RNA–Protein interactions for RNA: ENST00000376279.7

PCCA-201, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2 BASIC

Gene PCCA, Length 2,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-201ENST00000376279 ABCC5O15440 1437 aa27.14■■□□□ 1.94
PCCA-201ENST00000376279 TROQ12816 1431 aaPredicted RBP27.14■■□□□ 1.94
PCCA-201ENST00000376279 MPHOSPH9Q99550 1183 aa27.12■■□□□ 1.93
PCCA-201ENST00000376279 ROCK1Q13464 1354 aa27.12■■□□□ 1.93
PCCA-201ENST00000376279 DNMT1P26358 1616 aaKnown RBP27.12■■□□□ 1.93
PCCA-201ENST00000376279 KDM5BQ9UGL1 1544 aa27.11■■□□□ 1.93
PCCA-201ENST00000376279 KCNH8Q96L42 1107 aa27.1■■□□□ 1.93
PCCA-201ENST00000376279 MYT1Q01538 1121 aa27.09■■□□□ 1.93
PCCA-201ENST00000376279 CFDP1Q9UEE9 299 aaPredicted RBP27.06■■□□□ 1.92
PCCA-201ENST00000376279 FOXD1Q16676 465 aa27.03■■□□□ 1.92
PCCA-201ENST00000376279 KIF14Q15058 1648 aa27.03■■□□□ 1.92
PCCA-201ENST00000376279 GPATCH8Q9UKJ3 1502 aaKnown RBP27.03■■□□□ 1.92
PCCA-201ENST00000376279 CAMSAP2Q08AD1 1489 aa27.02■■□□□ 1.92
PCCA-201ENST00000376279 ADCY10Q96PN6 1610 aa27■■□□□ 1.91
PCCA-201ENST00000376279 ITSN2Q9NZM3 1697 aa26.99■■□□□ 1.91
PCCA-201ENST00000376279 ZNF777Q9ULD5 760 aaPredicted RBP26.99■■□□□ 1.91
PCCA-201ENST00000376279 ABCA8O94911 1581 aa26.97■■□□□ 1.91
PCCA-201ENST00000376279 PLEKHD1A6NEE1 506 aa26.95■■□□□ 1.9
PCCA-201ENST00000376279 ATP10BO94823 1461 aa26.93■■□□□ 1.9
PCCA-201ENST00000376279 ANKRD30BQ9BXX2 1392 aa26.93■■□□□ 1.9
PCCA-201ENST00000376279 L3MBTL2Q969R5 705 aa26.92■■□□□ 1.9
PCCA-201ENST00000376279 SLC4A1APQ9BWU0 796 aaKnown RBP26.91■■□□□ 1.9
PCCA-201ENST00000376279 ANP32CO43423 234 aa26.91■■□□□ 1.9
PCCA-201ENST00000376279 NCOA1Q15788 1441 aa26.91■■□□□ 1.9
PCCA-201ENST00000376279 HSPA5P11021 654 aaKnown RBP26.87■■□□□ 1.89
PCCA-201ENST00000376279 ADGBQ8N7X0 1667 aa26.86■■□□□ 1.89
PCCA-201ENST00000376279 RPRD2Q5VT52 1461 aaKnown RBP26.86■■□□□ 1.89
PCCA-201ENST00000376279 ABCC10Q5T3U5 1492 aa26.85■■□□□ 1.89
PCCA-201ENST00000376279 ADGRL2O95490 1459 aa26.84■■□□□ 1.89
PCCA-201ENST00000376279 CCER2I3L3R5 266 aa26.84■■□□□ 1.89
PCCA-201ENST00000376279 CROCC2H7BZ55 1655 aa26.83■■□□□ 1.89
PCCA-201ENST00000376279 PTPRGP23470 1445 aa26.83■■□□□ 1.89
PCCA-201ENST00000376279 PZPP20742 1482 aa26.82■■□□□ 1.88
PCCA-201ENST00000376279 CDC42BPAQ5VT25 1732 aa26.82■■□□□ 1.88
PCCA-201ENST00000376279 ANKRD30AQ9BXX3 1397 aa26.81■■□□□ 1.88
PCCA-201ENST00000376279 EIF4G2P78344 907 aaKnown RBP eCLIP26.8■■□□□ 1.88
PCCA-201ENST00000376279 WASHC2AQ641Q2 1341 aa26.77■■□□□ 1.88
PCCA-201ENST00000376279 TEX14Q8IWB6 1497 aa26.77■■□□□ 1.88
PCCA-201ENST00000376279 NBPF8Q3BBV2 869 aa26.76■■□□□ 1.87
PCCA-201ENST00000376279 CHD1O14646 1710 aa26.76■■□□□ 1.87
PCCA-201ENST00000376279 ANKRD50Q9ULJ7 1429 aa26.73■■□□□ 1.87
PCCA-201ENST00000376279 SUPT16HQ9Y5B9 1047 aaKnown RBP26.73■■□□□ 1.87
PCCA-201ENST00000376279 C9orf84Q5VXU9 1444 aa26.72■■□□□ 1.87
PCCA-201ENST00000376279 KIAA1107Q9UPP5 1409 aa26.7■■□□□ 1.87
PCCA-201ENST00000376279 SHANK2Q9UPX8 1470 aa26.7■■□□□ 1.86
PCCA-201ENST00000376279 PKD2Q13563 968 aa26.69■■□□□ 1.86
PCCA-201ENST00000376279 TSPY4P0CV99 314 aa26.68■■□□□ 1.86
PCCA-201ENST00000376279 TSPY10P0CW01 314 aa26.68■■□□□ 1.86
PCCA-201ENST00000376279 HNRNPMP52272 730 aaKnown RBP eCLIP26.68■■□□□ 1.863e-6■■■□□ 18.7
PCCA-201ENST00000376279 C11orf95C9JLR9 678 aaPredicted RBP26.65■■□□□ 1.86
PCCA-201ENST00000376279 SHROOM2Q13796 1616 aa26.63■■□□□ 1.85
PCCA-201ENST00000376279 NUP155O75694 1391 aa26.62■■□□□ 1.85
PCCA-201ENST00000376279 MBD5Q9P267 1494 aa26.61■■□□□ 1.85
PCCA-201ENST00000376279 ARHGEF5Q12774 1597 aa26.6■■□□□ 1.85
PCCA-201ENST00000376279 CCDC7Q96M83 1385 aa26.6■■□□□ 1.85
PCCA-201ENST00000376279 KIF15Q9NS87 1388 aa26.59■■□□□ 1.85
PCCA-201ENST00000376279 CDC42BPBQ9Y5S2 1711 aa26.58■■□□□ 1.85
PCCA-201ENST00000376279 SAMD9LQ8IVG5 1584 aa26.58■■□□□ 1.85
PCCA-201ENST00000376279 ERCC6L2Q5T890 1561 aa26.58■■□□□ 1.84
PCCA-201ENST00000376279 SPATA31E1Q6ZUB1 1445 aa26.57■■□□□ 1.84
PCCA-201ENST00000376279 CNTLNQ9NXG0 1405 aa26.57■■□□□ 1.84
PCCA-201ENST00000376279 PREX2Q70Z35 1606 aa26.57■■□□□ 1.84
PCCA-201ENST00000376279 CCDC141Q6ZP82 1450 aa26.55■■□□□ 1.84
PCCA-201ENST00000376279 KDM5DQ9BY66 1539 aa26.52■■□□□ 1.84
PCCA-201ENST00000376279 ZNF326Q5BKZ1 582 aaKnown RBP26.51■■□□□ 1.84
PCCA-201ENST00000376279 RSPH4AQ5TD94 716 aa26.5■■□□□ 1.83
PCCA-201ENST00000376279 TTC37Q6PGP7 1564 aa26.5■■□□□ 1.83
PCCA-201ENST00000376279 ABCC2Q92887 1545 aa26.5■■□□□ 1.83
PCCA-201ENST00000376279 KIF7Q2M1P5 1343 aa26.49■■□□□ 1.83
PCCA-201ENST00000376279 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.49■■□□□ 1.83
PCCA-201ENST00000376279 ARHGAP5Q13017 1502 aa26.48■■□□□ 1.83
PCCA-201ENST00000376279 SYCP2Q9BX26 1530 aa26.46■■□□□ 1.83
PCCA-201ENST00000376279 PRKRIP1Q9H875 184 aaPredicted RBP26.42■■□□□ 1.82
PCCA-201ENST00000376279 USP47Q96K76 1375 aa26.42■■□□□ 1.82
PCCA-201ENST00000376279 FKBP8Q14318 412 aa26.41■■□□□ 1.82
PCCA-201ENST00000376279 POLR1AO95602 1720 aaPredicted RBP26.41■■□□□ 1.82
PCCA-201ENST00000376279 HNRNPUQ00839 825 aaKnown RBP eCLIP26.4■■□□□ 1.82
PCCA-201ENST00000376279 CCDC184Q52MB2 194 aa26.4■■□□□ 1.82
PCCA-201ENST00000376279 UHRF1BP1Q6BDS2 1440 aa26.4■■□□□ 1.82
PCCA-201ENST00000376279 FAM135AQ9P2D6 1515 aa26.38■■□□□ 1.81
PCCA-201ENST00000376279 CLASP1Q7Z460 1538 aa26.38■■□□□ 1.81
PCCA-201ENST00000376279 MYO5CQ9NQX4 1742 aa26.37■■□□□ 1.81
PCCA-201ENST00000376279 MAST1Q9Y2H9 1570 aa26.37■■□□□ 1.81
PCCA-201ENST00000376279 ARHGEF12Q9NZN5 1544 aa26.36■■□□□ 1.81
PCCA-201ENST00000376279 KDM2AQ9Y2K7 1162 aa26.36■■□□□ 1.81
PCCA-201ENST00000376279 BCANQ96GW7 911 aa26.35■■□□□ 1.81
PCCA-201ENST00000376279 KDM5CP41229 1560 aa26.34■■□□□ 1.81
PCCA-201ENST00000376279 RALGAPBQ86X10 1494 aa26.34■■□□□ 1.81
PCCA-201ENST00000376279 BCORL1Q5H9F3 1711 aa26.34■■□□□ 1.81
PCCA-201ENST00000376279 PLEKHH2Q8IVE3 1493 aa26.33■■□□□ 1.81
PCCA-201ENST00000376279 TSHZ2Q9NRE2 1034 aa26.33■■□□□ 1.81
PCCA-201ENST00000376279 ZCCHC11Q5TAX3 1644 aaKnown RBP26.33■■□□□ 1.81
PCCA-201ENST00000376279 DCAF11Q8TEB1 546 aa26.33■■□□□ 1.8
PCCA-201ENST00000376279 NEFLP07196 543 aa26.31■■□□□ 1.8
PCCA-201ENST00000376279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.31■■□□□ 1.84e-6■□□□□ 8.4
PCCA-201ENST00000376279 CARD11Q9BXL7 1154 aa26.31■■□□□ 1.8
PCCA-201ENST00000376279 POLR3GLQ9BT43 218 aa26.3■■□□□ 1.8
PCCA-201ENST00000376279 UHRF1BP1LA0JNW5 1464 aa26.3■■□□□ 1.8
PCCA-201ENST00000376279 PLCH2O75038 1416 aa26.29■■□□□ 1.8
PCCA-201ENST00000376279 MRS2Q9HD23 443 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms