RNA–Protein interactions for RNA: ENST00000370888.5

LRRC1-202, Transcript of leucine rich repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-202ENST00000370888 MRS2Q9HD23 443 aa26.89■■□□□ 1.9
LRRC1-202ENST00000370888 ZNF326Q5BKZ1 582 aaKnown RBP26.89■■□□□ 1.9
LRRC1-202ENST00000370888 ZNF777Q9ULD5 760 aaPredicted RBP26.89■■□□□ 1.89
LRRC1-202ENST00000370888 PBRM1Q86U86 1689 aa26.88■■□□□ 1.89
LRRC1-202ENST00000370888 WDR62O43379 1518 aa26.88■■□□□ 1.89
LRRC1-202ENST00000370888 CNTLNQ9NXG0 1405 aa26.88■■□□□ 1.89
LRRC1-202ENST00000370888 PRKRIP1Q9H875 184 aaPredicted RBP26.87■■□□□ 1.89
LRRC1-202ENST00000370888 CCDC7Q96M83 1385 aa26.86■■□□□ 1.89
LRRC1-202ENST00000370888 DAPK1P53355 1430 aa26.86■■□□□ 1.89
LRRC1-202ENST00000370888 ZNF608Q9ULD9 1512 aaPredicted RBP26.86■■□□□ 1.89
LRRC1-202ENST00000370888 AKNAQ7Z591 1439 aa26.85■■□□□ 1.89
LRRC1-202ENST00000370888 ADAMTS12P58397 1594 aa26.85■■□□□ 1.89
LRRC1-202ENST00000370888 ANKRD30BQ9BXX2 1392 aa26.84■■□□□ 1.89
LRRC1-202ENST00000370888 ABCC5O15440 1437 aa26.83■■□□□ 1.89
LRRC1-202ENST00000370888 SENP3-EIF4A1A0A087X0R7 540 aa26.81■■□□□ 1.88
LRRC1-202ENST00000370888 KIF7Q2M1P5 1343 aa26.79■■□□□ 1.88
LRRC1-202ENST00000370888 NCOA1Q15788 1441 aa26.79■■□□□ 1.88
LRRC1-202ENST00000370888 FBLN2P98095 1184 aa26.78■■□□□ 1.88
LRRC1-202ENST00000370888 CFDP1Q9UEE9 299 aaPredicted RBP26.77■■□□□ 1.88
LRRC1-202ENST00000370888 CDK11AQ9UQ88 783 aaPredicted RBP26.77■■□□□ 1.88
LRRC1-202ENST00000370888 RPRD2Q5VT52 1461 aaKnown RBP26.77■■□□□ 1.88
LRRC1-202ENST00000370888 PRG4Q92954 1404 aaPredicted RBP26.75■■□□□ 1.87
LRRC1-202ENST00000370888 NUP153P49790 1475 aaKnown RBP26.75■■□□□ 1.87
LRRC1-202ENST00000370888 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
LRRC1-202ENST00000370888 ROCK1Q13464 1354 aa26.73■■□□□ 1.87
LRRC1-202ENST00000370888 DISP1Q96F81 1524 aa26.72■■□□□ 1.87
LRRC1-202ENST00000370888 TEX14Q8IWB6 1497 aa26.71■■□□□ 1.87
LRRC1-202ENST00000370888 B4GALNT3Q6L9W6 998 aa26.69■■□□□ 1.86
LRRC1-202ENST00000370888 MSH5O43196 834 aa26.67■■□□□ 1.86
LRRC1-202ENST00000370888 KIAA0586Q9BVV6 1533 aa26.67■■□□□ 1.86
LRRC1-202ENST00000370888 KIAA0556O60303 1618 aa26.67■■□□□ 1.86
LRRC1-202ENST00000370888 PKD2Q13563 968 aa26.66■■□□□ 1.86
LRRC1-202ENST00000370888 DNMT1P26358 1616 aaKnown RBP26.66■■□□□ 1.86
LRRC1-202ENST00000370888 CHMP7Q8WUX9 453 aaPredicted RBP26.65■■□□□ 1.86
LRRC1-202ENST00000370888 PPP4R2Q9NY27 417 aa26.63■■□□□ 1.85
LRRC1-202ENST00000370888 SPATA31E1Q6ZUB1 1445 aa26.63■■□□□ 1.85
LRRC1-202ENST00000370888 PLB1Q6P1J6 1458 aa26.63■■□□□ 1.85
LRRC1-202ENST00000370888 ZBED9Q6R2W3 1325 aa26.62■■□□□ 1.85
LRRC1-202ENST00000370888 CAMSAP2Q08AD1 1489 aa26.6■■□□□ 1.85
LRRC1-202ENST00000370888 RAPGEF6Q8TEU7 1601 aa26.6■■□□□ 1.85
LRRC1-202ENST00000370888 PZPP20742 1482 aa26.6■■□□□ 1.85
LRRC1-202ENST00000370888 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
LRRC1-202ENST00000370888 GRIN2AQ12879 1464 aa26.58■■□□□ 1.85
LRRC1-202ENST00000370888 USP47Q96K76 1375 aa26.57■■□□□ 1.84
LRRC1-202ENST00000370888 KDM2AQ9Y2K7 1162 aa26.57■■□□□ 1.84
LRRC1-202ENST00000370888 TROQ12816 1431 aaPredicted RBP26.57■■□□□ 1.84
LRRC1-202ENST00000370888 GPATCH8Q9UKJ3 1502 aaKnown RBP26.53■■□□□ 1.84
LRRC1-202ENST00000370888 KIAA1107Q9UPP5 1409 aa26.51■■□□□ 1.83
LRRC1-202ENST00000370888 KIF14Q15058 1648 aa26.5■■□□□ 1.83
LRRC1-202ENST00000370888 NUP155O75694 1391 aa26.49■■□□□ 1.83
LRRC1-202ENST00000370888 ANKRD30AQ9BXX3 1397 aa26.49■■□□□ 1.83
LRRC1-202ENST00000370888 ERICH6Q7L0X2 663 aa26.48■■□□□ 1.83
LRRC1-202ENST00000370888 JPH4Q96JJ6 628 aa26.48■■□□□ 1.83
LRRC1-202ENST00000370888 CARD11Q9BXL7 1154 aa26.48■■□□□ 1.83
LRRC1-202ENST00000370888 DHX29Q7Z478 1369 aaKnown RBP26.48■■□□□ 1.83
LRRC1-202ENST00000370888 ERICH6BQ5W0A0 696 aa26.47■■□□□ 1.83
LRRC1-202ENST00000370888 ANKRD50Q9ULJ7 1429 aa26.46■■□□□ 1.83
LRRC1-202ENST00000370888 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
LRRC1-202ENST00000370888 PLEKHD1A6NEE1 506 aa26.46■■□□□ 1.83
LRRC1-202ENST00000370888 FANCIQ9NVI1 1328 aa26.44■■□□□ 1.82
LRRC1-202ENST00000370888 HNRNPMP52272 730 aaKnown RBP eCLIP26.42■■□□□ 1.825e-7■■■■□ 26.5
LRRC1-202ENST00000370888 TMC1Q8TDI8 760 aa26.42■■□□□ 1.82
LRRC1-202ENST00000370888 DCAF11Q8TEB1 546 aa26.41■■□□□ 1.82
LRRC1-202ENST00000370888 BCORL1Q5H9F3 1711 aa26.41■■□□□ 1.82
LRRC1-202ENST00000370888 ST20-MTHFSA0A0A6YYL1 179 aa26.4■■□□□ 1.82
LRRC1-202ENST00000370888 TSPY4P0CV99 314 aa26.4■■□□□ 1.82
LRRC1-202ENST00000370888 TSPY10P0CW01 314 aa26.4■■□□□ 1.82
LRRC1-202ENST00000370888 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
LRRC1-202ENST00000370888 MBD5Q9P267 1494 aa26.4■■□□□ 1.82
LRRC1-202ENST00000370888 CEP170Q5SW79 1584 aa26.39■■□□□ 1.81
LRRC1-202ENST00000370888 SALL2Q9Y467 1007 aaPredicted RBP26.36■■□□□ 1.81
LRRC1-202ENST00000370888 CARMIL2Q6F5E8 1435 aa26.36■■□□□ 1.81
LRRC1-202ENST00000370888 NUDCQ9Y266 331 aa26.36■■□□□ 1.81
LRRC1-202ENST00000370888 ITSN2Q9NZM3 1697 aa26.34■■□□□ 1.81
LRRC1-202ENST00000370888 C9orf84Q5VXU9 1444 aa26.34■■□□□ 1.81
LRRC1-202ENST00000370888 ADGRL2O95490 1459 aa26.33■■□□□ 1.81
LRRC1-202ENST00000370888 PNISRQ8TF01 805 aaKnown RBP26.33■■□□□ 1.81
LRRC1-202ENST00000370888 ADGBQ8N7X0 1667 aa26.32■■□□□ 1.8
LRRC1-202ENST00000370888 SMG6Q86US8 1419 aaKnown RBP26.31■■□□□ 1.8
LRRC1-202ENST00000370888 RGL3Q3MIN7 710 aa26.31■■□□□ 1.8
LRRC1-202ENST00000370888 CCDC136Q96JN2 1154 aa26.31■■□□□ 1.8
LRRC1-202ENST00000370888 SYNJ2O15056 1496 aa26.31■■□□□ 1.8
LRRC1-202ENST00000370888 POLR1AO95602 1720 aaPredicted RBP26.3■■□□□ 1.8
LRRC1-202ENST00000370888 KDM5CP41229 1560 aa26.29■■□□□ 1.8
LRRC1-202ENST00000370888 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
LRRC1-202ENST00000370888 KIF15Q9NS87 1388 aa26.28■■□□□ 1.8
LRRC1-202ENST00000370888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.27■■□□□ 1.84e-8■■■■□ 26.2
LRRC1-202ENST00000370888 ATP10BO94823 1461 aa26.25■■□□□ 1.79
LRRC1-202ENST00000370888 CROCC2H7BZ55 1655 aa26.25■■□□□ 1.79
LRRC1-202ENST00000370888 ROCK2O75116 1388 aaKnown RBP26.24■■□□□ 1.79
LRRC1-202ENST00000370888 RALGAPBQ86X10 1494 aa26.23■■□□□ 1.79
LRRC1-202ENST00000370888 BCL11AQ9H165 835 aa26.22■■□□□ 1.79
LRRC1-202ENST00000370888 ARID4BQ4LE39 1312 aaPredicted RBP26.22■■□□□ 1.79
LRRC1-202ENST00000370888 ADCY10Q96PN6 1610 aa26.21■■□□□ 1.79
LRRC1-202ENST00000370888 UHRF1BP1Q6BDS2 1440 aa26.2■■□□□ 1.78
LRRC1-202ENST00000370888 ABCC10Q5T3U5 1492 aa26.19■■□□□ 1.78
LRRC1-202ENST00000370888 CDC42BPAQ5VT25 1732 aa26.19■■□□□ 1.78
LRRC1-202ENST00000370888 NBPF1Q3BBV0 1214 aa26.18■■□□□ 1.78
LRRC1-202ENST00000370888 MYBBP1AQ9BQG0 1328 aaKnown RBP26.16■■□□□ 1.78
LRRC1-202ENST00000370888 NUP160Q12769 1436 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms