RNA–Protein interactions for RNA: ENST00000377012.8

GABBR1-203, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GABBR1, Length 4,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-203ENST00000377012 ST20-MTHFSA0A0A6YYL1 179 aa16.29■□□□□ 0.2
GABBR1-203ENST00000377012 PCF11O94913 1555 aaKnown RBP16.29■□□□□ 0.2
GABBR1-203ENST00000377012 BIVM-ERCC5R4GMW8 1640 aa16.29■□□□□ 0.2
GABBR1-203ENST00000377012 NBPF8Q3BBV2 869 aa16.29■□□□□ 0.2
GABBR1-203ENST00000377012 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
GABBR1-203ENST00000377012 ANKRD30AQ9BXX3 1397 aa16.25■□□□□ 0.19
GABBR1-203ENST00000377012 KNSTRNQ9Y448 316 aa16.24■□□□□ 0.19
GABBR1-203ENST00000377012 NPM1P06748 294 aaKnown RBP eCLIP16.24■□□□□ 0.19
GABBR1-203ENST00000377012 C11orf95C9JLR9 678 aaPredicted RBP16.23■□□□□ 0.19
GABBR1-203ENST00000377012 NAIPQ13075 1403 aa16.23■□□□□ 0.19
GABBR1-203ENST00000377012 CCDC7Q96M83 1385 aa16.23■□□□□ 0.19
GABBR1-203ENST00000377012 HFM1A2PYH4 1435 aa16.23■□□□□ 0.19
GABBR1-203ENST00000377012 TNNT2P45379 298 aaPredicted RBP16.23■□□□□ 0.19
GABBR1-203ENST00000377012 NEUROD2Q15784 382 aa16.23■□□□□ 0.19
GABBR1-203ENST00000377012 MAPKBP1O60336 1514 aa16.22■□□□□ 0.19
GABBR1-203ENST00000377012 ROCK2O75116 1388 aaKnown RBP16.22■□□□□ 0.19
GABBR1-203ENST00000377012 USP47Q96K76 1375 aa16.21■□□□□ 0.18
GABBR1-203ENST00000377012 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
GABBR1-203ENST00000377012 LAS1LQ9Y4W2 734 aaKnown RBP16.2■□□□□ 0.18
GABBR1-203ENST00000377012 NUDCQ9Y266 331 aa16.19■□□□□ 0.18
GABBR1-203ENST00000377012 PTPRKQ15262 1439 aa16.18■□□□□ 0.18
GABBR1-203ENST00000377012 NOP58Q9Y2X3 529 aaKnown RBP16.18■□□□□ 0.18
GABBR1-203ENST00000377012 ABCA10Q8WWZ4 1543 aa16.17■□□□□ 0.18
GABBR1-203ENST00000377012 TMF1P82094 1093 aa16.16■□□□□ 0.18
GABBR1-203ENST00000377012 EFCAB5A4FU69 1503 aa16.16■□□□□ 0.18
GABBR1-203ENST00000377012 CDK13Q14004 1512 aaKnown RBP16.16■□□□□ 0.18
GABBR1-203ENST00000377012 RGS3P49796 1198 aa16.16■□□□□ 0.18
GABBR1-203ENST00000377012 DNMBPQ6XZF7 1577 aa16.15■□□□□ 0.18
GABBR1-203ENST00000377012 ZBED9Q6R2W3 1325 aa16.15■□□□□ 0.18
GABBR1-203ENST00000377012 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
GABBR1-203ENST00000377012 SLC24A1O60721 1099 aa16.15■□□□□ 0.18
GABBR1-203ENST00000377012 CNTLNQ9NXG0 1405 aa16.14■□□□□ 0.17
GABBR1-203ENST00000377012 ESF1Q9H501 851 aaKnown RBP16.13■□□□□ 0.17
GABBR1-203ENST00000377012 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.13■□□□□ 0.17
GABBR1-203ENST00000377012 PLIN1O60240 522 aa16.12■□□□□ 0.17
GABBR1-203ENST00000377012 PRG4Q92954 1404 aaPredicted RBP16.12■□□□□ 0.17
GABBR1-203ENST00000377012 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
GABBR1-203ENST00000377012 KTN1Q86UP2 1357 aaKnown RBP16.12■□□□□ 0.17
GABBR1-203ENST00000377012 ERICH6BQ5W0A0 696 aa16.1■□□□□ 0.17
GABBR1-203ENST00000377012 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
GABBR1-203ENST00000377012 MAP3K1Q13233 1512 aa16.09■□□□□ 0.17
GABBR1-203ENST00000377012 RALBP1Q15311 655 aa16.09■□□□□ 0.17
GABBR1-203ENST00000377012 PANK3Q9H999 370 aa16.09■□□□□ 0.17
GABBR1-203ENST00000377012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.08■□□□□ 0.173e-13■■□□□ 11.8
GABBR1-203ENST00000377012 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
GABBR1-203ENST00000377012 NLRP13Q86W25 1043 aa16.08■□□□□ 0.16
GABBR1-203ENST00000377012 EXOC6Q8TAG9 804 aa16.08■□□□□ 0.16
GABBR1-203ENST00000377012 ARXQ96QS3 562 aa16.08■□□□□ 0.16
GABBR1-203ENST00000377012 FRAT1Q92837 279 aaPredicted RBP16.07■□□□□ 0.16
GABBR1-203ENST00000377012 SAFB2Q14151 953 aaKnown RBP eCLIP16.06■□□□□ 0.16
GABBR1-203ENST00000377012 EHBP1L1Q8N3D4 1523 aa16.06■□□□□ 0.16
GABBR1-203ENST00000377012 CCDC146Q8IYE0 955 aa16.06■□□□□ 0.16
GABBR1-203ENST00000377012 ANKRD50Q9ULJ7 1429 aa16.06■□□□□ 0.16
GABBR1-203ENST00000377012 EPRSP07814 1512 aaKnown RBP16.05■□□□□ 0.16
GABBR1-203ENST00000377012 GRIN2BQ13224 1484 aa16.05■□□□□ 0.16
GABBR1-203ENST00000377012 NBPF1Q3BBV0 1214 aa16.04■□□□□ 0.16
GABBR1-203ENST00000377012 DEKP35659 375 aaKnown RBP16.04■□□□□ 0.16
GABBR1-203ENST00000377012 CDCA8Q53HL2 280 aa16.04■□□□□ 0.16
GABBR1-203ENST00000377012 MYBBP1AQ9BQG0 1328 aaKnown RBP16.04■□□□□ 0.16
GABBR1-203ENST00000377012 KIF15Q9NS87 1388 aa16.03■□□□□ 0.16
GABBR1-203ENST00000377012 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
GABBR1-203ENST00000377012 PTPRGP23470 1445 aa16.03■□□□□ 0.16
GABBR1-203ENST00000377012 AKNAQ7Z591 1439 aa16.02■□□□□ 0.16
GABBR1-203ENST00000377012 NEFMP07197 916 aa16.02■□□□□ 0.16
GABBR1-203ENST00000377012 EFCAB2Q5VUJ9 269 aa16.02■□□□□ 0.16
GABBR1-203ENST00000377012 GGT6Q6P531 493 aa16.02■□□□□ 0.16
GABBR1-203ENST00000377012 CCDC144AA2RUR9 1427 aa16.02■□□□□ 0.15
GABBR1-203ENST00000377012 KIF3BO15066 747 aa16.02■□□□□ 0.15
GABBR1-203ENST00000377012 DAPK1P53355 1430 aa16.01■□□□□ 0.15
GABBR1-203ENST00000377012 CDCA7LQ96GN5 454 aa16■□□□□ 0.15
GABBR1-203ENST00000377012 SUPT6HQ7KZ85 1726 aaKnown RBP16■□□□□ 0.15
GABBR1-203ENST00000377012 RTN4Q9NQC3 1192 aaKnown RBP16■□□□□ 0.15
GABBR1-203ENST00000377012 PPM1GO15355 546 aaPredicted RBP16■□□□□ 0.15
GABBR1-203ENST00000377012 NUTM2DQ5VT03 806 aaPredicted RBP16■□□□□ 0.15
GABBR1-203ENST00000377012 MIA2Q96PC5 1412 aa15.99■□□□□ 0.15
GABBR1-203ENST00000377012 PTPN23Q9H3S7 1636 aa15.99■□□□□ 0.15
GABBR1-203ENST00000377012 ANKRD30BQ9BXX2 1392 aa15.98■□□□□ 0.15
GABBR1-203ENST00000377012 FANCIQ9NVI1 1328 aa15.97■□□□□ 0.15
GABBR1-203ENST00000377012 RRP1P56182 461 aaKnown RBP15.97■□□□□ 0.15
GABBR1-203ENST00000377012 ABCC5O15440 1437 aa15.96■□□□□ 0.15
GABBR1-203ENST00000377012 SPAG9O60271 1321 aaKnown RBP15.95■□□□□ 0.14
GABBR1-203ENST00000377012 SNAPC4Q5SXM2 1469 aa15.95■□□□□ 0.14
GABBR1-203ENST00000377012 UPF2Q9HAU5 1272 aaKnown RBP15.95■□□□□ 0.14
GABBR1-203ENST00000377012 PNISRQ8TF01 805 aaKnown RBP15.95■□□□□ 0.14
GABBR1-203ENST00000377012 MSH5O43196 834 aa15.94■□□□□ 0.14
GABBR1-203ENST00000377012 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
GABBR1-203ENST00000377012 PLB1Q6P1J6 1458 aa15.94■□□□□ 0.14
GABBR1-203ENST00000377012 U2SURPO15042 1029 aaKnown RBP15.94■□□□□ 0.14
GABBR1-203ENST00000377012 IPO9Q96P70 1041 aaKnown RBP15.94■□□□□ 0.14
GABBR1-203ENST00000377012 CRBNQ96SW2 442 aa15.94■□□□□ 0.14
GABBR1-203ENST00000377012 STK26Q9P289 416 aa15.93■□□□□ 0.14
GABBR1-203ENST00000377012 CUL7Q14999 1698 aa15.93■□□□□ 0.14
GABBR1-203ENST00000377012 TROQ12816 1431 aaPredicted RBP15.93■□□□□ 0.14
GABBR1-203ENST00000377012 KIAA1107Q9UPP5 1409 aa15.93■□□□□ 0.14
GABBR1-203ENST00000377012 MORC1Q86VD1 984 aa15.93■□□□□ 0.14
GABBR1-203ENST00000377012 RSPH4AQ5TD94 716 aa15.92■□□□□ 0.14
GABBR1-203ENST00000377012 HECW1Q76N89 1606 aa15.92■□□□□ 0.14
GABBR1-203ENST00000377012 SLC4A3P48751 1232 aa15.92■□□□□ 0.14
GABBR1-203ENST00000377012 RRP7AQ9Y3A4 280 aaKnown RBP15.92■□□□□ 0.14
GABBR1-203ENST00000377012 IQGAP2Q13576 1575 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms