RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 ARHGEF40Q8TER5 1519 aa25.61■■□□□ 1.69
HDAC8-208ENST00000373583 RAPGEF3O95398 923 aa25.59■■□□□ 1.69
HDAC8-208ENST00000373583 KDM4FA0A1W2PPD8 638 aa25.58■■□□□ 1.69
HDAC8-208ENST00000373583 POGZQ7Z3K3 1410 aa25.57■■□□□ 1.68
HDAC8-208ENST00000373583 EHBP1L1Q8N3D4 1523 aa25.57■■□□□ 1.68
HDAC8-208ENST00000373583 VPS8Q8N3P4 1428 aa25.55■■□□□ 1.68
HDAC8-208ENST00000373583 EFCAB2Q5VUJ9 269 aa25.55■■□□□ 1.68
HDAC8-208ENST00000373583 SCAPERQ9BY12 1400 aa25.54■■□□□ 1.68
HDAC8-208ENST00000373583 MAGI2Q86UL8 1455 aa25.53■■□□□ 1.68
HDAC8-208ENST00000373583 ABCC1P33527 1531 aa25.52■■□□□ 1.68
HDAC8-208ENST00000373583 ITSN2Q9NZM3 1697 aa25.52■■□□□ 1.68
HDAC8-208ENST00000373583 MTUS2Q5JR59 1369 aa25.51■■□□□ 1.67
HDAC8-208ENST00000373583 ZFYVE16Q7Z3T8 1539 aa25.51■■□□□ 1.67
HDAC8-208ENST00000373583 KDM5CP41229 1560 aa25.51■■□□□ 1.67
HDAC8-208ENST00000373583 TIAM1Q13009 1591 aa25.5■■□□□ 1.67
HDAC8-208ENST00000373583 ZNF518AQ6AHZ1 1483 aa25.49■■□□□ 1.67
HDAC8-208ENST00000373583 GPATCH8Q9UKJ3 1502 aaKnown RBP25.47■■□□□ 1.67
HDAC8-208ENST00000373583 SAMD9LQ8IVG5 1584 aa25.44■■□□□ 1.66
HDAC8-208ENST00000373583 BCORL1Q5H9F3 1711 aa25.44■■□□□ 1.66
HDAC8-208ENST00000373583 SUPT6HQ7KZ85 1726 aaKnown RBP25.44■■□□□ 1.66
HDAC8-208ENST00000373583 HECW2Q9P2P5 1572 aa25.44■■□□□ 1.66
HDAC8-208ENST00000373583 ADAMTSL3P82987 1691 aa25.43■■□□□ 1.66
HDAC8-208ENST00000373583 MAP3K1Q13233 1512 aa25.42■■□□□ 1.66
HDAC8-208ENST00000373583 YEATS2Q9ULM3 1422 aa25.42■■□□□ 1.66
HDAC8-208ENST00000373583 SIGLEC1Q9BZZ2 1709 aa25.41■■□□□ 1.66
HDAC8-208ENST00000373583 ARHGEF12Q9NZN5 1544 aa25.4■■□□□ 1.66
HDAC8-208ENST00000373583 CCNB3Q8WWL7 1395 aa25.39■■□□□ 1.65
HDAC8-208ENST00000373583 SYCP2Q9BX26 1530 aa25.36■■□□□ 1.65
HDAC8-208ENST00000373583 PLEKHH2Q8IVE3 1493 aa25.35■■□□□ 1.65
HDAC8-208ENST00000373583 MLH3Q9UHC1 1453 aa25.35■■□□□ 1.65
HDAC8-208ENST00000373583 DIP2CQ9Y2E4 1556 aa25.35■■□□□ 1.65
HDAC8-208ENST00000373583 LRRC9Q6ZRR7 1453 aa25.34■■□□□ 1.65
HDAC8-208ENST00000373583 TRAPPC8Q9Y2L5 1435 aa25.34■■□□□ 1.65
HDAC8-208ENST00000373583 REREQ9P2R6 1566 aa25.34■■□□□ 1.65
HDAC8-208ENST00000373583 NCOA2Q15596 1464 aa25.34■■□□□ 1.65
HDAC8-208ENST00000373583 ABCA6Q8N139 1617 aa25.34■■□□□ 1.65
HDAC8-208ENST00000373583 C9orf84Q5VXU9 1444 aa25.33■■□□□ 1.65
HDAC8-208ENST00000373583 ATP10AO60312 1499 aa25.33■■□□□ 1.65
HDAC8-208ENST00000373583 KIAA1107Q9UPP5 1409 aa25.32■■□□□ 1.64
HDAC8-208ENST00000373583 KIDINS220Q9ULH0 1771 aa25.32■■□□□ 1.64
HDAC8-208ENST00000373583 MADDQ8WXG6 1647 aa25.32■■□□□ 1.64
HDAC8-208ENST00000373583 AFAP1Q8N556 730 aa25.3■■□□□ 1.64
HDAC8-208ENST00000373583 CFDP1Q9UEE9 299 aaPredicted RBP25.29■■□□□ 1.64
HDAC8-208ENST00000373583 INO80Q9ULG1 1556 aaPredicted RBP25.27■■□□□ 1.64
HDAC8-208ENST00000373583 ARID4BQ4LE39 1312 aaPredicted RBP25.26■■□□□ 1.63
HDAC8-208ENST00000373583 ZNF777Q9ULD5 760 aaPredicted RBP25.25■■□□□ 1.63
HDAC8-208ENST00000373583 RIMS1Q86UR5 1692 aaKnown RBP25.25■■□□□ 1.63
HDAC8-208ENST00000373583 FER1L4A9Z1Z3 1794 aa25.25■■□□□ 1.63
HDAC8-208ENST00000373583 PTPRMP28827 1452 aa25.23■■□□□ 1.63
HDAC8-208ENST00000373583 ATP7AQ04656 1500 aa25.22■■□□□ 1.63
HDAC8-208ENST00000373583 AGLP35573 1532 aa25.2■■□□□ 1.62
HDAC8-208ENST00000373583 CAMSAP2Q08AD1 1489 aa25.2■■□□□ 1.62
HDAC8-208ENST00000373583 MBD5Q9P267 1494 aa25.2■■□□□ 1.62
HDAC8-208ENST00000373583 HNRNPMP52272 730 aaKnown RBP eCLIP25.16■■□□□ 1.62
HDAC8-208ENST00000373583 KANK4Q5T7N3 995 aaPredicted RBP25.16■■□□□ 1.62
HDAC8-208ENST00000373583 ADGBQ8N7X0 1667 aa25.16■■□□□ 1.62
HDAC8-208ENST00000373583 ARHGEF5Q12774 1597 aa25.15■■□□□ 1.62
HDAC8-208ENST00000373583 MYT1LQ9UL68 1186 aa25.15■■□□□ 1.62
HDAC8-208ENST00000373583 SPAG9O60271 1321 aaKnown RBP25.14■■□□□ 1.62
HDAC8-208ENST00000373583 ZNF644Q9H582 1327 aaPredicted RBP25.14■■□□□ 1.62
HDAC8-208ENST00000373583 PLXNC1O60486 1568 aa25.14■■□□□ 1.61
HDAC8-208ENST00000373583 CCDC141Q6ZP82 1450 aa25.12■■□□□ 1.61
HDAC8-208ENST00000373583 MYOM3Q5VTT5 1437 aa25.12■■□□□ 1.61
HDAC8-208ENST00000373583 MIA2Q96PC5 1412 aa25.11■■□□□ 1.61
HDAC8-208ENST00000373583 APLP2Q06481 763 aa25.1■■□□□ 1.61
HDAC8-208ENST00000373583 RTEL1-TNFRSF6BF6WH68 1400 aa25.1■■□□□ 1.61
HDAC8-208ENST00000373583 A2MP01023 1474 aa25.05■■□□□ 1.6
HDAC8-208ENST00000373583 MLECQ14165 292 aa25.04■■□□□ 1.6
HDAC8-208ENST00000373583 RSPH4AQ5TD94 716 aa25.04■■□□□ 1.6
HDAC8-208ENST00000373583 MAST1Q9Y2H9 1570 aa25.04■■□□□ 1.6
HDAC8-208ENST00000373583 PTPN23Q9H3S7 1636 aa25.01■■□□□ 1.59
HDAC8-208ENST00000373583 MROH2AA6NES4 1674 aa25.01■■□□□ 1.59
HDAC8-208ENST00000373583 CROCC2H7BZ55 1655 aa25.01■■□□□ 1.59
HDAC8-208ENST00000373583 C3P01024 1663 aa24.99■■□□□ 1.59
HDAC8-208ENST00000373583 LMTK3Q96Q04 1460 aa24.96■■□□□ 1.59
HDAC8-208ENST00000373583 CNTLNQ9NXG0 1405 aa24.95■■□□□ 1.59
HDAC8-208ENST00000373583 PREX1Q8TCU6 1659 aa24.95■■□□□ 1.58
HDAC8-208ENST00000373583 TCOF1Q13428 1488 aaKnown RBP24.95■■□□□ 1.58
HDAC8-208ENST00000373583 FGD6Q6ZV73 1430 aa24.95■■□□□ 1.58
HDAC8-208ENST00000373583 DNMT1P26358 1616 aaKnown RBP24.93■■□□□ 1.58
HDAC8-208ENST00000373583 SHANK2Q9UPX8 1470 aa24.92■■□□□ 1.58
HDAC8-208ENST00000373583 DHX29Q7Z478 1369 aaKnown RBP24.92■■□□□ 1.58
HDAC8-208ENST00000373583 CLTCQ00610 1675 aaKnown RBP24.91■■□□□ 1.58
HDAC8-208ENST00000373583 SETD1BQ9UPS6 1966 aaKnown RBP24.9■■□□□ 1.58
HDAC8-208ENST00000373583 FAM135AQ9P2D6 1515 aa24.89■■□□□ 1.57
HDAC8-208ENST00000373583 EIF2AK4Q9P2K8 1649 aaKnown RBP24.88■■□□□ 1.57
HDAC8-208ENST00000373583 TSPY4P0CV99 314 aa24.88■■□□□ 1.57
HDAC8-208ENST00000373583 TSPY10P0CW01 314 aa24.88■■□□□ 1.57
HDAC8-208ENST00000373583 ESF1Q9H501 851 aaKnown RBP24.85■■□□□ 1.57
HDAC8-208ENST00000373583 RNF17Q9BXT8 1623 aaKnown RBP24.85■■□□□ 1.57
HDAC8-208ENST00000373583 ABCC5O15440 1437 aa24.83■■□□□ 1.57
HDAC8-208ENST00000373583 DAPK1P53355 1430 aa24.83■■□□□ 1.57
HDAC8-208ENST00000373583 PPP6R1Q9UPN7 881 aa24.82■■□□□ 1.56
HDAC8-208ENST00000373583 PLPPR3Q6T4P5 718 aa24.81■■□□□ 1.56
HDAC8-208ENST00000373583 CEBPAP49715 358 aaPredicted RBP24.8■■□□□ 1.56
HDAC8-208ENST00000373583 KDM5DQ9BY66 1539 aa24.8■■□□□ 1.56
HDAC8-208ENST00000373583 DUOX2Q9NRD8 1548 aa24.8■■□□□ 1.56
HDAC8-208ENST00000373583 NPATQ14207 1427 aa24.79■■□□□ 1.56
HDAC8-208ENST00000373583 ZC3H13Q5T200 1668 aaKnown RBP24.78■■□□□ 1.56
HDAC8-208ENST00000373583 GGT6Q6P531 493 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms