RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 KANK4Q5T7N3 995 aaPredicted RBP32.38■■■□□ 2.77
HLA-C-201ENST00000376228 RICTORQ6R327 1708 aa32.38■■■□□ 2.77
HLA-C-201ENST00000376228 ARHGAP5Q13017 1502 aa32.36■■■□□ 2.77
HLA-C-201ENST00000376228 CDC42BPAQ5VT25 1732 aa32.34■■■□□ 2.77
HLA-C-201ENST00000376228 PREX2Q70Z35 1606 aa32.34■■■□□ 2.77
HLA-C-201ENST00000376228 DENND4BO75064 1496 aaPredicted RBP32.33■■■□□ 2.77
HLA-C-201ENST00000376228 LRRC9Q6ZRR7 1453 aa32.33■■■□□ 2.77
HLA-C-201ENST00000376228 ADGRL1O94910 1474 aa32.33■■■□□ 2.77
HLA-C-201ENST00000376228 MTUS2Q5JR59 1369 aa32.3■■■□□ 2.76
HLA-C-201ENST00000376228 AEBP2Q6ZN18 517 aaPredicted RBP32.3■■■□□ 2.76
HLA-C-201ENST00000376228 EFCAB2Q5VUJ9 269 aa32.29■■■□□ 2.76
HLA-C-201ENST00000376228 SCAPERQ9BY12 1400 aa32.26■■■□□ 2.76
HLA-C-201ENST00000376228 KDM4FA0A1W2PPD8 638 aa32.26■■■□□ 2.75
HLA-C-201ENST00000376228 EHBP1L1Q8N3D4 1523 aa32.25■■■□□ 2.75
HLA-C-201ENST00000376228 POGZQ7Z3K3 1410 aa32.21■■■□□ 2.75
HLA-C-201ENST00000376228 ZMYM4Q5VZL5 1548 aa32.19■■■□□ 2.74
HLA-C-201ENST00000376228 ARHGEF40Q8TER5 1519 aa32.18■■■□□ 2.74
HLA-C-201ENST00000376228 GPATCH8Q9UKJ3 1502 aaKnown RBP32.18■■■□□ 2.74
HLA-C-201ENST00000376228 RRBP1Q9P2E9 1410 aaKnown RBP32.17■■■□□ 2.74
HLA-C-201ENST00000376228 ABCC1P33527 1531 aa32.15■■■□□ 2.74
HLA-C-201ENST00000376228 ITSN2Q9NZM3 1697 aa32.15■■■□□ 2.74
HLA-C-201ENST00000376228 CCNB3Q8WWL7 1395 aa32.13■■■□□ 2.73
HLA-C-201ENST00000376228 SUPT6HQ7KZ85 1726 aaKnown RBP32.13■■■□□ 2.73
HLA-C-201ENST00000376228 SAMD9LQ8IVG5 1584 aa32.12■■■□□ 2.73
HLA-C-201ENST00000376228 ZFYVE16Q7Z3T8 1539 aa32.12■■■□□ 2.73
HLA-C-201ENST00000376228 ZNF777Q9ULD5 760 aaPredicted RBP32.11■■■□□ 2.73
HLA-C-201ENST00000376228 YEATS2Q9ULM3 1422 aa32.11■■■□□ 2.73
HLA-C-201ENST00000376228 ARHGEF12Q9NZN5 1544 aa32.11■■■□□ 2.73
HLA-C-201ENST00000376228 ZNF518AQ6AHZ1 1483 aa32.1■■■□□ 2.73
HLA-C-201ENST00000376228 AFAP1Q8N556 730 aa32.07■■■□□ 2.72
HLA-C-201ENST00000376228 KDM5CP41229 1560 aa32.07■■■□□ 2.72
HLA-C-201ENST00000376228 SIGLEC1Q9BZZ2 1709 aa32.05■■■□□ 2.72
HLA-C-201ENST00000376228 NCOA2Q15596 1464 aa32.05■■■□□ 2.72
HLA-C-201ENST00000376228 MAGI2Q86UL8 1455 aa32.05■■■□□ 2.72
HLA-C-201ENST00000376228 TRAPPC8Q9Y2L5 1435 aa32.05■■■□□ 2.72
HLA-C-201ENST00000376228 CFDP1Q9UEE9 299 aaPredicted RBP32.05■■■□□ 2.72
HLA-C-201ENST00000376228 SYCP2Q9BX26 1530 aa32.04■■■□□ 2.72
HLA-C-201ENST00000376228 HECW2Q9P2P5 1572 aa32.02■■■□□ 2.72
HLA-C-201ENST00000376228 HRCP23327 699 aa32.01■■■□□ 2.72
HLA-C-201ENST00000376228 ARID4BQ4LE39 1312 aaPredicted RBP32■■■□□ 2.71
HLA-C-201ENST00000376228 BCORL1Q5H9F3 1711 aa31.98■■■□□ 2.71
HLA-C-201ENST00000376228 MYT1LQ9UL68 1186 aa31.97■■■□□ 2.71
HLA-C-201ENST00000376228 HNRNPMP52272 730 aaKnown RBP eCLIP31.95■■■□□ 2.71
HLA-C-201ENST00000376228 ADAMTSL3P82987 1691 aa31.94■■■□□ 2.7
HLA-C-201ENST00000376228 ZNF644Q9H582 1327 aaPredicted RBP31.94■■■□□ 2.7
HLA-C-201ENST00000376228 ABCA6Q8N139 1617 aa31.93■■■□□ 2.7
HLA-C-201ENST00000376228 DIP2CQ9Y2E4 1556 aa31.93■■■□□ 2.7
HLA-C-201ENST00000376228 ATP10AO60312 1499 aa31.91■■■□□ 2.7
HLA-C-201ENST00000376228 PLEKHH2Q8IVE3 1493 aa31.91■■■□□ 2.7
HLA-C-201ENST00000376228 KIDINS220Q9ULH0 1771 aa31.91■■■□□ 2.7
HLA-C-201ENST00000376228 MLH3Q9UHC1 1453 aa31.91■■■□□ 2.7
HLA-C-201ENST00000376228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.9■■■□□ 2.7
HLA-C-201ENST00000376228 C9orf84Q5VXU9 1444 aa31.89■■■□□ 2.7
HLA-C-201ENST00000376228 KIAA1107Q9UPP5 1409 aa31.89■■■□□ 2.7
HLA-C-201ENST00000376228 MADDQ8WXG6 1647 aa31.88■■■□□ 2.69
HLA-C-201ENST00000376228 CAMSAP2Q08AD1 1489 aa31.84■■■□□ 2.69
HLA-C-201ENST00000376228 MYOM3Q5VTT5 1437 aa31.81■■■□□ 2.68
HLA-C-201ENST00000376228 MLECQ14165 292 aa31.81■■■□□ 2.68
HLA-C-201ENST00000376228 INO80Q9ULG1 1556 aaPredicted RBP31.81■■■□□ 2.68
HLA-C-201ENST00000376228 RIMS1Q86UR5 1692 aaKnown RBP31.81■■■□□ 2.68
HLA-C-201ENST00000376228 FGD6Q6ZV73 1430 aa31.81■■■□□ 2.68
HLA-C-201ENST00000376228 MBD5Q9P267 1494 aa31.81■■■□□ 2.68
HLA-C-201ENST00000376228 SPAG9O60271 1321 aaKnown RBP31.8■■■□□ 2.68
HLA-C-201ENST00000376228 ATP7AQ04656 1500 aa31.8■■■□□ 2.68
HLA-C-201ENST00000376228 REREQ9P2R6 1566 aa31.78■■■□□ 2.68
HLA-C-201ENST00000376228 FER1L4A9Z1Z3 1794 aa31.77■■■□□ 2.68
HLA-C-201ENST00000376228 PTPRMP28827 1452 aa31.75■■■□□ 2.67
HLA-C-201ENST00000376228 ZEB1P37275 1124 aaPredicted RBP31.74■■■□□ 2.67
HLA-C-201ENST00000376228 CCDC141Q6ZP82 1450 aa31.7■■■□□ 2.67
HLA-C-201ENST00000376228 MIA2Q96PC5 1412 aa31.7■■■□□ 2.66
HLA-C-201ENST00000376228 ARHGEF5Q12774 1597 aa31.67■■■□□ 2.66
HLA-C-201ENST00000376228 TCOF1Q13428 1488 aaKnown RBP31.66■■■□□ 2.66
HLA-C-201ENST00000376228 ADGBQ8N7X0 1667 aa31.65■■■□□ 2.66
HLA-C-201ENST00000376228 PTPN23Q9H3S7 1636 aa31.65■■■□□ 2.66
HLA-C-201ENST00000376228 AGLP35573 1532 aa31.65■■■□□ 2.66
HLA-C-201ENST00000376228 PLPPR3Q6T4P5 718 aa31.64■■■□□ 2.66
HLA-C-201ENST00000376228 PLXNC1O60486 1568 aa31.62■■■□□ 2.65
HLA-C-201ENST00000376228 FAM50AQ14320 339 aaKnown RBP31.62■■■□□ 2.65
HLA-C-201ENST00000376228 A2MP01023 1474 aa31.61■■■□□ 2.65
HLA-C-201ENST00000376228 RTEL1-TNFRSF6BF6WH68 1400 aa31.6■■■□□ 2.65
HLA-C-201ENST00000376228 RSPH4AQ5TD94 716 aa31.58■■■□□ 2.65
HLA-C-201ENST00000376228 CCER1Q8TC90 406 aaPredicted RBP31.56■■■□□ 2.64
HLA-C-201ENST00000376228 TSPY4P0CV99 314 aa31.52■■■□□ 2.64
HLA-C-201ENST00000376228 TSPY10P0CW01 314 aa31.52■■■□□ 2.64
HLA-C-201ENST00000376228 CROCC2H7BZ55 1655 aa31.51■■■□□ 2.64
HLA-C-201ENST00000376228 MAST1Q9Y2H9 1570 aa31.51■■■□□ 2.63
HLA-C-201ENST00000376228 ITGAEP38570 1179 aa31.48■■■□□ 2.63
HLA-C-201ENST00000376228 CEBPAP49715 358 aaPredicted RBP31.47■■■□□ 2.63
HLA-C-201ENST00000376228 C3P01024 1663 aa31.46■■■□□ 2.63
HLA-C-201ENST00000376228 DNMT1P26358 1616 aaKnown RBP31.45■■■□□ 2.63
HLA-C-201ENST00000376228 DHX29Q7Z478 1369 aaKnown RBP31.45■■■□□ 2.63
HLA-C-201ENST00000376228 SETD5Q9C0A6 1442 aa31.45■■■□□ 2.62
HLA-C-201ENST00000376228 ESF1Q9H501 851 aaKnown RBP31.44■■■□□ 2.62
HLA-C-201ENST00000376228 CLTCQ00610 1675 aaKnown RBP31.43■■■□□ 2.62
HLA-C-201ENST00000376228 GGT6Q6P531 493 aa31.43■■■□□ 2.62
HLA-C-201ENST00000376228 ABCC5O15440 1437 aa31.43■■■□□ 2.62
HLA-C-201ENST00000376228 DAPK1P53355 1430 aa31.41■■■□□ 2.62
HLA-C-201ENST00000376228 PTPRKQ15262 1439 aa31.4■■■□□ 2.62
HLA-C-201ENST00000376228 MROH2AA6NES4 1674 aa31.38■■■□□ 2.61
HLA-C-201ENST00000376228 SHANK2Q9UPX8 1470 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms