RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 NEUROD2Q15784 382 aa13.15□□□□□ -0.3
CCDC85C-201ENST00000380243 PDE3BQ13370 1112 aa13.15□□□□□ -0.3
CCDC85C-201ENST00000380243 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
CCDC85C-201ENST00000380243 TEX35Q5T0J7 233 aa13.14□□□□□ -0.31
CCDC85C-201ENST00000380243 MFAP1P55081 439 aaKnown RBP13.14□□□□□ -0.31
CCDC85C-201ENST00000380243 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
CCDC85C-201ENST00000380243 UBE2Q2Q8WVN8 375 aa13.13□□□□□ -0.31
CCDC85C-201ENST00000380243 APPP05067 770 aa13.13□□□□□ -0.31
CCDC85C-201ENST00000380243 HSPA5P11021 654 aaKnown RBP13.13□□□□□ -0.31
CCDC85C-201ENST00000380243 IPO8O15397 1037 aaKnown RBP13.13□□□□□ -0.31
CCDC85C-201ENST00000380243 FBLN2P98095 1184 aa13.12□□□□□ -0.31
CCDC85C-201ENST00000380243 NAP1L2Q9ULW6 460 aaPredicted RBP13.12□□□□□ -0.31
CCDC85C-201ENST00000380243 PABPN1Q86U42 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC85C-201ENST00000380243 TSPY4P0CV99 314 aa13.12□□□□□ -0.31
CCDC85C-201ENST00000380243 TSPY10P0CW01 314 aa13.12□□□□□ -0.31
CCDC85C-201ENST00000380243 HTATSF1O43719 755 aaKnown RBP13.12□□□□□ -0.31
CCDC85C-201ENST00000380243 GPS2Q13227 327 aa13.11□□□□□ -0.31
CCDC85C-201ENST00000380243 KCNH8Q96L42 1107 aa13.11□□□□□ -0.31
CCDC85C-201ENST00000380243 RGL3Q3MIN7 710 aa13.11□□□□□ -0.31
CCDC85C-201ENST00000380243 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
CCDC85C-201ENST00000380243 NOC3LQ8WTT2 800 aaKnown RBP13.1□□□□□ -0.31
CCDC85C-201ENST00000380243 CALRP27797 417 aaKnown RBP13.1□□□□□ -0.31
CCDC85C-201ENST00000380243 NFKBIBQ15653 356 aa13.1□□□□□ -0.31
CCDC85C-201ENST00000380243 GOLGA3Q08378 1498 aa13.09□□□□□ -0.31
CCDC85C-201ENST00000380243 TPM4P67936 248 aa13.09□□□□□ -0.31
CCDC85C-201ENST00000380243 MRE11P49959 708 aa13.08□□□□□ -0.32
CCDC85C-201ENST00000380243 CCNB3Q8WWL7 1395 aa13.08□□□□□ -0.32
CCDC85C-201ENST00000380243 MAPK8IP3Q9UPT6 1336 aa13.08□□□□□ -0.32
CCDC85C-201ENST00000380243 NOM1Q5C9Z4 860 aaKnown RBP13.08□□□□□ -0.32
CCDC85C-201ENST00000380243 CENPQQ7L2Z9 268 aaPredicted RBP13.08□□□□□ -0.32
CCDC85C-201ENST00000380243 PMFBP1Q8TBY8 1022 aa13.08□□□□□ -0.32
CCDC85C-201ENST00000380243 OS9Q13438 667 aaPredicted RBP13.07□□□□□ -0.32
CCDC85C-201ENST00000380243 RSF1Q96T23 1441 aaPredicted RBP13.06□□□□□ -0.32
CCDC85C-201ENST00000380243 KTN1Q86UP2 1357 aaKnown RBP13.06□□□□□ -0.32
CCDC85C-201ENST00000380243 ZBED9Q6R2W3 1325 aa13.06□□□□□ -0.32
CCDC85C-201ENST00000380243 TAF3Q5VWG9 929 aa13.05□□□□□ -0.32
CCDC85C-201ENST00000380243 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
CCDC85C-201ENST00000380243 FOXD4L1Q9NU39 408 aa13.05□□□□□ -0.32
CCDC85C-201ENST00000380243 ST18O60284 1047 aa13.04□□□□□ -0.32
CCDC85C-201ENST00000380243 CCDC66A2RUB6 948 aa13.04□□□□□ -0.32
CCDC85C-201ENST00000380243 TAOK2Q9UL54 1235 aa13.03□□□□□ -0.32
CCDC85C-201ENST00000380243 ITPRIPQ8IWB1 547 aa13.03□□□□□ -0.32
CCDC85C-201ENST00000380243 KIF16BQ96L93 1317 aa13.03□□□□□ -0.32
CCDC85C-201ENST00000380243 NASPP49321 788 aaPredicted RBP13.03□□□□□ -0.32
CCDC85C-201ENST00000380243 CCDC39Q9UFE4 941 aa13.02□□□□□ -0.33
CCDC85C-201ENST00000380243 SETD5Q9C0A6 1442 aa13.01□□□□□ -0.33
CCDC85C-201ENST00000380243 CCAR2Q8N163 923 aaKnown RBP13.01□□□□□ -0.33
CCDC85C-201ENST00000380243 HMGN5P82970 282 aaKnown RBP13.01□□□□□ -0.33
CCDC85C-201ENST00000380243 CWC15Q9P013 229 aaKnown RBP13.01□□□□□ -0.33
CCDC85C-201ENST00000380243 CHMP5Q9NZZ3 219 aa13□□□□□ -0.33
CCDC85C-201ENST00000380243 R3HCC1Q9Y3T6 440 aaKnown RBP13□□□□□ -0.33
CCDC85C-201ENST00000380243 FOXD4L5Q5VV16 416 aaPredicted RBP13□□□□□ -0.33
CCDC85C-201ENST00000380243 FOXD4L4Q8WXT5 416 aaPredicted RBP13□□□□□ -0.33
CCDC85C-201ENST00000380243 PPP1R15AO75807 674 aaPredicted RBP12.99□□□□□ -0.33
CCDC85C-201ENST00000380243 RRP1P56182 461 aaKnown RBP12.99□□□□□ -0.33
CCDC85C-201ENST00000380243 TMF1P82094 1093 aa12.99□□□□□ -0.33
CCDC85C-201ENST00000380243 ZNF592Q92610 1267 aa12.98□□□□□ -0.33
CCDC85C-201ENST00000380243 ZCCHC6Q5VYS8 1495 aaKnown RBP12.98□□□□□ -0.33
CCDC85C-201ENST00000380243 EXOC6Q8TAG9 804 aa12.97□□□□□ -0.33
CCDC85C-201ENST00000380243 DIAPH3Q9NSV4 1193 aa12.97□□□□□ -0.33
CCDC85C-201ENST00000380243 GNL2Q13823 731 aaKnown RBP12.97□□□□□ -0.33
CCDC85C-201ENST00000380243 NLRP13Q86W25 1043 aa12.95□□□□□ -0.34
CCDC85C-201ENST00000380243 PAK3O75914 559 aaPredicted RBP12.95□□□□□ -0.34
CCDC85C-201ENST00000380243 TPM3P06753 285 aa12.95□□□□□ -0.34
CCDC85C-201ENST00000380243 U2SURPO15042 1029 aaKnown RBP12.94□□□□□ -0.34
CCDC85C-201ENST00000380243 ATP6V1DQ9Y5K8 247 aa12.94□□□□□ -0.34
CCDC85C-201ENST00000380243 CENPJQ9HC77 1338 aaPredicted RBP12.94□□□□□ -0.34
CCDC85C-201ENST00000380243 RBM10P98175 930 aaKnown RBP12.94□□□□□ -0.34
CCDC85C-201ENST00000380243 ARGLU1Q9NWB6 273 aaPredicted RBP12.94□□□□□ -0.34
CCDC85C-201ENST00000380243 ISY1Q9ULR0 285 aaKnown RBP12.93□□□□□ -0.34
CCDC85C-201ENST00000380243 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
CCDC85C-201ENST00000380243 ZMYND15Q9H091 742 aa12.93□□□□□ -0.34
CCDC85C-201ENST00000380243 FRAT2O75474 233 aaPredicted RBP12.93□□□□□ -0.34
CCDC85C-201ENST00000380243 CCDC34Q96HJ3 373 aa12.93□□□□□ -0.34
CCDC85C-201ENST00000380243 APBB1O00213 710 aa12.93□□□□□ -0.34
CCDC85C-201ENST00000380243 MORC1Q86VD1 984 aa12.93□□□□□ -0.34
CCDC85C-201ENST00000380243 ESF1Q9H501 851 aaKnown RBP12.93□□□□□ -0.34
CCDC85C-201ENST00000380243 CCDC173Q0VFZ6 552 aa12.92□□□□□ -0.34
CCDC85C-201ENST00000380243 CRBNQ96SW2 442 aa12.91□□□□□ -0.34
CCDC85C-201ENST00000380243 HAP1P54257 671 aaPredicted RBP12.91□□□□□ -0.34
CCDC85C-201ENST00000380243 PLIN1O60240 522 aa12.9□□□□□ -0.34
CCDC85C-201ENST00000380243 PHLDB1Q86UU1 1377 aa12.89□□□□□ -0.35
CCDC85C-201ENST00000380243 GOLGA6L19H0YKK7 550 aa12.89□□□□□ -0.35
CCDC85C-201ENST00000380243 IFT57Q9NWB7 429 aa12.89□□□□□ -0.35
CCDC85C-201ENST00000380243 CCDC70Q6NSX1 233 aa12.89□□□□□ -0.35
CCDC85C-201ENST00000380243 TSR1Q2NL82 804 aaKnown RBP12.89□□□□□ -0.35
CCDC85C-201ENST00000380243 CEP164Q9UPV0 1460 aa12.89□□□□□ -0.35
CCDC85C-201ENST00000380243 TRAK2O60296 914 aa12.89□□□□□ -0.35
CCDC85C-201ENST00000380243 ESPNB1AK53 854 aa12.89□□□□□ -0.35
CCDC85C-201ENST00000380243 NUCB2P80303 420 aa12.88□□□□□ -0.35
CCDC85C-201ENST00000380243 CREBRFQ8IUR6 639 aa12.88□□□□□ -0.35
CCDC85C-201ENST00000380243 BECN2A8MW95 431 aa12.88□□□□□ -0.35
CCDC85C-201ENST00000380243 RAB3GAP2Q9H2M9 1393 aa12.88□□□□□ -0.35
CCDC85C-201ENST00000380243 ROCK2O75116 1388 aaKnown RBP12.88□□□□□ -0.35
CCDC85C-201ENST00000380243 PDE4CQ08493 712 aa12.87□□□□□ -0.35
CCDC85C-201ENST00000380243 HMMRO75330 724 aa12.87□□□□□ -0.35
CCDC85C-201ENST00000380243 DCAF11Q8TEB1 546 aa12.87□□□□□ -0.35
CCDC85C-201ENST00000380243 GPATCH3Q96I76 525 aa12.87□□□□□ -0.35
CCDC85C-201ENST00000380243 ACBD3Q9H3P7 528 aa12.86□□□□□ -0.35
CCDC85C-201ENST00000380243 SENP3Q9H4L4 574 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms