RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 PLCH2O75038 1416 aa22.29■■□□□ 1.16
PMF1-202ENST00000368277 CDC42BPBQ9Y5S2 1711 aa22.28■■□□□ 1.16
PMF1-202ENST00000368277 SCAPERQ9BY12 1400 aa22.27■■□□□ 1.16
PMF1-202ENST00000368277 FER1L4A9Z1Z3 1794 aa22.27■■□□□ 1.16
PMF1-202ENST00000368277 POGZQ7Z3K3 1410 aa22.26■■□□□ 1.15
PMF1-202ENST00000368277 TROQ12816 1431 aaPredicted RBP22.25■■□□□ 1.15
PMF1-202ENST00000368277 ILDR1Q86SU0 546 aaPredicted RBP22.24■■□□□ 1.15
PMF1-202ENST00000368277 ARHGAP5Q13017 1502 aa22.24■■□□□ 1.15
PMF1-202ENST00000368277 PLPPR3Q6T4P5 718 aa22.22■■□□□ 1.15
PMF1-202ENST00000368277 PREX2Q70Z35 1606 aa22.2■■□□□ 1.15
PMF1-202ENST00000368277 CDC42BPAQ5VT25 1732 aa22.2■■□□□ 1.14
PMF1-202ENST00000368277 CLIP1P30622 1438 aa22.19■■□□□ 1.14
PMF1-202ENST00000368277 MAGI2Q86UL8 1455 aa22.18■■□□□ 1.14
PMF1-202ENST00000368277 CASKIN1Q8WXD9 1431 aa22.18■■□□□ 1.14
PMF1-202ENST00000368277 MLECQ14165 292 aa22.18■■□□□ 1.14
PMF1-202ENST00000368277 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
PMF1-202ENST00000368277 ITSN2Q9NZM3 1697 aa22.17■■□□□ 1.14
PMF1-202ENST00000368277 EFCAB2Q5VUJ9 269 aa22.16■■□□□ 1.14
PMF1-202ENST00000368277 CCDC18Q5T9S5 1454 aa22.15■■□□□ 1.14
PMF1-202ENST00000368277 LMTK3Q96Q04 1460 aa22.15■■□□□ 1.14
PMF1-202ENST00000368277 KDM5CP41229 1560 aa22.15■■□□□ 1.14
PMF1-202ENST00000368277 ABCA6Q8N139 1617 aa22.13■■□□□ 1.13
PMF1-202ENST00000368277 DIP2CQ9Y2E4 1556 aa22.12■■□□□ 1.13
PMF1-202ENST00000368277 FYCO1Q9BQS8 1478 aa22.12■■□□□ 1.13
PMF1-202ENST00000368277 C9orf84Q5VXU9 1444 aa22.12■■□□□ 1.13
PMF1-202ENST00000368277 ABCC1P33527 1531 aa22.11■■□□□ 1.13
PMF1-202ENST00000368277 ATP10AO60312 1499 aa22.11■■□□□ 1.13
PMF1-202ENST00000368277 ZNF518AQ6AHZ1 1483 aa22.11■■□□□ 1.13
PMF1-202ENST00000368277 ARHGEF12Q9NZN5 1544 aa22.1■■□□□ 1.13
PMF1-202ENST00000368277 AFAP1Q8N556 730 aa22.09■■□□□ 1.13
PMF1-202ENST00000368277 TRAPPC8Q9Y2L5 1435 aa22.06■■□□□ 1.12
PMF1-202ENST00000368277 KIDINS220Q9ULH0 1771 aa22.05■■□□□ 1.12
PMF1-202ENST00000368277 HSPA2P54652 639 aa22.05■■□□□ 1.12
PMF1-202ENST00000368277 MYT1LQ9UL68 1186 aa22.05■■□□□ 1.12
PMF1-202ENST00000368277 SAMD9LQ8IVG5 1584 aa22.04■■□□□ 1.12
PMF1-202ENST00000368277 PREX1Q8TCU6 1659 aa22.01■■□□□ 1.11
PMF1-202ENST00000368277 SYCP2Q9BX26 1530 aa22■■□□□ 1.11
PMF1-202ENST00000368277 REREQ9P2R6 1566 aa21.99■■□□□ 1.11
PMF1-202ENST00000368277 C3P01024 1663 aa21.98■■□□□ 1.11
PMF1-202ENST00000368277 MLH3Q9UHC1 1453 aa21.98■■□□□ 1.11
PMF1-202ENST00000368277 CEBPAP49715 358 aaPredicted RBP21.98■■□□□ 1.11
PMF1-202ENST00000368277 ZNF777Q9ULD5 760 aaPredicted RBP21.97■■□□□ 1.11
PMF1-202ENST00000368277 SUPT6HQ7KZ85 1726 aaKnown RBP21.96■■□□□ 1.11
PMF1-202ENST00000368277 GPATCH8Q9UKJ3 1502 aaKnown RBP21.96■■□□□ 1.11
PMF1-202ENST00000368277 TIAM1Q13009 1591 aa21.91■■□□□ 1.1
PMF1-202ENST00000368277 AGLP35573 1532 aa21.9■■□□□ 1.1
PMF1-202ENST00000368277 CEP162Q5TB80 1403 aa21.89■■□□□ 1.1
PMF1-202ENST00000368277 STRCQ7RTU9 1775 aa21.89■■□□□ 1.1
PMF1-202ENST00000368277 INO80Q9ULG1 1556 aaPredicted RBP21.88■■□□□ 1.09
PMF1-202ENST00000368277 SETD1BQ9UPS6 1966 aaKnown RBP21.88■■□□□ 1.09
PMF1-202ENST00000368277 MTUS2Q5JR59 1369 aa21.87■■□□□ 1.09
PMF1-202ENST00000368277 HNRNPMP52272 730 aaKnown RBP eCLIP21.87■■□□□ 1.09
PMF1-202ENST00000368277 ATP7AQ04656 1500 aa21.86■■□□□ 1.09
PMF1-202ENST00000368277 EHBP1L1Q8N3D4 1523 aa21.86■■□□□ 1.09
PMF1-202ENST00000368277 CCNB3Q8WWL7 1395 aa21.86■■□□□ 1.09
PMF1-202ENST00000368277 CLTCQ00610 1675 aaKnown RBP21.84■■□□□ 1.09
PMF1-202ENST00000368277 FBXO41Q8TF61 875 aa21.83■■□□□ 1.09
PMF1-202ENST00000368277 CFDP1Q9UEE9 299 aaPredicted RBP21.82■■□□□ 1.08
PMF1-202ENST00000368277 SPAG9O60271 1321 aaKnown RBP21.81■■□□□ 1.08
PMF1-202ENST00000368277 PLXNC1O60486 1568 aa21.81■■□□□ 1.08
PMF1-202ENST00000368277 MROH2AA6NES4 1674 aa21.81■■□□□ 1.08
PMF1-202ENST00000368277 UHRF1BP1Q6BDS2 1440 aa21.8■■□□□ 1.08
PMF1-202ENST00000368277 ZNF644Q9H582 1327 aaPredicted RBP21.8■■□□□ 1.08
PMF1-202ENST00000368277 ADGBQ8N7X0 1667 aa21.79■■□□□ 1.08
PMF1-202ENST00000368277 PLEKHH2Q8IVE3 1493 aa21.78■■□□□ 1.08
PMF1-202ENST00000368277 KIAA1107Q9UPP5 1409 aa21.77■■□□□ 1.08
PMF1-202ENST00000368277 ESF1Q9H501 851 aaKnown RBP21.75■■□□□ 1.07
PMF1-202ENST00000368277 A2MP01023 1474 aa21.75■■□□□ 1.07
PMF1-202ENST00000368277 MBD5Q9P267 1494 aa21.72■■□□□ 1.07
PMF1-202ENST00000368277 LOC105371045A0A1W2PR82 267 aa21.72■■□□□ 1.07
PMF1-202ENST00000368277 CNTLNQ9NXG0 1405 aa21.72■■□□□ 1.07
PMF1-202ENST00000368277 NCOA2Q15596 1464 aa21.71■■□□□ 1.07
PMF1-202ENST00000368277 MYO3AQ8NEV4 1616 aa21.7■■□□□ 1.06
PMF1-202ENST00000368277 CAMSAP2Q08AD1 1489 aa21.7■■□□□ 1.06
PMF1-202ENST00000368277 CERKQ8TCT0 537 aa21.67■■□□□ 1.06
PMF1-202ENST00000368277 ZNF142P52746 1687 aaPredicted RBP21.66■■□□□ 1.06
PMF1-202ENST00000368277 ZMYM3Q14202 1370 aa21.66■■□□□ 1.06
PMF1-202ENST00000368277 CAMSAP1Q5T5Y3 1602 aa21.66■■□□□ 1.06
PMF1-202ENST00000368277 GGT6Q6P531 493 aa21.65■■□□□ 1.06
PMF1-202ENST00000368277 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
PMF1-202ENST00000368277 CCDC141Q6ZP82 1450 aa21.63■■□□□ 1.05
PMF1-202ENST00000368277 NCOA1Q15788 1441 aa21.62■■□□□ 1.05
PMF1-202ENST00000368277 NPATQ14207 1427 aa21.61■■□□□ 1.05
PMF1-202ENST00000368277 CEP170BQ9Y4F5 1589 aaPredicted RBP21.6■■□□□ 1.05
PMF1-202ENST00000368277 LRRC9Q6ZRR7 1453 aa21.59■■□□□ 1.05
PMF1-202ENST00000368277 PTPRKQ15262 1439 aa21.59■■□□□ 1.05
PMF1-202ENST00000368277 ARHGEF5Q12774 1597 aa21.58■■□□□ 1.05
PMF1-202ENST00000368277 RTEL1-TNFRSF6BF6WH68 1400 aa21.58■■□□□ 1.05
PMF1-202ENST00000368277 PTPRTO14522 1441 aa21.57■■□□□ 1.04
PMF1-202ENST00000368277 LTBP4Q8N2S1 1624 aa21.55■■□□□ 1.04
PMF1-202ENST00000368277 DMRT2Q9Y5R5 561 aa21.55■■□□□ 1.04
PMF1-202ENST00000368277 DHX29Q7Z478 1369 aaKnown RBP21.55■■□□□ 1.04
PMF1-202ENST00000368277 KANK4Q5T7N3 995 aaPredicted RBP21.53■■□□□ 1.04
PMF1-202ENST00000368277 NCKAP5LQ9HCH0 1330 aa21.53■■□□□ 1.04
PMF1-202ENST00000368277 KDM5DQ9BY66 1539 aa21.51■■□□□ 1.03
PMF1-202ENST00000368277 KIF3BO15066 747 aa21.51■■□□□ 1.03
PMF1-202ENST00000368277 DNMT1P26358 1616 aaKnown RBP21.51■■□□□ 1.03
PMF1-202ENST00000368277 CFAP65Q6ZU64 1925 aaKnown RBP21.51■■□□□ 1.03
PMF1-202ENST00000368277 POLR1AO95602 1720 aaPredicted RBP21.5■■□□□ 1.03
PMF1-202ENST00000368277 CEP152O94986 1710 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms