■□□ 2.2
VCX3B-202ENST00000381032 OSCARQ8IYS5 282 aa28.79■■■□□ 2.2
VCX3B-202ENST00000381032 IFT140Q96RY7 1462 aa28.75■■■□□ 2.19
VCX3B-202ENST00000381032 EIF4G3O43432 1585 aaKnown RBP28.69■■■□□ 2.18
VCX3B-202ENST00000381032 DNMBPQ6XZF7 1577 aa28.69■■■□□ 2.18
VCX3B-202ENST00000381032 RIMBP3CA6NJZ7 1639 aa28.64■■■□□ 2.18
VCX3B-202ENST00000381032 RIMBP3BA6NNM3 1639 aa28.64■■■□□ 2.18
VCX3B-202ENST00000381032 RIMBP3Q9UFD9 1639 aa28.64■■■□□ 2.18
VCX3B-202ENST00000381032 ABCC8Q09428 1581 aa28.6■■■□□ 2.17
VCX3B-202ENST00000381032 TARBP1Q13395 1621 aaKnown RBP28.6■■■□□ 2.17
VCX3B-202ENST00000381032 CHD1O14646 1710 aa28.55■■■□□ 2.16
VCX3B-202ENST00000381032 AQRO60306 1485 aaKnown RBP eCLIP28.5■■■□□ 2.15
VCX3B-202ENST00000381032 POLA1P09884 1462 aaPredicted RBP28.5■■■□□ 2.15
VCX3B-202ENST00000381032 ARHGEF11O15085 1522 aa28.48■■■□□ 2.15
VCX3B-202ENST00000381032 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
VCX3B-202ENST00000381032 FGD5Q6ZNL6 1462 aa28.31■■■□□ 2.12
VCX3B-202ENST00000381032 CUX1P39880 1505 aa28.31■■■□□ 2.12
VCX3B-202ENST00000381032 SOGA1O94964 1423 aa28.29■■■□□ 2.12
VCX3B-202ENST00000381032 TDRD9Q8NDG6 1382 aaKnown RBP28.28■■■□□ 2.12
VCX3B-202ENST00000381032 FBLN2P98095 1184 aa28.25■■■□□ 2.11
VCX3B-202ENST00000381032 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
VCX3B-202ENST00000381032 ARAP1Q96P48 1450 aa28.22■■■□□ 2.11
VCX3B-202ENST00000381032 WDR97A6NE52 1622 aa28.22■■■□□ 2.11
VCX3B-202ENST00000381032 CYB5RLQ6IPT4 315 aa28.19■■■□□ 2.1
VCX3B-202ENST00000381032 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
VCX3B-202ENST00000381032 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
VCX3B-202ENST00000381032 MAGI1Q96QZ7 1491 aaPredicted RBP28.08■■■□□ 2.09
VCX3B-202ENST00000381032 GRIN2BQ13224 1484 aa28.07■■■□□ 2.08
VCX3B-202ENST00000381032 SYNJ1O43426 1573 aa28.05■■■□□ 2.08
VCX3B-202ENST00000381032 ABCA5Q8WWZ7 1642 aa28■■■□□ 2.07
VCX3B-202ENST00000381032 SUPT5HO00267 1087 aaKnown RBP28■■■□□ 2.07
VCX3B-202ENST00000381032 SYNJ2O15056 1496 aa28■■■□□ 2.07
VCX3B-202ENST00000381032 CHMP7Q8WUX9 453 aaPredicted RBP27.99■■■□□ 2.07
VCX3B-202ENST00000381032 GAPVD1Q14C86 1478 aa27.98■■■□□ 2.07
VCX3B-202ENST00000381032 ABCA10Q8WWZ4 1543 aa27.95■■■□□ 2.06
VCX3B-202ENST00000381032 TRHP20396 242 aaPredicted RBP27.88■■■□□ 2.05
VCX3B-202ENST00000381032 BIVM-ERCC5R4GMW8 1640 aa27.85■■■□□ 2.05
VCX3B-202ENST00000381032 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
VCX3B-202ENST00000381032 ADAMTS12P58397 1594 aa27.8■■■□□ 2.04
VCX3B-202ENST00000381032 ERCC6L2Q5T890 1561 aa27.76■■■□□ 2.03
VCX3B-202ENST00000381032 WRNQ14191 1432 aaPredicted RBP eCLIP27.75■■■□□ 2.03
VCX3B-202ENST00000381032 GRIN2AQ12879 1464 aa27.75■■■□□ 2.03
VCX3B-202ENST00000381032 CEP170Q5SW79 1584 aa27.73■■■□□ 2.03
VCX3B-202ENST00000381032 NUP160Q12769 1436 aa27.65■■■□□ 2.02
VCX3B-202ENST00000381032 SHROOM2Q13796 1616 aa27.61■■■□□ 2.01
VCX3B-202ENST00000381032 FHAD1B1AJZ9 1412 aa27.58■■■□□ 2.01
VCX3B-202ENST00000381032 ERICH3Q5RHP9 1530 aa27.58■■■□□ 2.01
VCX3B-202ENST00000381032 RUSC2Q8N2Y8 1516 aa27.41■■□□□ 1.98
VCX3B-202ENST00000381032 KIF13AQ9H1H9 1805 aa27.37■■□□□ 1.97
VCX3B-202ENST00000381032 PRG4Q92954 1404 aaPredicted RBP27.37■■□□□ 1.97
VCX3B-202ENST00000381032 JPH4Q96JJ6 628 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms