RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 ADAMTS12P58397 1594 aa28.31■■■□□ 2.12
CLN5-201ENST00000377453 FAM9BQ8IZU0 186 aa28.27■■■□□ 2.12
CLN5-201ENST00000377453 ANP32EQ9BTT0 268 aa28.27■■■□□ 2.12
CLN5-201ENST00000377453 MIA2Q96PC5 1412 aa28.26■■■□□ 2.11
CLN5-201ENST00000377453 DAPK1P53355 1430 aa28.25■■■□□ 2.11
CLN5-201ENST00000377453 SLC4A1APQ9BWU0 796 aaKnown RBP28.24■■■□□ 2.11
CLN5-201ENST00000377453 ABCC5O15440 1437 aa28.24■■■□□ 2.11
CLN5-201ENST00000377453 AKNAQ7Z591 1439 aa28.22■■■□□ 2.11
CLN5-201ENST00000377453 CNTLNQ9NXG0 1405 aa28.22■■■□□ 2.11
CLN5-201ENST00000377453 ANKRD30BQ9BXX2 1392 aa28.21■■■□□ 2.11
CLN5-201ENST00000377453 FBLN2P98095 1184 aa28.21■■■□□ 2.11
CLN5-201ENST00000377453 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
CLN5-201ENST00000377453 CCDC7Q96M83 1385 aa28.21■■■□□ 2.11
CLN5-201ENST00000377453 ZNF777Q9ULD5 760 aaPredicted RBP28.19■■■□□ 2.1
CLN5-201ENST00000377453 PRKRIP1Q9H875 184 aaPredicted RBP28.18■■■□□ 2.1
CLN5-201ENST00000377453 ZNF326Q5BKZ1 582 aaKnown RBP28.17■■■□□ 2.1
CLN5-201ENST00000377453 NUP153P49790 1475 aaKnown RBP28.17■■■□□ 2.1
CLN5-201ENST00000377453 SENP3-EIF4A1A0A087X0R7 540 aa28.17■■■□□ 2.1
CLN5-201ENST00000377453 DISP1Q96F81 1524 aa28.16■■■□□ 2.1
CLN5-201ENST00000377453 POLR3GLQ9BT43 218 aa28.16■■■□□ 2.1
CLN5-201ENST00000377453 MRS2Q9HD23 443 aa28.16■■■□□ 2.1
CLN5-201ENST00000377453 NCOA1Q15788 1441 aa28.15■■■□□ 2.1
CLN5-201ENST00000377453 PRG4Q92954 1404 aaPredicted RBP28.14■■■□□ 2.1
CLN5-201ENST00000377453 KIF7Q2M1P5 1343 aa28.14■■■□□ 2.09
CLN5-201ENST00000377453 RPRD2Q5VT52 1461 aaKnown RBP28.13■■■□□ 2.09
CLN5-201ENST00000377453 TEX14Q8IWB6 1497 aa28.12■■■□□ 2.09
CLN5-201ENST00000377453 KIAA0556O60303 1618 aa28.1■■■□□ 2.09
CLN5-201ENST00000377453 EIF4G3O43432 1585 aaKnown RBP28.09■■■□□ 2.09
CLN5-201ENST00000377453 ROCK1Q13464 1354 aa28.08■■■□□ 2.09
CLN5-201ENST00000377453 CFDP1Q9UEE9 299 aaPredicted RBP28.07■■■□□ 2.08
CLN5-201ENST00000377453 DNMT1P26358 1616 aaKnown RBP28.07■■■□□ 2.08
CLN5-201ENST00000377453 KIAA0586Q9BVV6 1533 aa28.05■■■□□ 2.08
CLN5-201ENST00000377453 CHMP7Q8WUX9 453 aaPredicted RBP28.05■■■□□ 2.08
CLN5-201ENST00000377453 PLB1Q6P1J6 1458 aa28.03■■■□□ 2.08
CLN5-201ENST00000377453 MSH5O43196 834 aa28.02■■■□□ 2.08
CLN5-201ENST00000377453 PZPP20742 1482 aa28.02■■■□□ 2.08
CLN5-201ENST00000377453 RAPGEF6Q8TEU7 1601 aa28.01■■■□□ 2.08
CLN5-201ENST00000377453 CDK11AQ9UQ88 783 aaPredicted RBP28.01■■■□□ 2.07
CLN5-201ENST00000377453 SPATA31E1Q6ZUB1 1445 aa28.01■■■□□ 2.07
CLN5-201ENST00000377453 CAMSAP2Q08AD1 1489 aa27.99■■■□□ 2.07
CLN5-201ENST00000377453 GRIN2AQ12879 1464 aa27.98■■■□□ 2.07
CLN5-201ENST00000377453 PKD2Q13563 968 aa27.98■■■□□ 2.07
CLN5-201ENST00000377453 B4GALNT3Q6L9W6 998 aa27.97■■■□□ 2.07
CLN5-201ENST00000377453 KIF14Q15058 1648 aa27.94■■■□□ 2.06
CLN5-201ENST00000377453 TROQ12816 1431 aaPredicted RBP27.94■■■□□ 2.06
CLN5-201ENST00000377453 GPATCH8Q9UKJ3 1502 aaKnown RBP27.92■■■□□ 2.06
CLN5-201ENST00000377453 ZBED9Q6R2W3 1325 aa27.89■■■□□ 2.06
CLN5-201ENST00000377453 USP47Q96K76 1375 aa27.89■■■□□ 2.05
CLN5-201ENST00000377453 PPP4R2Q9NY27 417 aa27.87■■■□□ 2.05
CLN5-201ENST00000377453 KDM2AQ9Y2K7 1162 aa27.86■■■□□ 2.05
CLN5-201ENST00000377453 DHX29Q7Z478 1369 aaKnown RBP27.85■■■□□ 2.05
CLN5-201ENST00000377453 KIAA1107Q9UPP5 1409 aa27.85■■■□□ 2.05
CLN5-201ENST00000377453 BCORL1Q5H9F3 1711 aa27.84■■■□□ 2.05
CLN5-201ENST00000377453 CEP170Q5SW79 1584 aa27.83■■■□□ 2.05
CLN5-201ENST00000377453 JPH4Q96JJ6 628 aa27.81■■■□□ 2.04
CLN5-201ENST00000377453 MBD5Q9P267 1494 aa27.8■■■□□ 2.04
CLN5-201ENST00000377453 SYNJ2O15056 1496 aa27.79■■■□□ 2.04
CLN5-201ENST00000377453 ANKRD50Q9ULJ7 1429 aa27.79■■■□□ 2.04
CLN5-201ENST00000377453 MAGI1Q96QZ7 1491 aaPredicted RBP27.79■■■□□ 2.04
CLN5-201ENST00000377453 NUP155O75694 1391 aa27.78■■■□□ 2.04
CLN5-201ENST00000377453 ANKRD30AQ9BXX3 1397 aa27.78■■■□□ 2.04
CLN5-201ENST00000377453 HNRNPMP52272 730 aaKnown RBP eCLIP27.75■■■□□ 2.03
CLN5-201ENST00000377453 CARD11Q9BXL7 1154 aa27.74■■■□□ 2.03
CLN5-201ENST00000377453 PLEKHD1A6NEE1 506 aa27.72■■■□□ 2.03
CLN5-201ENST00000377453 ADGBQ8N7X0 1667 aa27.72■■■□□ 2.03
CLN5-201ENST00000377453 ITSN2Q9NZM3 1697 aa27.71■■■□□ 2.03
CLN5-201ENST00000377453 ADGRL2O95490 1459 aa27.71■■■□□ 2.03
CLN5-201ENST00000377453 ST20-MTHFSA0A0A6YYL1 179 aa27.7■■■□□ 2.02
CLN5-201ENST00000377453 POLR1AO95602 1720 aaPredicted RBP27.69■■■□□ 2.02
CLN5-201ENST00000377453 DCAF11Q8TEB1 546 aa27.69■■■□□ 2.02
CLN5-201ENST00000377453 C9orf84Q5VXU9 1444 aa27.68■■■□□ 2.02
CLN5-201ENST00000377453 ERICH6BQ5W0A0 696 aa27.68■■■□□ 2.02
CLN5-201ENST00000377453 FANCIQ9NVI1 1328 aa27.67■■■□□ 2.02
CLN5-201ENST00000377453 CROCC2H7BZ55 1655 aa27.67■■■□□ 2.02
CLN5-201ENST00000377453 KDM5CP41229 1560 aa27.67■■■□□ 2.02
CLN5-201ENST00000377453 CARMIL2Q6F5E8 1435 aa27.66■■■□□ 2.02
CLN5-201ENST00000377453 ATP10BO94823 1461 aa27.64■■■□□ 2.02
CLN5-201ENST00000377453 TMC1Q8TDI8 760 aa27.63■■■□□ 2.01
CLN5-201ENST00000377453 TSPY4P0CV99 314 aa27.63■■■□□ 2.01
CLN5-201ENST00000377453 TSPY10P0CW01 314 aa27.63■■■□□ 2.01
CLN5-201ENST00000377453 SALL2Q9Y467 1007 aaPredicted RBP27.63■■■□□ 2.01
CLN5-201ENST00000377453 NUDCQ9Y266 331 aa27.62■■■□□ 2.01
CLN5-201ENST00000377453 ADCY10Q96PN6 1610 aa27.62■■■□□ 2.01
CLN5-201ENST00000377453 PNISRQ8TF01 805 aaKnown RBP27.62■■■□□ 2.01
CLN5-201ENST00000377453 SMG6Q86US8 1419 aaKnown RBP27.6■■■□□ 2.01
CLN5-201ENST00000377453 CDC42BPAQ5VT25 1732 aa27.6■■■□□ 2.01
CLN5-201ENST00000377453 NUP160Q12769 1436 aa27.6■■■□□ 2.01
CLN5-201ENST00000377453 KIF15Q9NS87 1388 aa27.6■■■□□ 2.01
CLN5-201ENST00000377453 ABCC10Q5T3U5 1492 aa27.6■■■□□ 2.01
CLN5-201ENST00000377453 ERICH6Q7L0X2 663 aa27.59■■■□□ 2.01
CLN5-201ENST00000377453 RGL3Q3MIN7 710 aa27.59■■■□□ 2.01
CLN5-201ENST00000377453 RALGAPBQ86X10 1494 aa27.57■■■□□ 2
CLN5-201ENST00000377453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.54■■■□□ 2
CLN5-201ENST00000377453 UHRF1BP1Q6BDS2 1440 aa27.54■■■□□ 2
CLN5-201ENST00000377453 ABCA8O94911 1581 aa27.52■■■□□ 2
CLN5-201ENST00000377453 NBPF1Q3BBV0 1214 aa27.52■■■□□ 2
CLN5-201ENST00000377453 ROCK2O75116 1388 aaKnown RBP27.51■■□□□ 1.99
CLN5-201ENST00000377453 CCDC136Q96JN2 1154 aa27.51■■□□□ 1.99
CLN5-201ENST00000377453 ARID4BQ4LE39 1312 aaPredicted RBP27.46■■□□□ 1.99
CLN5-201ENST00000377453 SHANK2Q9UPX8 1470 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms