RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ARHGAP5Q13017 1502 aa35.61■■■■□ 3.29
ECHDC1-203ENST00000368291 EFCAB2Q5VUJ9 269 aa35.59■■■■□ 3.29
ECHDC1-203ENST00000368291 DENND4BO75064 1496 aaPredicted RBP35.57■■■■□ 3.29
ECHDC1-203ENST00000368291 ADGRL1O94910 1474 aa35.56■■■■□ 3.28
ECHDC1-203ENST00000368291 MAP3K1Q13233 1512 aa35.55■■■■□ 3.28
ECHDC1-203ENST00000368291 GPATCH8Q9UKJ3 1502 aaKnown RBP35.54■■■■□ 3.28
ECHDC1-203ENST00000368291 SCAPERQ9BY12 1400 aa35.53■■■■□ 3.28
ECHDC1-203ENST00000368291 LRRC9Q6ZRR7 1453 aa35.49■■■■□ 3.27
ECHDC1-203ENST00000368291 SUPT6HQ7KZ85 1726 aaKnown RBP35.49■■■■□ 3.27
ECHDC1-203ENST00000368291 POGZQ7Z3K3 1410 aa35.46■■■■□ 3.27
ECHDC1-203ENST00000368291 ZMYM4Q5VZL5 1548 aa35.45■■■■□ 3.27
ECHDC1-203ENST00000368291 CCNB3Q8WWL7 1395 aa35.44■■■■□ 3.26
ECHDC1-203ENST00000368291 ABCC1P33527 1531 aa35.44■■■■□ 3.26
ECHDC1-203ENST00000368291 KANK4Q5T7N3 995 aaPredicted RBP35.43■■■■□ 3.26
ECHDC1-203ENST00000368291 NCOA2Q15596 1464 aa35.43■■■■□ 3.26
ECHDC1-203ENST00000368291 SAMD9LQ8IVG5 1584 aa35.42■■■■□ 3.26
ECHDC1-203ENST00000368291 ITSN2Q9NZM3 1697 aa35.41■■■■□ 3.26
ECHDC1-203ENST00000368291 ARHGEF12Q9NZN5 1544 aa35.41■■■■□ 3.26
ECHDC1-203ENST00000368291 ARHGEF40Q8TER5 1519 aa35.36■■■■□ 3.25
ECHDC1-203ENST00000368291 KDM5CP41229 1560 aa35.35■■■■□ 3.25
ECHDC1-203ENST00000368291 ZNF518AQ6AHZ1 1483 aa35.35■■■■□ 3.25
ECHDC1-203ENST00000368291 CFDP1Q9UEE9 299 aaPredicted RBP35.34■■■■□ 3.25
ECHDC1-203ENST00000368291 ZNF777Q9ULD5 760 aaPredicted RBP35.33■■■■□ 3.25
ECHDC1-203ENST00000368291 KDM4FA0A1W2PPD8 638 aa35.32■■■■□ 3.24
ECHDC1-203ENST00000368291 TRAPPC8Q9Y2L5 1435 aa35.32■■■■□ 3.24
ECHDC1-203ENST00000368291 MAGI2Q86UL8 1455 aa35.32■■■■□ 3.24
ECHDC1-203ENST00000368291 YEATS2Q9ULM3 1422 aa35.3■■■■□ 3.24
ECHDC1-203ENST00000368291 AFAP1Q8N556 730 aa35.3■■■■□ 3.24
ECHDC1-203ENST00000368291 ZFYVE16Q7Z3T8 1539 aa35.3■■■■□ 3.24
ECHDC1-203ENST00000368291 SYCP2Q9BX26 1530 aa35.29■■■■□ 3.24
ECHDC1-203ENST00000368291 APLP2Q06481 763 aa35.27■■■■□ 3.24
ECHDC1-203ENST00000368291 KIAA1107Q9UPP5 1409 aa35.24■■■■□ 3.23
ECHDC1-203ENST00000368291 ZNF644Q9H582 1327 aaPredicted RBP35.24■■■■□ 3.23
ECHDC1-203ENST00000368291 HECW2Q9P2P5 1572 aa35.24■■■■□ 3.23
ECHDC1-203ENST00000368291 SIGLEC1Q9BZZ2 1709 aa35.23■■■■□ 3.23
ECHDC1-203ENST00000368291 PLEKHH2Q8IVE3 1493 aa35.23■■■■□ 3.23
ECHDC1-203ENST00000368291 HNRNPMP52272 730 aaKnown RBP eCLIP35.21■■■■□ 3.233e-8■■■■■ 29
ECHDC1-203ENST00000368291 MLH3Q9UHC1 1453 aa35.19■■■■□ 3.22
ECHDC1-203ENST00000368291 KIDINS220Q9ULH0 1771 aa35.18■■■■□ 3.22
ECHDC1-203ENST00000368291 MBD5Q9P267 1494 aa35.15■■■■□ 3.22
ECHDC1-203ENST00000368291 ABCA6Q8N139 1617 aa35.14■■■■□ 3.22
ECHDC1-203ENST00000368291 CAMSAP2Q08AD1 1489 aa35.14■■■■□ 3.22
ECHDC1-203ENST00000368291 DIP2CQ9Y2E4 1556 aa35.14■■■■□ 3.22
ECHDC1-203ENST00000368291 ATP10AO60312 1499 aa35.13■■■■□ 3.21
ECHDC1-203ENST00000368291 MYOM3Q5VTT5 1437 aa35.13■■■■□ 3.21
ECHDC1-203ENST00000368291 BCORL1Q5H9F3 1711 aa35.12■■■■□ 3.21
ECHDC1-203ENST00000368291 AEBP2Q6ZN18 517 aaPredicted RBP35.11■■■■□ 3.21
ECHDC1-203ENST00000368291 ADAMTSL3P82987 1691 aa35.09■■■■□ 3.21
ECHDC1-203ENST00000368291 C9orf84Q5VXU9 1444 aa35.08■■■■□ 3.21
ECHDC1-203ENST00000368291 INO80Q9ULG1 1556 aaPredicted RBP35.07■■■■□ 3.2
ECHDC1-203ENST00000368291 MIA2Q96PC5 1412 aa35.06■■■■□ 3.2
ECHDC1-203ENST00000368291 MYT1LQ9UL68 1186 aa35.05■■■■□ 3.2
ECHDC1-203ENST00000368291 ARID4BQ4LE39 1312 aaPredicted RBP35.04■■■■□ 3.2
ECHDC1-203ENST00000368291 ATP7AQ04656 1500 aa35.03■■■■□ 3.2
ECHDC1-203ENST00000368291 REREQ9P2R6 1566 aa35.03■■■■□ 3.2
ECHDC1-203ENST00000368291 SPAG9O60271 1321 aaKnown RBP35.03■■■■□ 3.2
ECHDC1-203ENST00000368291 ARHGEF5Q12774 1597 aa35.01■■■■□ 3.2
ECHDC1-203ENST00000368291 CCDC141Q6ZP82 1450 aa34.99■■■■□ 3.19
ECHDC1-203ENST00000368291 MADDQ8WXG6 1647 aa34.96■■■■□ 3.19
ECHDC1-203ENST00000368291 PTPN23Q9H3S7 1636 aa34.95■■■■□ 3.19
ECHDC1-203ENST00000368291 RSPH4AQ5TD94 716 aa34.93■■■■□ 3.18
ECHDC1-203ENST00000368291 FGD6Q6ZV73 1430 aa34.93■■■■□ 3.18
ECHDC1-203ENST00000368291 RTEL1-TNFRSF6BF6WH68 1400 aa34.92■■■■□ 3.18
ECHDC1-203ENST00000368291 AGLP35573 1532 aa34.9■■■■□ 3.18
ECHDC1-203ENST00000368291 ADGBQ8N7X0 1667 aa34.89■■■■□ 3.18
ECHDC1-203ENST00000368291 TCOF1Q13428 1488 aaKnown RBP34.88■■■■□ 3.17
ECHDC1-203ENST00000368291 RIMS1Q86UR5 1692 aaKnown RBP34.86■■■■□ 3.17
ECHDC1-203ENST00000368291 PLXNC1O60486 1568 aa34.86■■■■□ 3.17
ECHDC1-203ENST00000368291 FER1L4A9Z1Z3 1794 aa34.86■■■■□ 3.17
ECHDC1-203ENST00000368291 MLECQ14165 292 aa34.85■■■■□ 3.17
ECHDC1-203ENST00000368291 MAST1Q9Y2H9 1570 aa34.83■■■■□ 3.17
ECHDC1-203ENST00000368291 A2MP01023 1474 aa34.83■■■■□ 3.17
ECHDC1-203ENST00000368291 PTPRMP28827 1452 aa34.83■■■■□ 3.17
ECHDC1-203ENST00000368291 PPARGC1BQ86YN6 1023 aaKnown RBP34.8■■■■□ 3.16
ECHDC1-203ENST00000368291 CROCC2H7BZ55 1655 aa34.8■■■■□ 3.16
ECHDC1-203ENST00000368291 DNMT1P26358 1616 aaKnown RBP34.78■■■■□ 3.16
ECHDC1-203ENST00000368291 TSPY4P0CV99 314 aa34.77■■■■□ 3.16
ECHDC1-203ENST00000368291 TSPY10P0CW01 314 aa34.77■■■■□ 3.16
ECHDC1-203ENST00000368291 ABCC5O15440 1437 aa34.75■■■■□ 3.15
ECHDC1-203ENST00000368291 DAPK1P53355 1430 aa34.71■■■■□ 3.15
ECHDC1-203ENST00000368291 DHX29Q7Z478 1369 aaKnown RBP34.71■■■■□ 3.15
ECHDC1-203ENST00000368291 SHANK2Q9UPX8 1470 aa34.69■■■■□ 3.14
ECHDC1-203ENST00000368291 FAM50AQ14320 339 aaKnown RBP34.62■■■■□ 3.13
ECHDC1-203ENST00000368291 C3P01024 1663 aa34.57■■■■□ 3.12
ECHDC1-203ENST00000368291 GGT6Q6P531 493 aa34.55■■■■□ 3.12
ECHDC1-203ENST00000368291 MROH2AA6NES4 1674 aa34.54■■■■□ 3.12
ECHDC1-203ENST00000368291 CLTCQ00610 1675 aaKnown RBP34.54■■■■□ 3.12
ECHDC1-203ENST00000368291 KIF3BO15066 747 aa34.54■■■■□ 3.12
ECHDC1-203ENST00000368291 DUOX2Q9NRD8 1548 aa34.54■■■■□ 3.12
ECHDC1-203ENST00000368291 EIF2AK4Q9P2K8 1649 aaKnown RBP34.53■■■■□ 3.12
ECHDC1-203ENST00000368291 CEBPAP49715 358 aaPredicted RBP34.52■■■■□ 3.12
ECHDC1-203ENST00000368291 PLPPR3Q6T4P5 718 aa34.52■■■■□ 3.12
ECHDC1-203ENST00000368291 CNTLNQ9NXG0 1405 aa34.52■■■■□ 3.12
ECHDC1-203ENST00000368291 KIF15Q9NS87 1388 aa34.51■■■■□ 3.12
ECHDC1-203ENST00000368291 CHIC2Q9UKJ5 165 aa34.51■■■■□ 3.12
ECHDC1-203ENST00000368291 ADGRL2O95490 1459 aa34.5■■■■□ 3.11
ECHDC1-203ENST00000368291 RNF17Q9BXT8 1623 aaKnown RBP34.49■■■■□ 3.11
ECHDC1-203ENST00000368291 PTPRKQ15262 1439 aa34.49■■■■□ 3.11
ECHDC1-203ENST00000368291 ESF1Q9H501 851 aaKnown RBP34.49■■■■□ 3.11
ECHDC1-203ENST00000368291 RRP7BPQ9NSQ0 103 aa34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms