RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 TAOK2Q9UL54 1235 aa10.48□□□□□ -0.73
HSPG2-203ENST00000374695 CCER2I3L3R5 266 aa10.48□□□□□ -0.73
HSPG2-203ENST00000374695 RB1CC1Q8TDY2 1594 aa10.48□□□□□ -0.73
HSPG2-203ENST00000374695 FHAD1B1AJZ9 1412 aa10.48□□□□□ -0.73
HSPG2-203ENST00000374695 TIMELESSQ9UNS1 1208 aa10.48□□□□□ -0.73
HSPG2-203ENST00000374695 RRP7BPQ9NSQ0 103 aa10.47□□□□□ -0.73
HSPG2-203ENST00000374695 HDAC5Q9UQL6 1122 aa10.47□□□□□ -0.73
HSPG2-203ENST00000374695 DDX11L8A8MPP1 907 aa10.47□□□□□ -0.73
HSPG2-203ENST00000374695 NCBP3Q53F19 620 aaKnown RBP10.47□□□□□ -0.73
HSPG2-203ENST00000374695 TCERG1O14776 1098 aaKnown RBP10.47□□□□□ -0.73
HSPG2-203ENST00000374695 CEP89Q96ST8 783 aa10.47□□□□□ -0.73
HSPG2-203ENST00000374695 TMF1P82094 1093 aa10.47□□□□□ -0.73
HSPG2-203ENST00000374695 CHMP7Q8WUX9 453 aaPredicted RBP10.46□□□□□ -0.73
HSPG2-203ENST00000374695 CHMP4CQ96CF2 233 aa10.46□□□□□ -0.73
HSPG2-203ENST00000374695 POGKQ9P215 609 aa10.46□□□□□ -0.73
HSPG2-203ENST00000374695 FANCIQ9NVI1 1328 aa10.46□□□□□ -0.73
HSPG2-203ENST00000374695 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
HSPG2-203ENST00000374695 HIRIP3Q9BW71 556 aaPredicted RBP10.45□□□□□ -0.74
HSPG2-203ENST00000374695 PLEKHD1A6NEE1 506 aa10.45□□□□□ -0.74
HSPG2-203ENST00000374695 KIF3AQ9Y496 699 aa10.45□□□□□ -0.74
HSPG2-203ENST00000374695 KTN1Q86UP2 1357 aaKnown RBP10.45□□□□□ -0.74
HSPG2-203ENST00000374695 RWDD1Q9H446 243 aaPredicted RBP10.44□□□□□ -0.74
HSPG2-203ENST00000374695 ISY1Q9ULR0 285 aaKnown RBP10.44□□□□□ -0.74
HSPG2-203ENST00000374695 TAF3Q5VWG9 929 aa10.44□□□□□ -0.74
HSPG2-203ENST00000374695 NEUROD2Q15784 382 aa10.44□□□□□ -0.74
HSPG2-203ENST00000374695 RTF1Q92541 710 aaKnown RBP10.44□□□□□ -0.74
HSPG2-203ENST00000374695 TEX35Q5T0J7 233 aa10.43□□□□□ -0.74
HSPG2-203ENST00000374695 EIF3AQ14152 1382 aaKnown RBP10.43□□□□□ -0.74
HSPG2-203ENST00000374695 TPM1P09493 284 aa10.43□□□□□ -0.74
HSPG2-203ENST00000374695 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
HSPG2-203ENST00000374695 KIF16BQ96L93 1317 aa10.43□□□□□ -0.74
HSPG2-203ENST00000374695 TSR1Q2NL82 804 aaKnown RBP10.43□□□□□ -0.74
HSPG2-203ENST00000374695 PMFBP1Q8TBY8 1022 aa10.42□□□□□ -0.74
HSPG2-203ENST00000374695 U2SURPO15042 1029 aaKnown RBP10.42□□□□□ -0.74
HSPG2-203ENST00000374695 ST18O60284 1047 aa10.42□□□□□ -0.74
HSPG2-203ENST00000374695 PHLDB1Q86UU1 1377 aa10.42□□□□□ -0.74
HSPG2-203ENST00000374695 NOM1Q5C9Z4 860 aaKnown RBP10.42□□□□□ -0.74
HSPG2-203ENST00000374695 HDGFP51858 240 aaKnown RBP10.42□□□□□ -0.74
HSPG2-203ENST00000374695 SPRYD3Q8NCJ5 442 aa10.41□□□□□ -0.74
HSPG2-203ENST00000374695 TPM2P07951 284 aa10.41□□□□□ -0.74
HSPG2-203ENST00000374695 HMMRO75330 724 aa10.4□□□□□ -0.74
HSPG2-203ENST00000374695 RRP12Q5JTH9 1297 aaKnown RBP10.4□□□□□ -0.74
HSPG2-203ENST00000374695 TMX4Q9H1E5 349 aaPredicted RBP10.4□□□□□ -0.74
HSPG2-203ENST00000374695 RGL3Q3MIN7 710 aa10.4□□□□□ -0.74
HSPG2-203ENST00000374695 ATP6V1DQ9Y5K8 247 aa10.39□□□□□ -0.75
HSPG2-203ENST00000374695 RASSF8Q8NHQ8 419 aa10.39□□□□□ -0.75
HSPG2-203ENST00000374695 PLEKHG5O94827 1062 aa10.39□□□□□ -0.75
HSPG2-203ENST00000374695 HSP90B1P14625 803 aaKnown RBP10.39□□□□□ -0.75
HSPG2-203ENST00000374695 CFDP1Q9UEE9 299 aaPredicted RBP10.39□□□□□ -0.75
HSPG2-203ENST00000374695 ARID3AQ99856 593 aa10.39□□□□□ -0.75
HSPG2-203ENST00000374695 SKOR2Q2VWA4 1001 aaPredicted RBP10.38□□□□□ -0.75
HSPG2-203ENST00000374695 IPO9Q96P70 1041 aaKnown RBP10.38□□□□□ -0.75
HSPG2-203ENST00000374695 RALBP1Q15311 655 aa10.38□□□□□ -0.75
HSPG2-203ENST00000374695 PKNOX2Q96KN3 472 aa10.38□□□□□ -0.75
HSPG2-203ENST00000374695 CC2D1BQ5T0F9 858 aaKnown RBP10.38□□□□□ -0.75
HSPG2-203ENST00000374695 SPAG9O60271 1321 aaKnown RBP10.38□□□□□ -0.75
HSPG2-203ENST00000374695 ARHGAP35Q9NRY4 1499 aa10.37□□□□□ -0.75
HSPG2-203ENST00000374695 GOLGA6L19H0YKK7 550 aa10.37□□□□□ -0.75
HSPG2-203ENST00000374695 CDR1P51861 262 aa10.36□□□□□ -0.75
HSPG2-203ENST00000374695 SLKQ9H2G2 1235 aaPredicted RBP10.36□□□□□ -0.75
HSPG2-203ENST00000374695 RCAN3Q9UKA8 241 aa10.36□□□□□ -0.75
HSPG2-203ENST00000374695 GZF1Q9H116 711 aaPredicted RBP10.36□□□□□ -0.75
HSPG2-203ENST00000374695 PRKCSHP14314 528 aaPredicted RBP10.36□□□□□ -0.75
HSPG2-203ENST00000374695 MORC1Q86VD1 984 aa10.36□□□□□ -0.75
HSPG2-203ENST00000374695 CCNB3Q8WWL7 1395 aa10.36□□□□□ -0.75
HSPG2-203ENST00000374695 ITPRIPQ8IWB1 547 aa10.36□□□□□ -0.75
HSPG2-203ENST00000374695 ACBD3Q9H3P7 528 aa10.35□□□□□ -0.75
HSPG2-203ENST00000374695 AK7Q96M32 723 aa10.35□□□□□ -0.75
HSPG2-203ENST00000374695 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.35□□□□□ -0.75
HSPG2-203ENST00000374695 TNIKQ9UKE5 1360 aa10.35□□□□□ -0.75
HSPG2-203ENST00000374695 BAZ1AQ9NRL2 1556 aaPredicted RBP10.35□□□□□ -0.75
HSPG2-203ENST00000374695 TPD52L1Q16890 204 aaPredicted RBP10.35□□□□□ -0.75
HSPG2-203ENST00000374695 IPO7O95373 1038 aaKnown RBP10.34□□□□□ -0.75
HSPG2-203ENST00000374695 HOOK1Q9UJC3 728 aaKnown RBP10.34□□□□□ -0.75
HSPG2-203ENST00000374695 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.34□□□□□ -0.75
HSPG2-203ENST00000374695 ROCK2O75116 1388 aaKnown RBP10.33□□□□□ -0.76
HSPG2-203ENST00000374695 RRP9O43818 475 aaKnown RBP10.33□□□□□ -0.76
HSPG2-203ENST00000374695 VSIG10Q8N0Z9 540 aa10.33□□□□□ -0.76
HSPG2-203ENST00000374695 LMOD2Q6P5Q4 547 aa10.33□□□□□ -0.76
HSPG2-203ENST00000374695 ZNF771Q7L3S4 317 aaPredicted RBP10.33□□□□□ -0.76
HSPG2-203ENST00000374695 STK31Q9BXU1 1019 aa10.33□□□□□ -0.76
HSPG2-203ENST00000374695 TSHZ2Q9NRE2 1034 aa10.33□□□□□ -0.76
HSPG2-203ENST00000374695 ANKRD20A12PQ8NF67 263 aa10.33□□□□□ -0.76
HSPG2-203ENST00000374695 TRIM6-TRIM34B2RNG4 842 aa10.33□□□□□ -0.76
HSPG2-203ENST00000374695 LMOD3Q0VAK6 560 aa10.32□□□□□ -0.76
HSPG2-203ENST00000374695 BAZ1BQ9UIG0 1483 aaKnown RBP10.32□□□□□ -0.76
HSPG2-203ENST00000374695 SF3A1Q15459 793 aaKnown RBP10.32□□□□□ -0.76
HSPG2-203ENST00000374695 PODXL2Q9NZ53 605 aa10.32□□□□□ -0.76
HSPG2-203ENST00000374695 HDGFL2Q7Z4V5 671 aaPredicted RBP10.32□□□□□ -0.76
HSPG2-203ENST00000374695 GORABQ5T7V8 394 aa10.32□□□□□ -0.76
HSPG2-203ENST00000374695 ARGLU1Q9NWB6 273 aaPredicted RBP10.32□□□□□ -0.76
HSPG2-203ENST00000374695 CWC15Q9P013 229 aaKnown RBP10.32□□□□□ -0.76
HSPG2-203ENST00000374695 NACADO15069 1562 aa10.31□□□□□ -0.76
HSPG2-203ENST00000374695 DCTN1Q14203 1278 aa10.31□□□□□ -0.76
HSPG2-203ENST00000374695 WRNQ14191 1432 aaPredicted RBP eCLIP10.31□□□□□ -0.76
HSPG2-203ENST00000374695 H3BQV1 296 aa10.31□□□□□ -0.76
HSPG2-203ENST00000374695 IFFO2Q5TF58 517 aa10.31□□□□□ -0.76
HSPG2-203ENST00000374695 RUFY1Q96T51 708 aa10.31□□□□□ -0.76
HSPG2-203ENST00000374695 LRRFIP1Q32MZ4 808 aaKnown RBP10.31□□□□□ -0.76
HSPG2-203ENST00000374695 SRPK2P78362 688 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms