RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.78□□□□□ -0.36
SP140-202ENST00000373645 PPP4R3CPQ6ZMV5 832 aa12.77□□□□□ -0.37
SP140-202ENST00000373645 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.37
SP140-202ENST00000373645 AKNAQ7Z591 1439 aa12.77□□□□□ -0.37
SP140-202ENST00000373645 FANCAO15360 1455 aa12.77□□□□□ -0.37
SP140-202ENST00000373645 CDK13Q14004 1512 aaKnown RBP12.75□□□□□ -0.37
SP140-202ENST00000373645 ZMYM4Q5VZL5 1548 aa12.75□□□□□ -0.37
SP140-202ENST00000373645 ZFYVE16Q7Z3T8 1539 aa12.74□□□□□ -0.37
SP140-202ENST00000373645 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
SP140-202ENST00000373645 MLECQ14165 292 aa12.72□□□□□ -0.37
SP140-202ENST00000373645 HECW1Q76N89 1606 aa12.72□□□□□ -0.37
SP140-202ENST00000373645 PLEKHD1A6NEE1 506 aa12.71□□□□□ -0.37
SP140-202ENST00000373645 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.37
SP140-202ENST00000373645 CFAP74Q9C0B2 1584 aa12.71□□□□□ -0.37
SP140-202ENST00000373645 EFCAB5A4FU69 1503 aa12.7□□□□□ -0.38
SP140-202ENST00000373645 FER1L4A9Z1Z3 1794 aa12.7□□□□□ -0.38
SP140-202ENST00000373645 POGZQ7Z3K3 1410 aa12.7□□□□□ -0.38
SP140-202ENST00000373645 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
SP140-202ENST00000373645 SCAPERQ9BY12 1400 aa12.68□□□□□ -0.38
SP140-202ENST00000373645 ARHGEF12Q9NZN5 1544 aa12.66□□□□□ -0.38
SP140-202ENST00000373645 PLCH2O75038 1416 aa12.65□□□□□ -0.38
SP140-202ENST00000373645 CEBPAP49715 358 aaPredicted RBP12.65□□□□□ -0.38
SP140-202ENST00000373645 CERKQ8TCT0 537 aa12.65□□□□□ -0.38
SP140-202ENST00000373645 EHMT2Q96KQ7 1210 aa12.65□□□□□ -0.38
SP140-202ENST00000373645 MAGI2Q86UL8 1455 aa12.65□□□□□ -0.38
SP140-202ENST00000373645 KIF14Q15058 1648 aa12.64□□□□□ -0.39
SP140-202ENST00000373645 EEA1Q15075 1411 aa12.63□□□□□ -0.39
SP140-202ENST00000373645 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
SP140-202ENST00000373645 ATP10AO60312 1499 aa12.62□□□□□ -0.39
SP140-202ENST00000373645 PREX1Q8TCU6 1659 aa12.61□□□□□ -0.39
SP140-202ENST00000373645 STRCQ7RTU9 1775 aa12.61□□□□□ -0.39
SP140-202ENST00000373645 MYO5CQ9NQX4 1742 aa12.6□□□□□ -0.39
SP140-202ENST00000373645 ATP1B4Q9UN42 357 aaPredicted RBP12.59□□□□□ -0.39
SP140-202ENST00000373645 KDM5CP41229 1560 aa12.59□□□□□ -0.39
SP140-202ENST00000373645 ARHGAP35Q9NRY4 1499 aa12.59□□□□□ -0.39
SP140-202ENST00000373645 ILDR2Q71H61 639 aa12.58□□□□□ -0.4
SP140-202ENST00000373645 AFAP1Q8N556 730 aa12.58□□□□□ -0.4
SP140-202ENST00000373645 DIP2CQ9Y2E4 1556 aa12.58□□□□□ -0.4
SP140-202ENST00000373645 LRRIQ1Q96JM4 1722 aa12.57□□□□□ -0.4
SP140-202ENST00000373645 ABCA6Q8N139 1617 aa12.57□□□□□ -0.4
SP140-202ENST00000373645 ZNF518AQ6AHZ1 1483 aa12.57□□□□□ -0.4
SP140-202ENST00000373645 ARHGAP5Q13017 1502 aa12.57□□□□□ -0.4
SP140-202ENST00000373645 TROQ12816 1431 aaPredicted RBP12.55□□□□□ -0.4
SP140-202ENST00000373645 EFCAB2Q5VUJ9 269 aa12.55□□□□□ -0.4
SP140-202ENST00000373645 POTEHQ6S545 545 aa12.55□□□□□ -0.4
SP140-202ENST00000373645 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
SP140-202ENST00000373645 DISP3Q9P2K9 1392 aa12.54□□□□□ -0.4
SP140-202ENST00000373645 FMN1Q68DA7 1419 aa12.54□□□□□ -0.4
SP140-202ENST00000373645 C3P01024 1663 aa12.53□□□□□ -0.4
SP140-202ENST00000373645 CDC42BPBQ9Y5S2 1711 aa12.53□□□□□ -0.4
SP140-202ENST00000373645 TRAPPC8Q9Y2L5 1435 aa12.53□□□□□ -0.4
SP140-202ENST00000373645 UBTFP17480 764 aaKnown RBP12.51□□□□□ -0.41
SP140-202ENST00000373645 ABCC1P33527 1531 aa12.51□□□□□ -0.41
SP140-202ENST00000373645 REREQ9P2R6 1566 aa12.51□□□□□ -0.41
SP140-202ENST00000373645 PREX2Q70Z35 1606 aa12.49□□□□□ -0.41
SP140-202ENST00000373645 LTBP4Q8N2S1 1624 aa12.49□□□□□ -0.41
SP140-202ENST00000373645 MYT1LQ9UL68 1186 aa12.49□□□□□ -0.41
SP140-202ENST00000373645 SETD1BQ9UPS6 1966 aaKnown RBP12.49□□□□□ -0.41
SP140-202ENST00000373645 ITSN2Q9NZM3 1697 aa12.48□□□□□ -0.41
SP140-202ENST00000373645 MLH3Q9UHC1 1453 aa12.48□□□□□ -0.41
SP140-202ENST00000373645 CLIP1P30622 1438 aa12.48□□□□□ -0.41
SP140-202ENST00000373645 KIDINS220Q9ULH0 1771 aa12.48□□□□□ -0.41
SP140-202ENST00000373645 SPATA31D1Q6ZQQ2 1576 aa12.47□□□□□ -0.41
SP140-202ENST00000373645 AGLP35573 1532 aa12.47□□□□□ -0.41
SP140-202ENST00000373645 CDK11AQ9UQ88 783 aaPredicted RBP12.47□□□□□ -0.41
SP140-202ENST00000373645 PTPRTO14522 1441 aa12.46□□□□□ -0.41
SP140-202ENST00000373645 NCOA1Q15788 1441 aa12.45□□□□□ -0.42
SP140-202ENST00000373645 CDC42BPAQ5VT25 1732 aa12.45□□□□□ -0.42
SP140-202ENST00000373645 LOC105371045A0A1W2PR82 267 aa12.44□□□□□ -0.42
SP140-202ENST00000373645 SOCS7O14512 581 aa12.44□□□□□ -0.42
SP140-202ENST00000373645 SAMD9LQ8IVG5 1584 aa12.43□□□□□ -0.42
SP140-202ENST00000373645 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
SP140-202ENST00000373645 CAMSAP1Q5T5Y3 1602 aa12.42□□□□□ -0.42
SP140-202ENST00000373645 CASKIN1Q8WXD9 1431 aa12.41□□□□□ -0.42
SP140-202ENST00000373645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
SP140-202ENST00000373645 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.43
SP140-202ENST00000373645 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.43
SP140-202ENST00000373645 ZNF335Q9H4Z2 1342 aaPredicted RBP12.39□□□□□ -0.43
SP140-202ENST00000373645 CNTLNQ9NXG0 1405 aa12.39□□□□□ -0.43
SP140-202ENST00000373645 ESF1Q9H501 851 aaKnown RBP12.39□□□□□ -0.43
SP140-202ENST00000373645 ZNF777Q9ULD5 760 aaPredicted RBP12.39□□□□□ -0.43
SP140-202ENST00000373645 NCKAP5LQ9HCH0 1330 aa12.38□□□□□ -0.43
SP140-202ENST00000373645 MROH2AA6NES4 1674 aa12.38□□□□□ -0.43
SP140-202ENST00000373645 NPATQ14207 1427 aa12.37□□□□□ -0.43
SP140-202ENST00000373645 MYO3AQ8NEV4 1616 aa12.37□□□□□ -0.43
SP140-202ENST00000373645 HNRNPMP52272 730 aaKnown RBP eCLIP12.37□□□□□ -0.43
SP140-202ENST00000373645 ZMYM3Q14202 1370 aa12.37□□□□□ -0.43
SP140-202ENST00000373645 PLXNC1O60486 1568 aa12.37□□□□□ -0.43
SP140-202ENST00000373645 CLTCQ00610 1675 aaKnown RBP12.37□□□□□ -0.43
SP140-202ENST00000373645 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
SP140-202ENST00000373645 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
SP140-202ENST00000373645 INO80Q9ULG1 1556 aaPredicted RBP12.36□□□□□ -0.43
SP140-202ENST00000373645 IQSEC2Q5JU85 1478 aa12.36□□□□□ -0.43
SP140-202ENST00000373645 ZNF142P52746 1687 aaPredicted RBP12.35□□□□□ -0.43
SP140-202ENST00000373645 FYCO1Q9BQS8 1478 aa12.35□□□□□ -0.43
SP140-202ENST00000373645 PTPRKQ15262 1439 aa12.35□□□□□ -0.43
SP140-202ENST00000373645 SPAG9O60271 1321 aaKnown RBP12.35□□□□□ -0.43
SP140-202ENST00000373645 CEP170BQ9Y4F5 1589 aaPredicted RBP12.35□□□□□ -0.43
SP140-202ENST00000373645 A2MP01023 1474 aa12.33□□□□□ -0.44
SP140-202ENST00000373645 TCOF1Q13428 1488 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms