RNA–Protein interactions for RNA: ENST00000369750.3

TPBG-201, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPBG, Length 6,484 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-201ENST00000369750 CEP162Q5TB80 1403 aa20.51■□□□□ 0.87
TPBG-201ENST00000369750 HNRNPMP52272 730 aaKnown RBP eCLIP20.51■□□□□ 0.87
TPBG-201ENST00000369750 TMF1P82094 1093 aa20.51■□□□□ 0.87
TPBG-201ENST00000369750 PNNQ9H307 717 aaKnown RBP20.5■□□□□ 0.87
TPBG-201ENST00000369750 NBR1Q14596 966 aa20.48■□□□□ 0.87
TPBG-201ENST00000369750 GTF2E1P29083 439 aaPredicted RBP20.47■□□□□ 0.87
TPBG-201ENST00000369750 APBB1O00213 710 aa20.46■□□□□ 0.87
TPBG-201ENST00000369750 DCAF1Q9Y4B6 1507 aa20.46■□□□□ 0.87
TPBG-201ENST00000369750 FAM69CQ0P6D2 419 aa20.45■□□□□ 0.86
TPBG-201ENST00000369750 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
TPBG-201ENST00000369750 SMARCA2P51531 1590 aa20.43■□□□□ 0.86
TPBG-201ENST00000369750 TAF7LQ5H9L4 462 aa20.42■□□□□ 0.86
TPBG-201ENST00000369750 PKD2Q13563 968 aa20.42■□□□□ 0.86
TPBG-201ENST00000369750 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.41■□□□□ 0.86
TPBG-201ENST00000369750 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
TPBG-201ENST00000369750 SYTL4Q96C24 671 aaPredicted RBP20.4■□□□□ 0.86
TPBG-201ENST00000369750 EEA1Q15075 1411 aa20.4■□□□□ 0.86
TPBG-201ENST00000369750 BAZ1AQ9NRL2 1556 aaPredicted RBP20.39■□□□□ 0.85
TPBG-201ENST00000369750 AMPHP49418 695 aa20.39■□□□□ 0.85
TPBG-201ENST00000369750 SPAG9O60271 1321 aaKnown RBP20.38■□□□□ 0.85
TPBG-201ENST00000369750 FRAT2O75474 233 aaPredicted RBP20.35■□□□□ 0.85
TPBG-201ENST00000369750 GORABQ5T7V8 394 aa20.35■□□□□ 0.85
TPBG-201ENST00000369750 ACIN1Q9UKV3 1341 aaKnown RBP20.34■□□□□ 0.85
TPBG-201ENST00000369750 RGS3P49796 1198 aa20.33■□□□□ 0.84
TPBG-201ENST00000369750 EIF5BO60841 1220 aaKnown RBP20.32■□□□□ 0.84
TPBG-201ENST00000369750 JPH4Q96JJ6 628 aa20.32■□□□□ 0.84
TPBG-201ENST00000369750 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
TPBG-201ENST00000369750 BECN1Q14457 450 aa20.29■□□□□ 0.84
TPBG-201ENST00000369750 U2AF1L5P0DN76 240 aaPredicted RBP20.29■□□□□ 0.84
TPBG-201ENST00000369750 U2AF1Q01081 240 aaKnown RBP eCLIP20.29■□□□□ 0.84
TPBG-201ENST00000369750 PPP1R1BQ9UD71 204 aaPredicted RBP20.29■□□□□ 0.84
TPBG-201ENST00000369750 MIER1Q8N108 512 aa20.28■□□□□ 0.84
TPBG-201ENST00000369750 NUP155O75694 1391 aa20.28■□□□□ 0.84
TPBG-201ENST00000369750 PLCB2Q00722 1185 aa20.28■□□□□ 0.84
TPBG-201ENST00000369750 FBXW7Q969H0 707 aa20.28■□□□□ 0.84
TPBG-201ENST00000369750 GNL2Q13823 731 aaKnown RBP20.27■□□□□ 0.84
TPBG-201ENST00000369750 NGEFQ8N5V2 710 aa20.25■□□□□ 0.83
TPBG-201ENST00000369750 TRAK1Q9UPV9 953 aa20.25■□□□□ 0.83
TPBG-201ENST00000369750 ROCK2O75116 1388 aaKnown RBP20.25■□□□□ 0.83
TPBG-201ENST00000369750 PIP4K2BP78356 416 aa20.24■□□□□ 0.83
TPBG-201ENST00000369750 GOLGA6L22H0YM25 854 aa20.24■□□□□ 0.83
TPBG-201ENST00000369750 PSME1Q06323 249 aa20.21■□□□□ 0.83
TPBG-201ENST00000369750 ATF3P18847 181 aa20.21■□□□□ 0.83
TPBG-201ENST00000369750 PRM3Q9NNZ6 103 aa20.21■□□□□ 0.83
TPBG-201ENST00000369750 ARHGAP35Q9NRY4 1499 aa20.21■□□□□ 0.83
TPBG-201ENST00000369750 VPS53Q5VIR6 699 aa20.21■□□□□ 0.83
TPBG-201ENST00000369750 CHMP4BQ9H444 224 aaKnown RBP20.21■□□□□ 0.83
TPBG-201ENST00000369750 NUTM2BA6NNL0 878 aaPredicted RBP20.2■□□□□ 0.82
TPBG-201ENST00000369750 NUTM2EB1AL46 878 aaPredicted RBP20.2■□□□□ 0.82
TPBG-201ENST00000369750 NUTM2AQ8IVF1 878 aaPredicted RBP20.2■□□□□ 0.82
TPBG-201ENST00000369750 PTMAP06454 111 aaKnown RBP20.19■□□□□ 0.82
TPBG-201ENST00000369750 SLC4A10Q6U841 1118 aa20.19■□□□□ 0.82
TPBG-201ENST00000369750 RAD21O60216 631 aa20.19■□□□□ 0.82
TPBG-201ENST00000369750 ABCC8Q09428 1581 aa20.18■□□□□ 0.82
TPBG-201ENST00000369750 ANO8Q9HCE9 1232 aaPredicted RBP20.18■□□□□ 0.82
TPBG-201ENST00000369750 TERF2IPQ9NYB0 399 aa20.17■□□□□ 0.82
TPBG-201ENST00000369750 HSP90AB1P08238 724 aaKnown RBP20.17■□□□□ 0.82
TPBG-201ENST00000369750 STK31Q9BXU1 1019 aa20.16■□□□□ 0.82
TPBG-201ENST00000369750 ANKRD30AQ9BXX3 1397 aa20.15■□□□□ 0.82
TPBG-201ENST00000369750 C1orf141Q5JVX7 400 aa20.15■□□□□ 0.82
TPBG-201ENST00000369750 MS4A1P11836 297 aa20.15■□□□□ 0.82
TPBG-201ENST00000369750 SF3B2Q13435 895 aaKnown RBP20.15■□□□□ 0.82
TPBG-201ENST00000369750 TNIKQ9UKE5 1360 aa20.15■□□□□ 0.82
TPBG-201ENST00000369750 SUPT16HQ9Y5B9 1047 aaKnown RBP20.14■□□□□ 0.81
TPBG-201ENST00000369750 CCDC88BA6NC98 1476 aa20.14■□□□□ 0.81
TPBG-201ENST00000369750 TOMM22Q9NS69 142 aa20.13■□□□□ 0.81
TPBG-201ENST00000369750 CWC22Q9HCG8 908 aaKnown RBP20.12■□□□□ 0.81
TPBG-201ENST00000369750 USP35Q9P2H5 1018 aa20.12■□□□□ 0.81
TPBG-201ENST00000369750 GOLGA6L4A6NEF3 574 aa20.1■□□□□ 0.81
TPBG-201ENST00000369750 SPRYD3Q8NCJ5 442 aa20.1■□□□□ 0.81
TPBG-201ENST00000369750 MINK1Q8N4C8 1332 aaPredicted RBP20.1■□□□□ 0.81
TPBG-201ENST00000369750 PTPRGP23470 1445 aa20.1■□□□□ 0.81
TPBG-201ENST00000369750 B4GALNT3Q6L9W6 998 aa20.1■□□□□ 0.81
TPBG-201ENST00000369750 NUTM2GQ5VZR2 741 aa20.09■□□□□ 0.81
TPBG-201ENST00000369750 ITPRIPQ8IWB1 547 aa20.09■□□□□ 0.81
TPBG-201ENST00000369750 PDE4CQ08493 712 aa20.09■□□□□ 0.81
TPBG-201ENST00000369750 KIAA1211Q6ZU35 1233 aa20.08■□□□□ 0.81
TPBG-201ENST00000369750 TRIM34Q9BYJ4 488 aa20.08■□□□□ 0.8
TPBG-201ENST00000369750 EIF3AQ14152 1382 aaKnown RBP20.08■□□□□ 0.8
TPBG-201ENST00000369750 DDRGK1Q96HY6 314 aa20.08■□□□□ 0.8
TPBG-201ENST00000369750 MPHOSPH9Q99550 1183 aa20.08■□□□□ 0.8
TPBG-201ENST00000369750 CCDC146Q8IYE0 955 aa20.07■□□□□ 0.8
TPBG-201ENST00000369750 MCCP23508 829 aa20.07■□□□□ 0.8
TPBG-201ENST00000369750 CADPSQ9ULU8 1353 aa20.07■□□□□ 0.8
TPBG-201ENST00000369750 SAMD1Q6SPF0 538 aaPredicted RBP20.06■□□□□ 0.8
TPBG-201ENST00000369750 FHOD3Q2V2M9 1422 aa20.06■□□□□ 0.8
TPBG-201ENST00000369750 HSPA5P11021 654 aaKnown RBP20.06■□□□□ 0.8
TPBG-201ENST00000369750 KANK4Q5T7N3 995 aaPredicted RBP20.06■□□□□ 0.8
TPBG-201ENST00000369750 KRI1Q8N9T8 703 aaKnown RBP20.06■□□□□ 0.8
TPBG-201ENST00000369750 CTDP1Q9Y5B0 961 aaPredicted RBP20.05■□□□□ 0.8
TPBG-201ENST00000369750 CALD1Q05682 793 aaKnown RBP20.05■□□□□ 0.8
TPBG-201ENST00000369750 TTC5Q8N0Z6 440 aa20.05■□□□□ 0.8
TPBG-201ENST00000369750 TRIM44Q96DX7 344 aaPredicted RBP20.05■□□□□ 0.8
TPBG-201ENST00000369750 DNTTIP2Q5QJE6 756 aaKnown RBP20.03■□□□□ 0.8
TPBG-201ENST00000369750 KTN1Q86UP2 1357 aaKnown RBP20.02■□□□□ 0.8
TPBG-201ENST00000369750 HSP90B1P14625 803 aaKnown RBP20.02■□□□□ 0.8
TPBG-201ENST00000369750 COG3Q96JB2 828 aa20.02■□□□□ 0.8
TPBG-201ENST00000369750 MROH2BQ7Z745 1585 aa20.02■□□□□ 0.79
TPBG-201ENST00000369750 NECTIN2Q92692 538 aa20.01■□□□□ 0.79
TPBG-201ENST00000369750 TRIM6-TRIM34B2RNG4 842 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms