RNA–Protein interactions for RNA: ENST00000368258.7

CCT3-203, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-203ENST00000368258 IPO9Q96P70 1041 aaKnown RBP16.73■□□□□ 0.27
CCT3-203ENST00000368258 CUL7Q14999 1698 aa16.72■□□□□ 0.27
CCT3-203ENST00000368258 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.27
CCT3-203ENST00000368258 GRIN2BQ13224 1484 aa16.71■□□□□ 0.27
CCT3-203ENST00000368258 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
CCT3-203ENST00000368258 ANP32AP39687 249 aaKnown RBP16.71■□□□□ 0.27
CCT3-203ENST00000368258 SUPT6HQ7KZ85 1726 aaKnown RBP16.7■□□□□ 0.26
CCT3-203ENST00000368258 DENND4BO75064 1496 aaPredicted RBP16.69■□□□□ 0.26
CCT3-203ENST00000368258 EHBP1L1Q8N3D4 1523 aa16.69■□□□□ 0.26
CCT3-203ENST00000368258 PBRM1Q86U86 1689 aa16.68■□□□□ 0.26
CCT3-203ENST00000368258 TCOF1Q13428 1488 aaKnown RBP16.68■□□□□ 0.26
CCT3-203ENST00000368258 RTL5Q5HYW3 569 aaPredicted RBP16.68■□□□□ 0.26
CCT3-203ENST00000368258 CCDC184Q52MB2 194 aa16.67■□□□□ 0.26
CCT3-203ENST00000368258 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
CCT3-203ENST00000368258 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
CCT3-203ENST00000368258 SAMD9Q5K651 1589 aa16.66■□□□□ 0.26
CCT3-203ENST00000368258 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
CCT3-203ENST00000368258 MTUS2Q5JR59 1369 aa16.65■□□□□ 0.26
CCT3-203ENST00000368258 UGGT2Q9NYU1 1516 aa16.65■□□□□ 0.26
CCT3-203ENST00000368258 LRRIQ1Q96JM4 1722 aa16.65■□□□□ 0.26
CCT3-203ENST00000368258 NBR1Q14596 966 aa16.65■□□□□ 0.26
CCT3-203ENST00000368258 ABCA10Q8WWZ4 1543 aa16.64■□□□□ 0.25
CCT3-203ENST00000368258 SPATA31E1Q6ZUB1 1445 aa16.63■□□□□ 0.25
CCT3-203ENST00000368258 ZBTB47Q9UFB7 747 aaPredicted RBP16.63■□□□□ 0.25
CCT3-203ENST00000368258 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
CCT3-203ENST00000368258 FBLN2P98095 1184 aa16.62■□□□□ 0.25
CCT3-203ENST00000368258 USP35Q9P2H5 1018 aa16.62■□□□□ 0.25
CCT3-203ENST00000368258 FAM9BQ8IZU0 186 aa16.61■□□□□ 0.25
CCT3-203ENST00000368258 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
CCT3-203ENST00000368258 CYB5RLQ6IPT4 315 aa16.6■□□□□ 0.25
CCT3-203ENST00000368258 TEX14Q8IWB6 1497 aa16.59■□□□□ 0.25
CCT3-203ENST00000368258 CHMP7Q8WUX9 453 aaPredicted RBP16.59■□□□□ 0.25
CCT3-203ENST00000368258 MIA2Q96PC5 1412 aa16.58■□□□□ 0.24
CCT3-203ENST00000368258 CCDC136Q96JN2 1154 aa16.58■□□□□ 0.24
CCT3-203ENST00000368258 RPRD2Q5VT52 1461 aaKnown RBP16.58■□□□□ 0.24
CCT3-203ENST00000368258 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
CCT3-203ENST00000368258 P3H3Q8IVL6 736 aa16.56■□□□□ 0.24
CCT3-203ENST00000368258 ATP1B4Q9UN42 357 aaPredicted RBP16.56■□□□□ 0.24
CCT3-203ENST00000368258 ANO8Q9HCE9 1232 aaPredicted RBP16.54■□□□□ 0.24
CCT3-203ENST00000368258 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
CCT3-203ENST00000368258 DHX29Q7Z478 1369 aaKnown RBP16.54■□□□□ 0.24
CCT3-203ENST00000368258 L3MBTL2Q969R5 705 aa16.53■□□□□ 0.24
CCT3-203ENST00000368258 WASHC2CQ9Y4E1 1318 aa16.53■□□□□ 0.24
CCT3-203ENST00000368258 KDM6BO15054 1643 aa16.52■□□□□ 0.24
CCT3-203ENST00000368258 ARID4BQ4LE39 1312 aaPredicted RBP16.52■□□□□ 0.23
CCT3-203ENST00000368258 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
CCT3-203ENST00000368258 ANKRD30BQ9BXX2 1392 aa16.51■□□□□ 0.23
CCT3-203ENST00000368258 TCERG1O14776 1098 aaKnown RBP16.5■□□□□ 0.23
CCT3-203ENST00000368258 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
CCT3-203ENST00000368258 MPHOSPH9Q99550 1183 aa16.5■□□□□ 0.23
CCT3-203ENST00000368258 MS4A1P11836 297 aa16.48■□□□□ 0.23
CCT3-203ENST00000368258 ROCK1Q13464 1354 aa16.48■□□□□ 0.23
CCT3-203ENST00000368258 PPM1GO15355 546 aaPredicted RBP16.48■□□□□ 0.23
CCT3-203ENST00000368258 SALL2Q9Y467 1007 aaPredicted RBP16.48■□□□□ 0.23
CCT3-203ENST00000368258 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
CCT3-203ENST00000368258 MAGI3Q5TCQ9 1506 aa16.47■□□□□ 0.23
CCT3-203ENST00000368258 MBD5Q9P267 1494 aa16.46■□□□□ 0.23
CCT3-203ENST00000368258 NBPF8Q3BBV2 869 aa16.45■□□□□ 0.22
CCT3-203ENST00000368258 NUP160Q12769 1436 aa16.45■□□□□ 0.22
CCT3-203ENST00000368258 ROCK2O75116 1388 aaKnown RBP16.44■□□□□ 0.22
CCT3-203ENST00000368258 LRPPRCP42704 1394 aaKnown RBP16.44■□□□□ 0.22
CCT3-203ENST00000368258 IL27Q8NEV9 243 aa16.44■□□□□ 0.22
CCT3-203ENST00000368258 KTN1Q86UP2 1357 aaKnown RBP16.44■□□□□ 0.22
CCT3-203ENST00000368258 SHROOM2Q13796 1616 aa16.43■□□□□ 0.22
CCT3-203ENST00000368258 KIF14Q15058 1648 aa16.42■□□□□ 0.22
CCT3-203ENST00000368258 RRP7BPQ9NSQ0 103 aa16.42■□□□□ 0.22
CCT3-203ENST00000368258 BCORL1Q5H9F3 1711 aa16.42■□□□□ 0.22
CCT3-203ENST00000368258 PNISRQ8TF01 805 aaKnown RBP16.41■□□□□ 0.22
CCT3-203ENST00000368258 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
CCT3-203ENST00000368258 BACH2Q9BYV9 841 aa16.4■□□□□ 0.22
CCT3-203ENST00000368258 KDM5CP41229 1560 aa16.4■□□□□ 0.22
CCT3-203ENST00000368258 DNMT1P26358 1616 aaKnown RBP16.4■□□□□ 0.22
CCT3-203ENST00000368258 NEFMP07197 916 aa16.39■□□□□ 0.21
CCT3-203ENST00000368258 PDE4AP27815 886 aa16.38■□□□□ 0.21
CCT3-203ENST00000368258 RRP1P56182 461 aaKnown RBP16.38■□□□□ 0.21
CCT3-203ENST00000368258 BRD4O60885 1362 aaPredicted RBP16.37■□□□□ 0.21
CCT3-203ENST00000368258 DDRGK1Q96HY6 314 aa16.37■□□□□ 0.21
CCT3-203ENST00000368258 DAPK1P53355 1430 aa16.35■□□□□ 0.21
CCT3-203ENST00000368258 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
CCT3-203ENST00000368258 ZMYM4Q5VZL5 1548 aa16.35■□□□□ 0.21
CCT3-203ENST00000368258 USP47Q96K76 1375 aa16.34■□□□□ 0.21
CCT3-203ENST00000368258 E9PCH4 1651 aa16.34■□□□□ 0.21
CCT3-203ENST00000368258 PDE3BQ13370 1112 aa16.34■□□□□ 0.21
CCT3-203ENST00000368258 UBE2Q2Q8WVN8 375 aa16.34■□□□□ 0.21
CCT3-203ENST00000368258 INSRP06213 1382 aa16.34■□□□□ 0.21
CCT3-203ENST00000368258 KIF15Q9NS87 1388 aa16.34■□□□□ 0.21
CCT3-203ENST00000368258 UHRF1BP1Q6BDS2 1440 aa16.33■□□□□ 0.2
CCT3-203ENST00000368258 CHIC2Q9UKJ5 165 aa16.33■□□□□ 0.2
CCT3-203ENST00000368258 RALGAPBQ86X10 1494 aa16.31■□□□□ 0.2
CCT3-203ENST00000368258 PZPP20742 1482 aa16.31■□□□□ 0.2
CCT3-203ENST00000368258 ERCC6L2Q5T890 1561 aa16.31■□□□□ 0.2
CCT3-203ENST00000368258 GSE1Q14687 1217 aa16.29■□□□□ 0.2
CCT3-203ENST00000368258 RALBP1Q15311 655 aa16.29■□□□□ 0.2
CCT3-203ENST00000368258 TMC1Q8TDI8 760 aa16.29■□□□□ 0.2
CCT3-203ENST00000368258 ABCC5O15440 1437 aa16.29■□□□□ 0.2
CCT3-203ENST00000368258 MYBBP1AQ9BQG0 1328 aaKnown RBP16.29■□□□□ 0.2
CCT3-203ENST00000368258 EXOC6Q8TAG9 804 aa16.29■□□□□ 0.2
CCT3-203ENST00000368258 RCAN3Q9UKA8 241 aa16.29■□□□□ 0.2
CCT3-203ENST00000368258 LAS1LQ9Y4W2 734 aaKnown RBP16.29■□□□□ 0.2
CCT3-203ENST00000368258 ARHGEF12Q9NZN5 1544 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms