RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 KANK1Q14678 1352 aa23.52■■□□□ 1.36
UBL3-201ENST00000380680 PPP4R2Q9NY27 417 aa23.52■■□□□ 1.36
UBL3-201ENST00000380680 NCOA2Q15596 1464 aa23.5■■□□□ 1.35
UBL3-201ENST00000380680 ROCK2O75116 1388 aaKnown RBP23.5■■□□□ 1.35
UBL3-201ENST00000380680 B4GALNT3Q6L9W6 998 aa23.49■■□□□ 1.35
UBL3-201ENST00000380680 TNNT2P45379 298 aaPredicted RBP23.48■■□□□ 1.35
UBL3-201ENST00000380680 FYCO1Q9BQS8 1478 aa23.48■■□□□ 1.35
UBL3-201ENST00000380680 NEUROD2Q15784 382 aa23.47■■□□□ 1.35
UBL3-201ENST00000380680 GRIN2BQ13224 1484 aa23.47■■□□□ 1.35
UBL3-201ENST00000380680 KIF3BO15066 747 aa23.46■■□□□ 1.35
UBL3-201ENST00000380680 UACAQ9BZF9 1416 aa23.45■■□□□ 1.35
UBL3-201ENST00000380680 CFAP53Q96M91 514 aa23.43■■□□□ 1.34
UBL3-201ENST00000380680 SPAG9O60271 1321 aaKnown RBP23.43■■□□□ 1.34
UBL3-201ENST00000380680 DNMBPQ6XZF7 1577 aa23.42■■□□□ 1.34
UBL3-201ENST00000380680 ST20-MTHFSA0A0A6YYL1 179 aa23.4■■□□□ 1.34
UBL3-201ENST00000380680 ARID4BQ4LE39 1312 aaPredicted RBP23.4■■□□□ 1.34
UBL3-201ENST00000380680 TIAM1Q13009 1591 aa23.4■■□□□ 1.34
UBL3-201ENST00000380680 POGKQ9P215 609 aa23.4■■□□□ 1.34
UBL3-201ENST00000380680 PPM1GO15355 546 aaPredicted RBP23.39■■□□□ 1.33
UBL3-201ENST00000380680 EFCAB5A4FU69 1503 aa23.38■■□□□ 1.33
UBL3-201ENST00000380680 ABCA10Q8WWZ4 1543 aa23.36■■□□□ 1.33
UBL3-201ENST00000380680 NBR1Q14596 966 aa23.36■■□□□ 1.33
UBL3-201ENST00000380680 UPF2Q9HAU5 1272 aaKnown RBP23.36■■□□□ 1.33
UBL3-201ENST00000380680 KTN1Q86UP2 1357 aaKnown RBP23.36■■□□□ 1.33
UBL3-201ENST00000380680 SAFB2Q14151 953 aaKnown RBP eCLIP23.36■■□□□ 1.33
UBL3-201ENST00000380680 PRKRIP1Q9H875 184 aaPredicted RBP23.34■■□□□ 1.33
UBL3-201ENST00000380680 MLECQ14165 292 aa23.33■■□□□ 1.33
UBL3-201ENST00000380680 MRC2Q9UBG0 1479 aa23.33■■□□□ 1.32
UBL3-201ENST00000380680 PRDM2Q13029 1718 aa23.33■■□□□ 1.32
UBL3-201ENST00000380680 RALBP1Q15311 655 aa23.33■■□□□ 1.32
UBL3-201ENST00000380680 CCDC144AA2RUR9 1427 aa23.3■■□□□ 1.32
UBL3-201ENST00000380680 USP47Q96K76 1375 aa23.28■■□□□ 1.32
UBL3-201ENST00000380680 STK26Q9P289 416 aa23.26■■□□□ 1.31
UBL3-201ENST00000380680 BIVM-ERCC5R4GMW8 1640 aa23.25■■□□□ 1.31
UBL3-201ENST00000380680 SRPK2P78362 688 aaKnown RBP23.25■■□□□ 1.31
UBL3-201ENST00000380680 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
UBL3-201ENST00000380680 KIF15Q9NS87 1388 aa23.25■■□□□ 1.31
UBL3-201ENST00000380680 NUDCQ9Y266 331 aa23.24■■□□□ 1.31
UBL3-201ENST00000380680 U2SURPO15042 1029 aaKnown RBP23.24■■□□□ 1.31
UBL3-201ENST00000380680 MORC1Q86VD1 984 aa23.24■■□□□ 1.31
UBL3-201ENST00000380680 ANKRD50Q9ULJ7 1429 aa23.23■■□□□ 1.31
UBL3-201ENST00000380680 NLRP13Q86W25 1043 aa23.23■■□□□ 1.31
UBL3-201ENST00000380680 FRAT1Q92837 279 aaPredicted RBP23.23■■□□□ 1.31
UBL3-201ENST00000380680 PLEKHG5O94827 1062 aa23.22■■□□□ 1.31
UBL3-201ENST00000380680 HFM1A2PYH4 1435 aa23.22■■□□□ 1.31
UBL3-201ENST00000380680 MAPK8IP3Q9UPT6 1336 aa23.21■■□□□ 1.31
UBL3-201ENST00000380680 RBM19Q9Y4C8 960 aaKnown RBP23.2■■□□□ 1.3
UBL3-201ENST00000380680 PRG4Q92954 1404 aaPredicted RBP23.19■■□□□ 1.3
UBL3-201ENST00000380680 LAMC3Q9Y6N6 1575 aa23.19■■□□□ 1.3
UBL3-201ENST00000380680 HSP90AA1P07900 732 aaKnown RBP23.19■■□□□ 1.3
UBL3-201ENST00000380680 C14orf37Q86TY3 774 aa23.19■■□□□ 1.3
UBL3-201ENST00000380680 SNAPC4Q5SXM2 1469 aa23.18■■□□□ 1.3
UBL3-201ENST00000380680 WASHC2AQ641Q2 1341 aa23.18■■□□□ 1.3
UBL3-201ENST00000380680 WASHC2CQ9Y4E1 1318 aa23.18■■□□□ 1.3
UBL3-201ENST00000380680 EHBP1L1Q8N3D4 1523 aa23.18■■□□□ 1.3
UBL3-201ENST00000380680 PCF11O94913 1555 aaKnown RBP23.17■■□□□ 1.3
UBL3-201ENST00000380680 RCAN3Q9UKA8 241 aa23.17■■□□□ 1.3
UBL3-201ENST00000380680 NUTM2DQ5VT03 806 aaPredicted RBP23.17■■□□□ 1.3
UBL3-201ENST00000380680 KIF7Q2M1P5 1343 aa23.17■■□□□ 1.3
UBL3-201ENST00000380680 RGS3P49796 1198 aa23.17■■□□□ 1.3
UBL3-201ENST00000380680 ERICH6BQ5W0A0 696 aa23.16■■□□□ 1.3
UBL3-201ENST00000380680 PANK3Q9H999 370 aa23.16■■□□□ 1.3
UBL3-201ENST00000380680 LAS1LQ9Y4W2 734 aaKnown RBP23.16■■□□□ 1.3
UBL3-201ENST00000380680 MIA2Q96PC5 1412 aa23.15■■□□□ 1.3
UBL3-201ENST00000380680 CCDC7Q96M83 1385 aa23.15■■□□□ 1.3
UBL3-201ENST00000380680 TSHZ2Q9NRE2 1034 aa23.15■■□□□ 1.3
UBL3-201ENST00000380680 URB2Q14146 1524 aaKnown RBP23.14■■□□□ 1.3
UBL3-201ENST00000380680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.14■■□□□ 1.3
UBL3-201ENST00000380680 FTSJ3Q8IY81 847 aaKnown RBP23.14■■□□□ 1.29
UBL3-201ENST00000380680 ANP32EQ9BTT0 268 aa23.14■■□□□ 1.29
UBL3-201ENST00000380680 NAIPQ13075 1403 aa23.12■■□□□ 1.29
UBL3-201ENST00000380680 ZBTB7CA1YPR0 619 aa23.12■■□□□ 1.29
UBL3-201ENST00000380680 TROQ12816 1431 aaPredicted RBP23.11■■□□□ 1.29
UBL3-201ENST00000380680 CDK13Q14004 1512 aaKnown RBP23.11■■□□□ 1.29
UBL3-201ENST00000380680 EPRSP07814 1512 aaKnown RBP23.11■■□□□ 1.29
UBL3-201ENST00000380680 TRAK1Q9UPV9 953 aa23.1■■□□□ 1.29
UBL3-201ENST00000380680 MYBBP1AQ9BQG0 1328 aaKnown RBP23.1■■□□□ 1.29
UBL3-201ENST00000380680 NBPF8Q3BBV2 869 aa23.1■■□□□ 1.29
UBL3-201ENST00000380680 KIAA0586Q9BVV6 1533 aa23.09■■□□□ 1.29
UBL3-201ENST00000380680 EIF3AQ14152 1382 aaKnown RBP23.09■■□□□ 1.29
UBL3-201ENST00000380680 MYH16Q9H6N6 1097 aa23.08■■□□□ 1.29
UBL3-201ENST00000380680 AFAP1Q8N556 730 aa23.08■■□□□ 1.28
UBL3-201ENST00000380680 MAP3K1Q13233 1512 aa23.08■■□□□ 1.28
UBL3-201ENST00000380680 WDR97A6NE52 1622 aa23.06■■□□□ 1.28
UBL3-201ENST00000380680 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
UBL3-201ENST00000380680 OSCARQ8IYS5 282 aa23.06■■□□□ 1.28
UBL3-201ENST00000380680 CUL7Q14999 1698 aa23.06■■□□□ 1.28
UBL3-201ENST00000380680 HECW1Q76N89 1606 aa23.05■■□□□ 1.28
UBL3-201ENST00000380680 ZBED9Q6R2W3 1325 aa23.04■■□□□ 1.28
UBL3-201ENST00000380680 U2AF1L5P0DN76 240 aaPredicted RBP23.04■■□□□ 1.28
UBL3-201ENST00000380680 U2AF1Q01081 240 aaKnown RBP eCLIP23.04■■□□□ 1.28
UBL3-201ENST00000380680 IQGAP2Q13576 1575 aa23.04■■□□□ 1.28
UBL3-201ENST00000380680 SUPT6HQ7KZ85 1726 aaKnown RBP23.03■■□□□ 1.28
UBL3-201ENST00000380680 DDRGK1Q96HY6 314 aa23.03■■□□□ 1.28
UBL3-201ENST00000380680 CCDC146Q8IYE0 955 aa23.02■■□□□ 1.28
UBL3-201ENST00000380680 DAPK1P53355 1430 aa23.01■■□□□ 1.27
UBL3-201ENST00000380680 CNTLNQ9NXG0 1405 aa23.01■■□□□ 1.27
UBL3-201ENST00000380680 CYB5RLQ6IPT4 315 aa23.01■■□□□ 1.27
UBL3-201ENST00000380680 SOX12O15370 315 aa23.01■■□□□ 1.27
UBL3-201ENST00000380680 HDGFP51858 240 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms