RNA–Protein interactions for RNA: ENST00000376300.6

CCDC93-202, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC93, Length 6,899 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-202ENST00000376300 SOX12O15370 315 aa9.74□□□□□ -0.85
CCDC93-202ENST00000376300 TONSLQ96HA7 1378 aa9.74□□□□□ -0.85
CCDC93-202ENST00000376300 DDX10Q13206 875 aaKnown RBP9.74□□□□□ -0.85
CCDC93-202ENST00000376300 EID1Q9Y6B2 187 aa9.73□□□□□ -0.85
CCDC93-202ENST00000376300 KANK1Q14678 1352 aa9.73□□□□□ -0.85
CCDC93-202ENST00000376300 CCDC136Q96JN2 1154 aa9.73□□□□□ -0.85
CCDC93-202ENST00000376300 SYNJ1O43426 1573 aa9.73□□□□□ -0.85
CCDC93-202ENST00000376300 HDGFP51858 240 aaKnown RBP9.73□□□□□ -0.85
CCDC93-202ENST00000376300 SYNJ2O15056 1496 aa9.73□□□□□ -0.85
CCDC93-202ENST00000376300 LAS1LQ9Y4W2 734 aaKnown RBP9.73□□□□□ -0.85
CCDC93-202ENST00000376300 PKD2Q13563 968 aa9.72□□□□□ -0.85
CCDC93-202ENST00000376300 CEBPAP49715 358 aaPredicted RBP9.72□□□□□ -0.85
CCDC93-202ENST00000376300 TPRNQ4KMQ1 711 aa9.71□□□□□ -0.85
CCDC93-202ENST00000376300 NUP155O75694 1391 aa9.7□□□□□ -0.86
CCDC93-202ENST00000376300 DCAF11Q8TEB1 546 aa9.69□□□□□ -0.86
CCDC93-202ENST00000376300 GRIN2AQ12879 1464 aa9.68□□□□□ -0.86
CCDC93-202ENST00000376300 ARID3AQ99856 593 aa9.68□□□□□ -0.86
CCDC93-202ENST00000376300 SIN3AQ96ST3 1273 aa9.68□□□□□ -0.86
CCDC93-202ENST00000376300 RSPH4AQ5TD94 716 aa9.67□□□□□ -0.86
CCDC93-202ENST00000376300 DEKP35659 375 aaKnown RBP9.67□□□□□ -0.86
CCDC93-202ENST00000376300 TRIM44Q96DX7 344 aaPredicted RBP9.67□□□□□ -0.86
CCDC93-202ENST00000376300 VPS8Q8N3P4 1428 aa9.67□□□□□ -0.86
CCDC93-202ENST00000376300 PPM1GO15355 546 aaPredicted RBP9.67□□□□□ -0.86
CCDC93-202ENST00000376300 ABCA10Q8WWZ4 1543 aa9.67□□□□□ -0.86
CCDC93-202ENST00000376300 KIAA0586Q9BVV6 1533 aa9.67□□□□□ -0.86
CCDC93-202ENST00000376300 UPF2Q9HAU5 1272 aaKnown RBP9.67□□□□□ -0.86
CCDC93-202ENST00000376300 SCAPERQ9BY12 1400 aa9.66□□□□□ -0.86
CCDC93-202ENST00000376300 UACAQ9BZF9 1416 aa9.66□□□□□ -0.86
CCDC93-202ENST00000376300 MAGI1Q96QZ7 1491 aaPredicted RBP9.66□□□□□ -0.86
CCDC93-202ENST00000376300 PEG3Q9GZU2 1588 aa9.66□□□□□ -0.86
CCDC93-202ENST00000376300 NEFMP07197 916 aa9.66□□□□□ -0.86
CCDC93-202ENST00000376300 CCDC18Q5T9S5 1454 aa9.66□□□□□ -0.86
CCDC93-202ENST00000376300 PAK3O75914 559 aaPredicted RBP9.65□□□□□ -0.86
CCDC93-202ENST00000376300 CD109Q6YHK3 1445 aa9.65□□□□□ -0.87
CCDC93-202ENST00000376300 PLB1Q6P1J6 1458 aa9.64□□□□□ -0.87
CCDC93-202ENST00000376300 CCDC9Q9Y3X0 531 aaKnown RBP9.64□□□□□ -0.87
CCDC93-202ENST00000376300 TNNT2P45379 298 aaPredicted RBP9.64□□□□□ -0.87
CCDC93-202ENST00000376300 HSPA2P54652 639 aa9.64□□□□□ -0.87
CCDC93-202ENST00000376300 ANKRD30AQ9BXX3 1397 aa9.64□□□□□ -0.87
CCDC93-202ENST00000376300 PRDM2Q13029 1718 aa9.63□□□□□ -0.87
CCDC93-202ENST00000376300 PIP4K2BP78356 416 aa9.63□□□□□ -0.87
CCDC93-202ENST00000376300 ARHGAP35Q9NRY4 1499 aa9.62□□□□□ -0.87
CCDC93-202ENST00000376300 SRPK2P78362 688 aaKnown RBP9.62□□□□□ -0.87
CCDC93-202ENST00000376300 NCLP19338 710 aaKnown RBP9.61□□□□□ -0.87
CCDC93-202ENST00000376300 DNTTIP2Q5QJE6 756 aaKnown RBP9.61□□□□□ -0.87
CCDC93-202ENST00000376300 SLC26A8Q96RN1 970 aa9.6□□□□□ -0.87
CCDC93-202ENST00000376300 CDK11BP21127 795 aaKnown RBP9.6□□□□□ -0.87
CCDC93-202ENST00000376300 TXNDC2Q86VQ3 553 aa9.6□□□□□ -0.87
CCDC93-202ENST00000376300 CARD11Q9BXL7 1154 aa9.6□□□□□ -0.87
CCDC93-202ENST00000376300 TOP2BQ02880 1626 aa9.59□□□□□ -0.87
CCDC93-202ENST00000376300 RBM33Q96EV2 1170 aaKnown RBP9.58□□□□□ -0.88
CCDC93-202ENST00000376300 PHF23Q9BUL5 403 aaPredicted RBP9.58□□□□□ -0.88
CCDC93-202ENST00000376300 KIF21AQ7Z4S6 1674 aa9.58□□□□□ -0.88
CCDC93-202ENST00000376300 MPHOSPH9Q99550 1183 aa9.57□□□□□ -0.88
CCDC93-202ENST00000376300 NOP58Q9Y2X3 529 aaKnown RBP9.57□□□□□ -0.88
CCDC93-202ENST00000376300 SUPT16HQ9Y5B9 1047 aaKnown RBP9.57□□□□□ -0.88
CCDC93-202ENST00000376300 TRAK1Q9UPV9 953 aa9.57□□□□□ -0.88
CCDC93-202ENST00000376300 PTMAP06454 111 aaKnown RBP9.55□□□□□ -0.88
CCDC93-202ENST00000376300 PROSER2Q86WR7 435 aaPredicted RBP9.55□□□□□ -0.88
CCDC93-202ENST00000376300 PRXQ9BXM0 1461 aa9.55□□□□□ -0.88
CCDC93-202ENST00000376300 NGDNQ8NEJ9 315 aaKnown RBP9.55□□□□□ -0.88
CCDC93-202ENST00000376300 ARHGAP5Q13017 1502 aa9.54□□□□□ -0.88
CCDC93-202ENST00000376300 FBXO31Q5XUX0 539 aaPredicted RBP9.54□□□□□ -0.88
CCDC93-202ENST00000376300 THEMISQ8N1K5 641 aaPredicted RBP9.54□□□□□ -0.88
CCDC93-202ENST00000376300 ASXL2Q76L83 1435 aa9.53□□□□□ -0.88
CCDC93-202ENST00000376300 ERICH6BQ5W0A0 696 aa9.53□□□□□ -0.88
CCDC93-202ENST00000376300 DDRGK1Q96HY6 314 aa9.53□□□□□ -0.88
CCDC93-202ENST00000376300 KIF15Q9NS87 1388 aa9.53□□□□□ -0.88
CCDC93-202ENST00000376300 ANKLE2Q86XL3 938 aa9.52□□□□□ -0.89
CCDC93-202ENST00000376300 CSB-PGBD3P0DP91 1061 aa9.51□□□□□ -0.89
CCDC93-202ENST00000376300 MRS2Q9HD23 443 aa9.51□□□□□ -0.89
CCDC93-202ENST00000376300 ARAP1Q96P48 1450 aa9.51□□□□□ -0.89
CCDC93-202ENST00000376300 ATF3P18847 181 aa9.51□□□□□ -0.89
CCDC93-202ENST00000376300 SPRYD3Q8NCJ5 442 aa9.51□□□□□ -0.89
CCDC93-202ENST00000376300 EIF4G2P78344 907 aaKnown RBP eCLIP9.5□□□□□ -0.89
CCDC93-202ENST00000376300 WDR62O43379 1518 aa9.5□□□□□ -0.89
CCDC93-202ENST00000376300 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
CCDC93-202ENST00000376300 MEX3CQ5U5Q3 659 aaKnown RBP9.5□□□□□ -0.89
CCDC93-202ENST00000376300 POGZQ7Z3K3 1410 aa9.5□□□□□ -0.89
CCDC93-202ENST00000376300 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-202ENST00000376300 IQGAP2Q13576 1575 aa9.49□□□□□ -0.89
CCDC93-202ENST00000376300 NUTM2BA6NNL0 878 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-202ENST00000376300 NUTM2EB1AL46 878 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-202ENST00000376300 TMEM132EQ6IEE7 984 aa9.49□□□□□ -0.89
CCDC93-202ENST00000376300 NUTM2AQ8IVF1 878 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-202ENST00000376300 TROQ12816 1431 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-202ENST00000376300 CDK13Q14004 1512 aaKnown RBP9.49□□□□□ -0.89
CCDC93-202ENST00000376300 ERICH3Q5RHP9 1530 aa9.49□□□□□ -0.89
CCDC93-202ENST00000376300 RBM19Q9Y4C8 960 aaKnown RBP9.48□□□□□ -0.89
CCDC93-202ENST00000376300 ARHGEF11O15085 1522 aa9.48□□□□□ -0.89
CCDC93-202ENST00000376300 MINK1Q8N4C8 1332 aaPredicted RBP9.48□□□□□ -0.89
CCDC93-202ENST00000376300 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
CCDC93-202ENST00000376300 BECN1Q14457 450 aa9.48□□□□□ -0.89
CCDC93-202ENST00000376300 EIF4G3O43432 1585 aaKnown RBP9.47□□□□□ -0.89
CCDC93-202ENST00000376300 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.47□□□□□ -0.89
CCDC93-202ENST00000376300 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.89
CCDC93-202ENST00000376300 PHLDB1Q86UU1 1377 aa9.46□□□□□ -0.9
CCDC93-202ENST00000376300 UBAP1LF5GYI3 381 aa9.46□□□□□ -0.9
CCDC93-202ENST00000376300 TAOK2Q9UL54 1235 aa9.45□□□□□ -0.9
CCDC93-202ENST00000376300 MYOM3Q5VTT5 1437 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms