RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 EIF4G2P78344 907 aaKnown RBP eCLIP25.43■■□□□ 1.66
TDP2-202ENST00000378198 MAGI1Q96QZ7 1491 aaPredicted RBP25.43■■□□□ 1.66
TDP2-202ENST00000378198 FKBP8Q14318 412 aa25.41■■□□□ 1.66
TDP2-202ENST00000378198 RPRD2Q5VT52 1461 aaKnown RBP25.41■■□□□ 1.66
TDP2-202ENST00000378198 ADGBQ8N7X0 1667 aa25.41■■□□□ 1.66
TDP2-202ENST00000378198 ANKRD30BQ9BXX2 1392 aa25.41■■□□□ 1.66
TDP2-202ENST00000378198 WASHC2AQ641Q2 1341 aa25.4■■□□□ 1.66
TDP2-202ENST00000378198 ADCY10Q96PN6 1610 aa25.4■■□□□ 1.66
TDP2-202ENST00000378198 L3MBTL2Q969R5 705 aa25.4■■□□□ 1.66
TDP2-202ENST00000378198 TROQ12816 1431 aaPredicted RBP25.39■■□□□ 1.66
TDP2-202ENST00000378198 NEFLP07196 543 aa25.38■■□□□ 1.65
TDP2-202ENST00000378198 CEP170Q5SW79 1584 aa25.37■■□□□ 1.65
TDP2-202ENST00000378198 ZNF644Q9H582 1327 aaPredicted RBP25.36■■□□□ 1.65
TDP2-202ENST00000378198 TSHZ2Q9NRE2 1034 aa25.36■■□□□ 1.65
TDP2-202ENST00000378198 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
TDP2-202ENST00000378198 POLR1AO95602 1720 aaPredicted RBP25.35■■□□□ 1.65
TDP2-202ENST00000378198 CAMSAP2Q08AD1 1489 aa25.34■■□□□ 1.65
TDP2-202ENST00000378198 TEX14Q8IWB6 1497 aa25.34■■□□□ 1.65
TDP2-202ENST00000378198 FOXD1Q16676 465 aa25.34■■□□□ 1.65
TDP2-202ENST00000378198 CROCC2H7BZ55 1655 aa25.34■■□□□ 1.65
TDP2-202ENST00000378198 PRG4Q92954 1404 aaPredicted RBP25.33■■□□□ 1.65
TDP2-202ENST00000378198 CNTLNQ9NXG0 1405 aa25.33■■□□□ 1.65
TDP2-202ENST00000378198 ERCC6Q03468 1493 aa25.31■■□□□ 1.64
TDP2-202ENST00000378198 NCOA1Q15788 1441 aa25.31■■□□□ 1.64
TDP2-202ENST00000378198 CHMP7Q8WUX9 453 aaPredicted RBP25.3■■□□□ 1.64
TDP2-202ENST00000378198 BCANQ96GW7 911 aa25.3■■□□□ 1.64
TDP2-202ENST00000378198 SLC4A1APQ9BWU0 796 aaKnown RBP25.3■■□□□ 1.64
TDP2-202ENST00000378198 GPATCH8Q9UKJ3 1502 aaKnown RBP25.29■■□□□ 1.64
TDP2-202ENST00000378198 CARMIL2Q6F5E8 1435 aa25.29■■□□□ 1.64
TDP2-202ENST00000378198 PLB1Q6P1J6 1458 aa25.29■■□□□ 1.64
TDP2-202ENST00000378198 KIF14Q15058 1648 aa25.29■■□□□ 1.64
TDP2-202ENST00000378198 CFDP1Q9UEE9 299 aaPredicted RBP25.28■■□□□ 1.64
TDP2-202ENST00000378198 ADGRL2O95490 1459 aa25.28■■□□□ 1.64
TDP2-202ENST00000378198 PZPP20742 1482 aa25.26■■□□□ 1.63
TDP2-202ENST00000378198 CCDC7Q96M83 1385 aa25.26■■□□□ 1.63
TDP2-202ENST00000378198 NUP160Q12769 1436 aa25.25■■□□□ 1.63
TDP2-202ENST00000378198 NBPF8Q3BBV2 869 aa25.24■■□□□ 1.63
TDP2-202ENST00000378198 HNRNPUQ00839 825 aaKnown RBP eCLIP25.21■■□□□ 1.63
TDP2-202ENST00000378198 SPATA31E1Q6ZUB1 1445 aa25.2■■□□□ 1.62
TDP2-202ENST00000378198 CDC42BPAQ5VT25 1732 aa25.2■■□□□ 1.62
TDP2-202ENST00000378198 JPH4Q96JJ6 628 aa25.19■■□□□ 1.62
TDP2-202ENST00000378198 C11orf95C9JLR9 678 aaPredicted RBP25.19■■□□□ 1.62
TDP2-202ENST00000378198 ANKRD30AQ9BXX3 1397 aa25.18■■□□□ 1.62
TDP2-202ENST00000378198 ABCA8O94911 1581 aa25.17■■□□□ 1.62
TDP2-202ENST00000378198 KIAA1107Q9UPP5 1409 aa25.17■■□□□ 1.62
TDP2-202ENST00000378198 FBLN2P98095 1184 aa25.15■■□□□ 1.62
TDP2-202ENST00000378198 MBD5Q9P267 1494 aa25.14■■□□□ 1.62
TDP2-202ENST00000378198 PRKRIP1Q9H875 184 aaPredicted RBP25.14■■□□□ 1.62
TDP2-202ENST00000378198 ZNF777Q9ULD5 760 aaPredicted RBP25.14■■□□□ 1.62
TDP2-202ENST00000378198 SHANK2Q9UPX8 1470 aa25.12■■□□□ 1.61
TDP2-202ENST00000378198 ABCC10Q5T3U5 1492 aa25.11■■□□□ 1.61
TDP2-202ENST00000378198 PLEKHD1A6NEE1 506 aa25.11■■□□□ 1.61
TDP2-202ENST00000378198 KIF7Q2M1P5 1343 aa25.11■■□□□ 1.61
TDP2-202ENST00000378198 ANKRD50Q9ULJ7 1429 aa25.1■■□□□ 1.61
TDP2-202ENST00000378198 ATP10BO94823 1461 aa25.08■■□□□ 1.6
TDP2-202ENST00000378198 CCDC184Q52MB2 194 aa25.06■■□□□ 1.6
TDP2-202ENST00000378198 PKD2Q13563 968 aa25.05■■□□□ 1.6
TDP2-202ENST00000378198 KDM5DQ9BY66 1539 aa25.04■■□□□ 1.6
TDP2-202ENST00000378198 C9orf84Q5VXU9 1444 aa25.03■■□□□ 1.6
TDP2-202ENST00000378198 MRS2Q9HD23 443 aa25.02■■□□□ 1.6
TDP2-202ENST00000378198 KDM5CP41229 1560 aa25.02■■□□□ 1.6
TDP2-202ENST00000378198 ARHGEF5Q12774 1597 aa25.02■■□□□ 1.6
TDP2-202ENST00000378198 BCORL1Q5H9F3 1711 aa25.01■■□□□ 1.59
TDP2-202ENST00000378198 ERICH6BQ5W0A0 696 aa25■■□□□ 1.59
TDP2-202ENST00000378198 UHRF1BP1Q6BDS2 1440 aa24.99■■□□□ 1.59
TDP2-202ENST00000378198 ARID4BQ4LE39 1312 aaPredicted RBP24.99■■□□□ 1.59
TDP2-202ENST00000378198 USP47Q96K76 1375 aa24.98■■□□□ 1.59
TDP2-202ENST00000378198 ARHGEF12Q9NZN5 1544 aa24.97■■□□□ 1.59
TDP2-202ENST00000378198 FAM9BQ8IZU0 186 aa24.97■■□□□ 1.59
TDP2-202ENST00000378198 NUP155O75694 1391 aa24.97■■□□□ 1.59
TDP2-202ENST00000378198 TSPY4P0CV99 314 aa24.97■■□□□ 1.59
TDP2-202ENST00000378198 TSPY10P0CW01 314 aa24.97■■□□□ 1.59
TDP2-202ENST00000378198 ZBED9Q6R2W3 1325 aa24.96■■□□□ 1.59
TDP2-202ENST00000378198 RALGAPBQ86X10 1494 aa24.95■■□□□ 1.58
TDP2-202ENST00000378198 CDC42BPBQ9Y5S2 1711 aa24.93■■□□□ 1.58
TDP2-202ENST00000378198 DHX29Q7Z478 1369 aaKnown RBP24.92■■□□□ 1.58
TDP2-202ENST00000378198 PREX2Q70Z35 1606 aa24.92■■□□□ 1.58
TDP2-202ENST00000378198 PTPRGP23470 1445 aa24.92■■□□□ 1.58
TDP2-202ENST00000378198 ZNF326Q5BKZ1 582 aaKnown RBP24.9■■□□□ 1.58
TDP2-202ENST00000378198 RBM19Q9Y4C8 960 aaKnown RBP24.9■■□□□ 1.58
TDP2-202ENST00000378198 KIF15Q9NS87 1388 aa24.89■■□□□ 1.58
TDP2-202ENST00000378198 SAMD9LQ8IVG5 1584 aa24.89■■□□□ 1.57
TDP2-202ENST00000378198 ROCK2O75116 1388 aaKnown RBP24.88■■□□□ 1.57
TDP2-202ENST00000378198 CCDC141Q6ZP82 1450 aa24.87■■□□□ 1.57
TDP2-202ENST00000378198 HNRNPMP52272 730 aaKnown RBP eCLIP24.85■■□□□ 1.57
TDP2-202ENST00000378198 IRX6P78412 446 aaPredicted RBP24.85■■□□□ 1.57
TDP2-202ENST00000378198 RSPH4AQ5TD94 716 aa24.85■■□□□ 1.57
TDP2-202ENST00000378198 ANP32EQ9BTT0 268 aa24.84■■□□□ 1.57
TDP2-202ENST00000378198 PPP4R2Q9NY27 417 aa24.83■■□□□ 1.57
TDP2-202ENST00000378198 CARD11Q9BXL7 1154 aa24.81■■□□□ 1.56
TDP2-202ENST00000378198 CHD1O14646 1710 aa24.81■■□□□ 1.56
TDP2-202ENST00000378198 MAST1Q9Y2H9 1570 aa24.81■■□□□ 1.56
TDP2-202ENST00000378198 FAM135AQ9P2D6 1515 aa24.8■■□□□ 1.56
TDP2-202ENST00000378198 POLR3GLQ9BT43 218 aa24.79■■□□□ 1.56
TDP2-202ENST00000378198 SHROOM2Q13796 1616 aa24.77■■□□□ 1.56
TDP2-202ENST00000378198 UNC13BO14795 1591 aa24.76■■□□□ 1.55
TDP2-202ENST00000378198 E9PCH4 1651 aa24.75■■□□□ 1.55
TDP2-202ENST00000378198 SMG6Q86US8 1419 aaKnown RBP24.74■■□□□ 1.55
TDP2-202ENST00000378198 DCAF11Q8TEB1 546 aa24.74■■□□□ 1.55
TDP2-202ENST00000378198 KDM2AQ9Y2K7 1162 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms