RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ABCC5O15440 1437 aa26.79■■□□□ 1.88
USP49-202ENST00000373010 KIF14Q15058 1648 aa26.76■■□□□ 1.87
USP49-202ENST00000373010 DDX10Q13206 875 aaKnown RBP26.75■■□□□ 1.87
USP49-202ENST00000373010 ROCK1Q13464 1354 aa26.74■■□□□ 1.87
USP49-202ENST00000373010 KDM5BQ9UGL1 1544 aa26.73■■□□□ 1.87
USP49-202ENST00000373010 ADCY10Q96PN6 1610 aa26.72■■□□□ 1.87
USP49-202ENST00000373010 MPHOSPH9Q99550 1183 aa26.71■■□□□ 1.87
USP49-202ENST00000373010 ITSN2Q9NZM3 1697 aa26.71■■□□□ 1.87
USP49-202ENST00000373010 CFDP1Q9UEE9 299 aaPredicted RBP26.7■■□□□ 1.87
USP49-202ENST00000373010 ABCA8O94911 1581 aa26.7■■□□□ 1.87
USP49-202ENST00000373010 GPATCH8Q9UKJ3 1502 aaKnown RBP26.7■■□□□ 1.86
USP49-202ENST00000373010 CAMSAP2Q08AD1 1489 aa26.7■■□□□ 1.86
USP49-202ENST00000373010 FOXD1Q16676 465 aa26.66■■□□□ 1.86
USP49-202ENST00000373010 ZNF777Q9ULD5 760 aaPredicted RBP26.65■■□□□ 1.86
USP49-202ENST00000373010 ATP10BO94823 1461 aa26.64■■□□□ 1.85
USP49-202ENST00000373010 KCNH8Q96L42 1107 aa26.63■■□□□ 1.85
USP49-202ENST00000373010 PLEKHD1A6NEE1 506 aa26.61■■□□□ 1.85
USP49-202ENST00000373010 CHD1O14646 1710 aa26.6■■□□□ 1.85
USP49-202ENST00000373010 ADGBQ8N7X0 1667 aa26.57■■□□□ 1.84
USP49-202ENST00000373010 CDC42BPAQ5VT25 1732 aa26.57■■□□□ 1.84
USP49-202ENST00000373010 CROCC2H7BZ55 1655 aa26.56■■□□□ 1.84
USP49-202ENST00000373010 NCOA1Q15788 1441 aa26.55■■□□□ 1.84
USP49-202ENST00000373010 ABCC10Q5T3U5 1492 aa26.55■■□□□ 1.84
USP49-202ENST00000373010 PTPRGP23470 1445 aa26.55■■□□□ 1.84
USP49-202ENST00000373010 ANKRD30BQ9BXX2 1392 aa26.53■■□□□ 1.84
USP49-202ENST00000373010 SLC4A1APQ9BWU0 796 aaKnown RBP26.53■■□□□ 1.84
USP49-202ENST00000373010 L3MBTL2Q969R5 705 aa26.51■■□□□ 1.83
USP49-202ENST00000373010 ADGRL2O95490 1459 aa26.5■■□□□ 1.83
USP49-202ENST00000373010 PZPP20742 1482 aa26.47■■□□□ 1.83
USP49-202ENST00000373010 RPRD2Q5VT52 1461 aaKnown RBP26.46■■□□□ 1.83
USP49-202ENST00000373010 ANKRD30AQ9BXX3 1397 aa26.45■■□□□ 1.83
USP49-202ENST00000373010 HSPA5P11021 654 aaKnown RBP26.44■■□□□ 1.82
USP49-202ENST00000373010 SHROOM2Q13796 1616 aa26.42■■□□□ 1.82
USP49-202ENST00000373010 ANP32CO43423 234 aa26.41■■□□□ 1.82
USP49-202ENST00000373010 TEX14Q8IWB6 1497 aa26.41■■□□□ 1.82
USP49-202ENST00000373010 C9orf84Q5VXU9 1444 aa26.39■■□□□ 1.81
USP49-202ENST00000373010 ANKRD50Q9ULJ7 1429 aa26.38■■□□□ 1.81
USP49-202ENST00000373010 ERCC6L2Q5T890 1561 aa26.38■■□□□ 1.81
USP49-202ENST00000373010 SHANK2Q9UPX8 1470 aa26.37■■□□□ 1.81
USP49-202ENST00000373010 EIF4G2P78344 907 aaKnown RBP eCLIP26.36■■□□□ 1.81
USP49-202ENST00000373010 NBPF8Q3BBV2 869 aa26.36■■□□□ 1.81
USP49-202ENST00000373010 HNRNPMP52272 730 aaKnown RBP eCLIP26.36■■□□□ 1.81
USP49-202ENST00000373010 CDC42BPBQ9Y5S2 1711 aa26.34■■□□□ 1.81
USP49-202ENST00000373010 CCER2I3L3R5 266 aa26.34■■□□□ 1.81
USP49-202ENST00000373010 WASHC2AQ641Q2 1341 aa26.33■■□□□ 1.81
USP49-202ENST00000373010 KIAA1107Q9UPP5 1409 aa26.33■■□□□ 1.81
USP49-202ENST00000373010 TSPY4P0CV99 314 aa26.32■■□□□ 1.8
USP49-202ENST00000373010 TSPY10P0CW01 314 aa26.32■■□□□ 1.8
USP49-202ENST00000373010 PKD2Q13563 968 aa26.32■■□□□ 1.8
USP49-202ENST00000373010 PREX2Q70Z35 1606 aa26.31■■□□□ 1.8
USP49-202ENST00000373010 SAMD9LQ8IVG5 1584 aa26.3■■□□□ 1.8
USP49-202ENST00000373010 ARHGEF5Q12774 1597 aa26.3■■□□□ 1.8
USP49-202ENST00000373010 MBD5Q9P267 1494 aa26.3■■□□□ 1.8
USP49-202ENST00000373010 NUP155O75694 1391 aa26.26■■□□□ 1.79
USP49-202ENST00000373010 KIF15Q9NS87 1388 aa26.25■■□□□ 1.79
USP49-202ENST00000373010 TTC37Q6PGP7 1564 aa26.25■■□□□ 1.79
USP49-202ENST00000373010 ABCC2Q92887 1545 aa26.25■■□□□ 1.79
USP49-202ENST00000373010 CCDC141Q6ZP82 1450 aa26.23■■□□□ 1.79
USP49-202ENST00000373010 C11orf95C9JLR9 678 aaPredicted RBP26.23■■□□□ 1.79
USP49-202ENST00000373010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.22■■□□□ 1.79
USP49-202ENST00000373010 PELP1Q8IZL8 1130 aaKnown RBP26.22■■□□□ 1.79
USP49-202ENST00000373010 ARHGAP5Q13017 1502 aa26.19■■□□□ 1.78
USP49-202ENST00000373010 KDM5DQ9BY66 1539 aa26.19■■□□□ 1.78
USP49-202ENST00000373010 CLASP1Q7Z460 1538 aa26.18■■□□□ 1.78
USP49-202ENST00000373010 SYCP2Q9BX26 1530 aa26.18■■□□□ 1.78
USP49-202ENST00000373010 SUPT16HQ9Y5B9 1047 aaKnown RBP26.17■■□□□ 1.78
USP49-202ENST00000373010 CCDC7Q96M83 1385 aa26.17■■□□□ 1.78
USP49-202ENST00000373010 SPATA31E1Q6ZUB1 1445 aa26.16■■□□□ 1.78
USP49-202ENST00000373010 CNTLNQ9NXG0 1405 aa26.15■■□□□ 1.78
USP49-202ENST00000373010 MYO5CQ9NQX4 1742 aa26.14■■□□□ 1.78
USP49-202ENST00000373010 ZNF326Q5BKZ1 582 aaKnown RBP26.14■■□□□ 1.77
USP49-202ENST00000373010 RSPH4AQ5TD94 716 aa26.13■■□□□ 1.77
USP49-202ENST00000373010 ZCCHC11Q5TAX3 1644 aaKnown RBP26.11■■□□□ 1.77
USP49-202ENST00000373010 POLR1AO95602 1720 aaPredicted RBP26.08■■□□□ 1.76
USP49-202ENST00000373010 MAST1Q9Y2H9 1570 aa26.07■■□□□ 1.76
USP49-202ENST00000373010 KIF7Q2M1P5 1343 aa26.07■■□□□ 1.76
USP49-202ENST00000373010 FAM135AQ9P2D6 1515 aa26.06■■□□□ 1.76
USP49-202ENST00000373010 UHRF1BP1LA0JNW5 1464 aa26.04■■□□□ 1.76
USP49-202ENST00000373010 ARHGEF12Q9NZN5 1544 aa26.03■■□□□ 1.76
USP49-202ENST00000373010 USP47Q96K76 1375 aa26.02■■□□□ 1.76
USP49-202ENST00000373010 PLEKHH2Q8IVE3 1493 aa26.02■■□□□ 1.76
USP49-202ENST00000373010 UHRF1BP1Q6BDS2 1440 aa26.01■■□□□ 1.75
USP49-202ENST00000373010 PLCH2O75038 1416 aa26■■□□□ 1.75
USP49-202ENST00000373010 BCORL1Q5H9F3 1711 aa25.99■■□□□ 1.75
USP49-202ENST00000373010 PLXNC1O60486 1568 aa25.99■■□□□ 1.75
USP49-202ENST00000373010 UNC13BO14795 1591 aa25.98■■□□□ 1.75
USP49-202ENST00000373010 KDM5CP41229 1560 aa25.98■■□□□ 1.75
USP49-202ENST00000373010 KDM2AQ9Y2K7 1162 aa25.98■■□□□ 1.75
USP49-202ENST00000373010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.98■■□□□ 1.75
USP49-202ENST00000373010 CCDC184Q52MB2 194 aa25.97■■□□□ 1.75
USP49-202ENST00000373010 RALGAPBQ86X10 1494 aa25.96■■□□□ 1.75
USP49-202ENST00000373010 PRKRIP1Q9H875 184 aaPredicted RBP25.96■■□□□ 1.75
USP49-202ENST00000373010 EFCAB2Q5VUJ9 269 aa25.94■■□□□ 1.74
USP49-202ENST00000373010 DCAF11Q8TEB1 546 aa25.94■■□□□ 1.74
USP49-202ENST00000373010 HNRNPUQ00839 825 aaKnown RBP eCLIP25.92■■□□□ 1.74
USP49-202ENST00000373010 ABCC1P33527 1531 aa25.91■■□□□ 1.74
USP49-202ENST00000373010 DUOX2Q9NRD8 1548 aa25.91■■□□□ 1.74
USP49-202ENST00000373010 POLR3GLQ9BT43 218 aa25.9■■□□□ 1.74
USP49-202ENST00000373010 CARD11Q9BXL7 1154 aa25.9■■□□□ 1.74
USP49-202ENST00000373010 IQGAP3Q86VI3 1631 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms