RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 POGZQ7Z3K3 1410 aa27.58■■■□□ 2.01
LRRC42-202ENST00000371368 ADAMTSL3P82987 1691 aa27.58■■■□□ 2.01
LRRC42-202ENST00000371368 MAGI2Q86UL8 1455 aa27.57■■■□□ 2
LRRC42-202ENST00000371368 ARHGAP5Q13017 1502 aa27.57■■■□□ 2
LRRC42-202ENST00000371368 YEATS2Q9ULM3 1422 aa27.57■■■□□ 2
LRRC42-202ENST00000371368 ZFYVE16Q7Z3T8 1539 aa27.56■■■□□ 2
LRRC42-202ENST00000371368 BCORL1Q5H9F3 1711 aa27.54■■■□□ 2
LRRC42-202ENST00000371368 CDC42BPBQ9Y5S2 1711 aa27.51■■□□□ 1.99
LRRC42-202ENST00000371368 PTPRMP28827 1452 aa27.5■■□□□ 1.99
LRRC42-202ENST00000371368 AFAP1Q8N556 730 aa27.49■■□□□ 1.99
LRRC42-202ENST00000371368 CEP162Q5TB80 1403 aa27.49■■□□□ 1.99
LRRC42-202ENST00000371368 HECW2Q9P2P5 1572 aa27.48■■□□□ 1.99
LRRC42-202ENST00000371368 PREX2Q70Z35 1606 aa27.48■■□□□ 1.99
LRRC42-202ENST00000371368 ZNF518AQ6AHZ1 1483 aa27.47■■□□□ 1.99
LRRC42-202ENST00000371368 MADDQ8WXG6 1647 aa27.46■■□□□ 1.99
LRRC42-202ENST00000371368 ATP10AO60312 1499 aa27.45■■□□□ 1.99
LRRC42-202ENST00000371368 LOC105371045A0A1W2PR82 267 aa27.43■■□□□ 1.98
LRRC42-202ENST00000371368 SIGLEC1Q9BZZ2 1709 aa27.43■■□□□ 1.98
LRRC42-202ENST00000371368 CDC42BPAQ5VT25 1732 aa27.42■■□□□ 1.98
LRRC42-202ENST00000371368 KDM5CP41229 1560 aa27.41■■□□□ 1.98
LRRC42-202ENST00000371368 MYT1LQ9UL68 1186 aa27.41■■□□□ 1.98
LRRC42-202ENST00000371368 MLECQ14165 292 aa27.4■■□□□ 1.98
LRRC42-202ENST00000371368 ARHGEF12Q9NZN5 1544 aa27.4■■□□□ 1.98
LRRC42-202ENST00000371368 MTUS2Q5JR59 1369 aa27.38■■□□□ 1.97
LRRC42-202ENST00000371368 ABCC1P33527 1531 aa27.38■■□□□ 1.97
LRRC42-202ENST00000371368 GPATCH8Q9UKJ3 1502 aaKnown RBP27.38■■□□□ 1.97
LRRC42-202ENST00000371368 ZNF777Q9ULD5 760 aaPredicted RBP27.38■■□□□ 1.97
LRRC42-202ENST00000371368 C9orf84Q5VXU9 1444 aa27.38■■□□□ 1.97
LRRC42-202ENST00000371368 TRAPPC8Q9Y2L5 1435 aa27.38■■□□□ 1.97
LRRC42-202ENST00000371368 RIMS1Q86UR5 1692 aaKnown RBP27.37■■□□□ 1.97
LRRC42-202ENST00000371368 ITSN2Q9NZM3 1697 aa27.34■■□□□ 1.97
LRRC42-202ENST00000371368 MLH3Q9UHC1 1453 aa27.34■■□□□ 1.97
LRRC42-202ENST00000371368 CCNB3Q8WWL7 1395 aa27.33■■□□□ 1.97
LRRC42-202ENST00000371368 CFDP1Q9UEE9 299 aaPredicted RBP27.31■■□□□ 1.96
LRRC42-202ENST00000371368 PLPPR3Q6T4P5 718 aa27.3■■□□□ 1.96
LRRC42-202ENST00000371368 SAMD9LQ8IVG5 1584 aa27.3■■□□□ 1.96
LRRC42-202ENST00000371368 DIP2CQ9Y2E4 1556 aa27.3■■□□□ 1.96
LRRC42-202ENST00000371368 HNRNPMP52272 730 aaKnown RBP eCLIP27.29■■□□□ 1.96
LRRC42-202ENST00000371368 ABCA6Q8N139 1617 aa27.26■■□□□ 1.95
LRRC42-202ENST00000371368 EHBP1L1Q8N3D4 1523 aa27.26■■□□□ 1.95
LRRC42-202ENST00000371368 FER1L4A9Z1Z3 1794 aa27.25■■□□□ 1.95
LRRC42-202ENST00000371368 REREQ9P2R6 1566 aa27.24■■□□□ 1.95
LRRC42-202ENST00000371368 SYCP2Q9BX26 1530 aa27.24■■□□□ 1.95
LRRC42-202ENST00000371368 KIAA1107Q9UPP5 1409 aa27.23■■□□□ 1.95
LRRC42-202ENST00000371368 KIDINS220Q9ULH0 1771 aa27.22■■□□□ 1.95
LRRC42-202ENST00000371368 PLEKHH2Q8IVE3 1493 aa27.22■■□□□ 1.95
LRRC42-202ENST00000371368 SPAG9O60271 1321 aaKnown RBP27.2■■□□□ 1.95
LRRC42-202ENST00000371368 TIAM1Q13009 1591 aa27.19■■□□□ 1.94
LRRC42-202ENST00000371368 VPS8Q8N3P4 1428 aa27.18■■□□□ 1.94
LRRC42-202ENST00000371368 LMTK3Q96Q04 1460 aa27.18■■□□□ 1.94
LRRC42-202ENST00000371368 ZNF644Q9H582 1327 aaPredicted RBP27.17■■□□□ 1.94
LRRC42-202ENST00000371368 AGLP35573 1532 aa27.17■■□□□ 1.94
LRRC42-202ENST00000371368 CEBPAP49715 358 aaPredicted RBP27.15■■□□□ 1.94
LRRC42-202ENST00000371368 NCOA2Q15596 1464 aa27.13■■□□□ 1.93
LRRC42-202ENST00000371368 SUPT6HQ7KZ85 1726 aaKnown RBP27.11■■□□□ 1.93
LRRC42-202ENST00000371368 HSPA2P54652 639 aa27.1■■□□□ 1.93
LRRC42-202ENST00000371368 ATP7AQ04656 1500 aa27.1■■□□□ 1.93
LRRC42-202ENST00000371368 ESF1Q9H501 851 aaKnown RBP27.09■■□□□ 1.93
LRRC42-202ENST00000371368 MBD5Q9P267 1494 aa27.08■■□□□ 1.93
LRRC42-202ENST00000371368 INO80Q9ULG1 1556 aaPredicted RBP27.07■■□□□ 1.92
LRRC42-202ENST00000371368 LRRC9Q6ZRR7 1453 aa27.06■■□□□ 1.92
LRRC42-202ENST00000371368 A2MP01023 1474 aa27.03■■□□□ 1.92
LRRC42-202ENST00000371368 KANK4Q5T7N3 995 aaPredicted RBP27.02■■□□□ 1.92
LRRC42-202ENST00000371368 ILDR1Q86SU0 546 aaPredicted RBP27.02■■□□□ 1.92
LRRC42-202ENST00000371368 MAP3K1Q13233 1512 aa27.01■■□□□ 1.91
LRRC42-202ENST00000371368 RTEL1-TNFRSF6BF6WH68 1400 aa26.99■■□□□ 1.91
LRRC42-202ENST00000371368 PREX1Q8TCU6 1659 aa26.99■■□□□ 1.91
LRRC42-202ENST00000371368 RSPH4AQ5TD94 716 aa26.99■■□□□ 1.91
LRRC42-202ENST00000371368 CAMSAP2Q08AD1 1489 aa26.99■■□□□ 1.91
LRRC42-202ENST00000371368 CNTLNQ9NXG0 1405 aa26.99■■□□□ 1.91
LRRC42-202ENST00000371368 C3P01024 1663 aa26.98■■□□□ 1.91
LRRC42-202ENST00000371368 PLXNC1O60486 1568 aa26.98■■□□□ 1.91
LRRC42-202ENST00000371368 ADGBQ8N7X0 1667 aa26.95■■□□□ 1.91
LRRC42-202ENST00000371368 CCDC141Q6ZP82 1450 aa26.94■■□□□ 1.9
LRRC42-202ENST00000371368 GGT6Q6P531 493 aa26.94■■□□□ 1.9
LRRC42-202ENST00000371368 SETD1BQ9UPS6 1966 aaKnown RBP26.94■■□□□ 1.9
LRRC42-202ENST00000371368 UHRF1BP1Q6BDS2 1440 aa26.93■■□□□ 1.9
LRRC42-202ENST00000371368 APLP2Q06481 763 aa26.91■■□□□ 1.9
LRRC42-202ENST00000371368 ZMYM3Q14202 1370 aa26.91■■□□□ 1.9
LRRC42-202ENST00000371368 DHX29Q7Z478 1369 aaKnown RBP26.91■■□□□ 1.9
LRRC42-202ENST00000371368 TSPY4P0CV99 314 aa26.89■■□□□ 1.9
LRRC42-202ENST00000371368 TSPY10P0CW01 314 aa26.89■■□□□ 1.9
LRRC42-202ENST00000371368 MROH2AA6NES4 1674 aa26.89■■□□□ 1.89
LRRC42-202ENST00000371368 ARHGEF5Q12774 1597 aa26.88■■□□□ 1.89
LRRC42-202ENST00000371368 PPP6R1Q9UPN7 881 aa26.88■■□□□ 1.89
LRRC42-202ENST00000371368 CLTCQ00610 1675 aaKnown RBP26.85■■□□□ 1.89
LRRC42-202ENST00000371368 MYOM3Q5VTT5 1437 aa26.85■■□□□ 1.89
LRRC42-202ENST00000371368 MIA2Q96PC5 1412 aa26.83■■□□□ 1.89
LRRC42-202ENST00000371368 NPATQ14207 1427 aa26.82■■□□□ 1.88
LRRC42-202ENST00000371368 KIF3BO15066 747 aa26.82■■□□□ 1.88
LRRC42-202ENST00000371368 DMRT2Q9Y5R5 561 aa26.79■■□□□ 1.88
LRRC42-202ENST00000371368 FBXO41Q8TF61 875 aa26.77■■□□□ 1.88
LRRC42-202ENST00000371368 STRCQ7RTU9 1775 aa26.76■■□□□ 1.88
LRRC42-202ENST00000371368 PTPRKQ15262 1439 aa26.75■■□□□ 1.87
LRRC42-202ENST00000371368 MAST1Q9Y2H9 1570 aa26.75■■□□□ 1.87
LRRC42-202ENST00000371368 WASHC2CQ9Y4E1 1318 aa26.7■■□□□ 1.87
LRRC42-202ENST00000371368 CERKQ8TCT0 537 aa26.67■■□□□ 1.86
LRRC42-202ENST00000371368 PTPN23Q9H3S7 1636 aa26.67■■□□□ 1.86
LRRC42-202ENST00000371368 PTPRTO14522 1441 aa26.66■■□□□ 1.86
LRRC42-202ENST00000371368 NCOA1Q15788 1441 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms