RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 AEBP2Q6ZN18 517 aaPredicted RBP20.23■□□□□ 0.83
SP140-202ENST00000373645 NISCHQ9Y2I1 1504 aa19.25■□□□□ 0.67
SP140-202ENST00000373645 CHIC1Q5VXU3 224 aa19.01■□□□□ 0.63
SP140-202ENST00000373645 ABCC9O60706 1549 aa17.64■□□□□ 0.41
SP140-202ENST00000373645 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
SP140-202ENST00000373645 CCDC180Q9P1Z9 1646 aa17.33■□□□□ 0.37
SP140-202ENST00000373645 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.32
SP140-202ENST00000373645 DNAJC5BQ9UF47 199 aa16.78■□□□□ 0.28
SP140-202ENST00000373645 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
SP140-202ENST00000373645 NACADO15069 1562 aa16.43■□□□□ 0.22
SP140-202ENST00000373645 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
SP140-202ENST00000373645 DCAF8L2P0C7V8 631 aa16.33■□□□□ 0.2
SP140-202ENST00000373645 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
SP140-202ENST00000373645 FOXD1Q16676 465 aa16.27■□□□□ 0.2
SP140-202ENST00000373645 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.19
SP140-202ENST00000373645 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
SP140-202ENST00000373645 MYO15BQ96JP2 1530 aa16.1■□□□□ 0.17
SP140-202ENST00000373645 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
SP140-202ENST00000373645 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
SP140-202ENST00000373645 CECR2Q9BXF3 1484 aa15.88■□□□□ 0.13
SP140-202ENST00000373645 SCRIBQ14160 1630 aa15.87■□□□□ 0.13
SP140-202ENST00000373645 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
SP140-202ENST00000373645 DCAF1Q9Y4B6 1507 aa15.83■□□□□ 0.12
SP140-202ENST00000373645 EIF4G1Q04637 1599 aaKnown RBP15.8■□□□□ 0.12
SP140-202ENST00000373645 MSH5O43196 834 aa15.53■□□□□ 0.08
SP140-202ENST00000373645 DNAJC5Q9H3Z4 198 aa15.47■□□□□ 0.07
SP140-202ENST00000373645 CUX2O14529 1486 aa15.2■□□□□ 0.02
SP140-202ENST00000373645 NCAPD3P42695 1498 aa15.19■□□□□ 0.02
SP140-202ENST00000373645 ERCC6Q03468 1493 aa15.19■□□□□ 0.02
SP140-202ENST00000373645 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
SP140-202ENST00000373645 PIAS4Q8N2W9 510 aaPredicted RBP15.13■□□□□ 0.01
SP140-202ENST00000373645 NESP48681 1621 aa15.12■□□□□ 0.01
SP140-202ENST00000373645 SMARCA4P51532 1647 aa15.08■□□□□ 0
SP140-202ENST00000373645 HMGXB3Q12766 1538 aa15.07■□□□□ 0
SP140-202ENST00000373645 SMARCA2P51531 1590 aa15.04■□□□□ -0
SP140-202ENST00000373645 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
SP140-202ENST00000373645 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
SP140-202ENST00000373645 BAZ1AQ9NRL2 1556 aaPredicted RBP14.93□□□□□ -0.02
SP140-202ENST00000373645 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
SP140-202ENST00000373645 KIF21AQ7Z4S6 1674 aa14.88□□□□□ -0.03
SP140-202ENST00000373645 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
SP140-202ENST00000373645 LAMC3Q9Y6N6 1575 aa14.86□□□□□ -0.03
SP140-202ENST00000373645 PDS5BQ9NTI5 1447 aa14.76□□□□□ -0.05
SP140-202ENST00000373645 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
SP140-202ENST00000373645 CADPSQ9ULU8 1353 aa14.72□□□□□ -0.05
SP140-202ENST00000373645 MRC2Q9UBG0 1479 aa14.71□□□□□ -0.05
SP140-202ENST00000373645 PPP6R1Q9UPN7 881 aa14.71□□□□□ -0.05
SP140-202ENST00000373645 PLPPR3Q6T4P5 718 aa14.69□□□□□ -0.06
SP140-202ENST00000373645 WDR62O43379 1518 aa14.69□□□□□ -0.06
SP140-202ENST00000373645 WIZO95785 1651 aa14.68□□□□□ -0.06
SP140-202ENST00000373645 ADRA2BP18089 450 aa14.67□□□□□ -0.06
SP140-202ENST00000373645 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
SP140-202ENST00000373645 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
SP140-202ENST00000373645 CFTRP13569 1480 aa14.52□□□□□ -0.08
SP140-202ENST00000373645 URB2Q14146 1524 aaKnown RBP14.51□□□□□ -0.09
SP140-202ENST00000373645 RSF1Q96T23 1441 aaPredicted RBP14.47□□□□□ -0.09
SP140-202ENST00000373645 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
SP140-202ENST00000373645 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
SP140-202ENST00000373645 ZNF608Q9ULD9 1512 aaPredicted RBP14.39□□□□□ -0.11
SP140-202ENST00000373645 RIMBP3CA6NJZ7 1639 aa14.37□□□□□ -0.11
SP140-202ENST00000373645 RIMBP3BA6NNM3 1639 aa14.37□□□□□ -0.11
SP140-202ENST00000373645 RIMBP3Q9UFD9 1639 aa14.37□□□□□ -0.11
SP140-202ENST00000373645 PRDM2Q13029 1718 aa14.33□□□□□ -0.12
SP140-202ENST00000373645 ARHGEF11O15085 1522 aa14.31□□□□□ -0.12
SP140-202ENST00000373645 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
SP140-202ENST00000373645 IFT140Q96RY7 1462 aa14.3□□□□□ -0.12
SP140-202ENST00000373645 TOPBP1Q92547 1522 aa14.29□□□□□ -0.12
SP140-202ENST00000373645 EIF4G3O43432 1585 aaKnown RBP14.27□□□□□ -0.12
SP140-202ENST00000373645 CHD1O14646 1710 aa14.21□□□□□ -0.14
SP140-202ENST00000373645 AQRO60306 1485 aaKnown RBP eCLIP14.2□□□□□ -0.14
SP140-202ENST00000373645 DNMBPQ6XZF7 1577 aa14.2□□□□□ -0.14
SP140-202ENST00000373645 ARAP1Q96P48 1450 aa14.18□□□□□ -0.14
SP140-202ENST00000373645 CYB5RLQ6IPT4 315 aa14.18□□□□□ -0.14
SP140-202ENST00000373645 TARBP1Q13395 1621 aaKnown RBP14.18□□□□□ -0.14
SP140-202ENST00000373645 POLA1P09884 1462 aaPredicted RBP14.14□□□□□ -0.15
SP140-202ENST00000373645 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
SP140-202ENST00000373645 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
SP140-202ENST00000373645 FBLN2P98095 1184 aa14.11□□□□□ -0.15
SP140-202ENST00000373645 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
SP140-202ENST00000373645 TDRD9Q8NDG6 1382 aaKnown RBP14.08□□□□□ -0.16
SP140-202ENST00000373645 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
SP140-202ENST00000373645 CLASP1Q7Z460 1538 aa14.03□□□□□ -0.16
SP140-202ENST00000373645 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.16
SP140-202ENST00000373645 SOGA1O94964 1423 aa14.02□□□□□ -0.16
SP140-202ENST00000373645 CUX1P39880 1505 aa14□□□□□ -0.17
SP140-202ENST00000373645 MAGI1Q96QZ7 1491 aaPredicted RBP13.94□□□□□ -0.18
SP140-202ENST00000373645 SYNJ1O43426 1573 aa13.94□□□□□ -0.18
SP140-202ENST00000373645 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
SP140-202ENST00000373645 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
SP140-202ENST00000373645 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
SP140-202ENST00000373645 SYNJ2O15056 1496 aa13.92□□□□□ -0.18
SP140-202ENST00000373645 PBRM1Q86U86 1689 aa13.88□□□□□ -0.19
SP140-202ENST00000373645 GAPVD1Q14C86 1478 aa13.87□□□□□ -0.19
SP140-202ENST00000373645 ERCC6L2Q5T890 1561 aa13.86□□□□□ -0.19
SP140-202ENST00000373645 ABCA5Q8WWZ7 1642 aa13.84□□□□□ -0.19
SP140-202ENST00000373645 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
SP140-202ENST00000373645 CEP170Q5SW79 1584 aa13.78□□□□□ -0.2
SP140-202ENST00000373645 GRIN2AQ12879 1464 aa13.77□□□□□ -0.21
SP140-202ENST00000373645 ADAMTS12P58397 1594 aa13.76□□□□□ -0.21
SP140-202ENST00000373645 NUP160Q12769 1436 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms