RNA–Protein interactions for RNA: ENST00000371608.6

BCAS4-202, Transcript of breast carcinoma amplified sequence 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BCAS4, Length 6,680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-202ENST00000371608 LTV1Q96GA3 475 aaPredicted RBP16.69■□□□□ 0.26
BCAS4-202ENST00000371608 CADPSQ9ULU8 1353 aa16.68■□□□□ 0.26
BCAS4-202ENST00000371608 FAM69CQ0P6D2 419 aa16.68■□□□□ 0.26
BCAS4-202ENST00000371608 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
BCAS4-202ENST00000371608 MEX3CQ5U5Q3 659 aaKnown RBP16.67■□□□□ 0.26
BCAS4-202ENST00000371608 NUP155O75694 1391 aa16.67■□□□□ 0.26
BCAS4-202ENST00000371608 CASC1Q6TDU7 716 aa16.67■□□□□ 0.26
BCAS4-202ENST00000371608 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
BCAS4-202ENST00000371608 PHF23Q9BUL5 403 aaPredicted RBP16.65■□□□□ 0.26
BCAS4-202ENST00000371608 TMX4Q9H1E5 349 aaPredicted RBP16.64■□□□□ 0.25
BCAS4-202ENST00000371608 FGD1P98174 961 aa16.64■□□□□ 0.25
BCAS4-202ENST00000371608 KANK4Q5T7N3 995 aaPredicted RBP16.64■□□□□ 0.25
BCAS4-202ENST00000371608 NBR1Q14596 966 aa16.63■□□□□ 0.25
BCAS4-202ENST00000371608 KCNJ4P48050 445 aa16.63■□□□□ 0.25
BCAS4-202ENST00000371608 MSH5O43196 834 aa16.62■□□□□ 0.25
BCAS4-202ENST00000371608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.61■□□□□ 0.25
BCAS4-202ENST00000371608 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.6■□□□□ 0.25
BCAS4-202ENST00000371608 APBB1O00213 710 aa16.59■□□□□ 0.25
BCAS4-202ENST00000371608 NCLP19338 710 aaKnown RBP16.59■□□□□ 0.25
BCAS4-202ENST00000371608 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
BCAS4-202ENST00000371608 FHOD3Q2V2M9 1422 aa16.59■□□□□ 0.25
BCAS4-202ENST00000371608 EVA1CP58658 441 aa16.59■□□□□ 0.25
BCAS4-202ENST00000371608 ANKRD30AQ9BXX3 1397 aa16.58■□□□□ 0.25
BCAS4-202ENST00000371608 ROCK2O75116 1388 aaKnown RBP16.58■□□□□ 0.24
BCAS4-202ENST00000371608 WIZO95785 1651 aa16.57■□□□□ 0.24
BCAS4-202ENST00000371608 G3V3G9 751 aa16.57■□□□□ 0.24
BCAS4-202ENST00000371608 RGS3P49796 1198 aa16.57■□□□□ 0.24
BCAS4-202ENST00000371608 DCAF8Q5TAQ9 597 aa16.57■□□□□ 0.24
BCAS4-202ENST00000371608 AMPHP49418 695 aa16.56■□□□□ 0.24
BCAS4-202ENST00000371608 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
BCAS4-202ENST00000371608 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
BCAS4-202ENST00000371608 CHMP3Q9Y3E7 222 aa16.56■□□□□ 0.24
BCAS4-202ENST00000371608 CLSTN1O94985 981 aa16.56■□□□□ 0.24
BCAS4-202ENST00000371608 TRAK1Q9UPV9 953 aa16.56■□□□□ 0.24
BCAS4-202ENST00000371608 ZRSR1Q15695 479 aaKnown RBP16.55■□□□□ 0.24
BCAS4-202ENST00000371608 PTPRGP23470 1445 aa16.55■□□□□ 0.24
BCAS4-202ENST00000371608 FANCD2Q9BXW9 1451 aa16.55■□□□□ 0.24
BCAS4-202ENST00000371608 FMN1Q68DA7 1419 aa16.55■□□□□ 0.24
BCAS4-202ENST00000371608 MPHOSPH9Q99550 1183 aa16.54■□□□□ 0.24
BCAS4-202ENST00000371608 KLHL34Q8N239 644 aa16.53■□□□□ 0.24
BCAS4-202ENST00000371608 SUPT16HQ9Y5B9 1047 aaKnown RBP16.52■□□□□ 0.24
BCAS4-202ENST00000371608 GTF2E1P29083 439 aaPredicted RBP16.51■□□□□ 0.23
BCAS4-202ENST00000371608 HSPA5P11021 654 aaKnown RBP16.5■□□□□ 0.23
BCAS4-202ENST00000371608 BECN1Q14457 450 aa16.49■□□□□ 0.23
BCAS4-202ENST00000371608 TAF7LQ5H9L4 462 aa16.49■□□□□ 0.23
BCAS4-202ENST00000371608 SETD5Q9C0A6 1442 aa16.48■□□□□ 0.23
BCAS4-202ENST00000371608 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
BCAS4-202ENST00000371608 TERF2IPQ9NYB0 399 aa16.48■□□□□ 0.23
BCAS4-202ENST00000371608 RAPGEF2Q9Y4G8 1499 aa16.47■□□□□ 0.23
BCAS4-202ENST00000371608 SYTL4Q96C24 671 aaPredicted RBP16.47■□□□□ 0.23
BCAS4-202ENST00000371608 CHMP4BQ9H444 224 aaKnown RBP16.46■□□□□ 0.23
BCAS4-202ENST00000371608 GORABQ5T7V8 394 aa16.44■□□□□ 0.22
BCAS4-202ENST00000371608 CCDC18Q5T9S5 1454 aa16.44■□□□□ 0.22
BCAS4-202ENST00000371608 MS4A1P11836 297 aa16.43■□□□□ 0.22
BCAS4-202ENST00000371608 TOP2AP11388 1531 aaKnown RBP16.43■□□□□ 0.22
BCAS4-202ENST00000371608 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
BCAS4-202ENST00000371608 EIF3AQ14152 1382 aaKnown RBP16.42■□□□□ 0.22
BCAS4-202ENST00000371608 GOLGA6L22H0YM25 854 aa16.42■□□□□ 0.22
BCAS4-202ENST00000371608 MINK1Q8N4C8 1332 aaPredicted RBP16.41■□□□□ 0.22
BCAS4-202ENST00000371608 KTN1Q86UP2 1357 aaKnown RBP16.41■□□□□ 0.22
BCAS4-202ENST00000371608 VPS8Q8N3P4 1428 aa16.41■□□□□ 0.22
BCAS4-202ENST00000371608 FRAT2O75474 233 aaPredicted RBP16.4■□□□□ 0.22
BCAS4-202ENST00000371608 PSME1Q06323 249 aa16.4■□□□□ 0.22
BCAS4-202ENST00000371608 RSPH4AQ5TD94 716 aa16.4■□□□□ 0.22
BCAS4-202ENST00000371608 SLC4A10Q6U841 1118 aa16.4■□□□□ 0.22
BCAS4-202ENST00000371608 STK31Q9BXU1 1019 aa16.4■□□□□ 0.22
BCAS4-202ENST00000371608 NGEFQ8N5V2 710 aa16.38■□□□□ 0.21
BCAS4-202ENST00000371608 CCDC146Q8IYE0 955 aa16.38■□□□□ 0.21
BCAS4-202ENST00000371608 EIF5BO60841 1220 aaKnown RBP16.38■□□□□ 0.21
BCAS4-202ENST00000371608 ATF3P18847 181 aa16.38■□□□□ 0.21
BCAS4-202ENST00000371608 PLCB2Q00722 1185 aa16.37■□□□□ 0.21
BCAS4-202ENST00000371608 AQRO60306 1485 aaKnown RBP eCLIP16.36■□□□□ 0.21
BCAS4-202ENST00000371608 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
BCAS4-202ENST00000371608 B4GALNT3Q6L9W6 998 aa16.36■□□□□ 0.21
BCAS4-202ENST00000371608 ITPRIPQ8IWB1 547 aa16.36■□□□□ 0.21
BCAS4-202ENST00000371608 HSP90AB1P08238 724 aaKnown RBP16.35■□□□□ 0.21
BCAS4-202ENST00000371608 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
BCAS4-202ENST00000371608 RAB3GAP2Q9H2M9 1393 aa16.34■□□□□ 0.21
BCAS4-202ENST00000371608 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
BCAS4-202ENST00000371608 C1orf141Q5JVX7 400 aa16.34■□□□□ 0.21
BCAS4-202ENST00000371608 VGFO15240 615 aaPredicted RBP16.34■□□□□ 0.21
BCAS4-202ENST00000371608 GNL2Q13823 731 aaKnown RBP16.33■□□□□ 0.21
BCAS4-202ENST00000371608 NUTM2GQ5VZR2 741 aa16.32■□□□□ 0.2
BCAS4-202ENST00000371608 COG3Q96JB2 828 aa16.32■□□□□ 0.2
BCAS4-202ENST00000371608 SMARCA4P51532 1647 aa16.32■□□□□ 0.2
BCAS4-202ENST00000371608 GAPVD1Q14C86 1478 aa16.32■□□□□ 0.2
BCAS4-202ENST00000371608 L3MBTL2Q969R5 705 aa16.31■□□□□ 0.2
BCAS4-202ENST00000371608 IPO8O15397 1037 aaKnown RBP16.31■□□□□ 0.2
BCAS4-202ENST00000371608 PTMAP06454 111 aaKnown RBP16.31■□□□□ 0.2
BCAS4-202ENST00000371608 SPRYD3Q8NCJ5 442 aa16.3■□□□□ 0.2
BCAS4-202ENST00000371608 PIP4K2BP78356 416 aa16.3■□□□□ 0.2
BCAS4-202ENST00000371608 USP35Q9P2H5 1018 aa16.3■□□□□ 0.2
BCAS4-202ENST00000371608 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
BCAS4-202ENST00000371608 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
BCAS4-202ENST00000371608 KIAA1211Q6ZU35 1233 aa16.28■□□□□ 0.2
BCAS4-202ENST00000371608 NUTM2BA6NNL0 878 aaPredicted RBP16.28■□□□□ 0.2
BCAS4-202ENST00000371608 NUTM2EB1AL46 878 aaPredicted RBP16.28■□□□□ 0.2
BCAS4-202ENST00000371608 NUTM2AQ8IVF1 878 aaPredicted RBP16.28■□□□□ 0.2
BCAS4-202ENST00000371608 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
BCAS4-202ENST00000371608 MCCP23508 829 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms