RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 PTPRMP28827 1452 aa24.17■■□□□ 1.46
CTSD-202ENST00000367196 POGZQ7Z3K3 1410 aa24.17■■□□□ 1.46
CTSD-202ENST00000367196 CASKIN1Q8WXD9 1431 aa24.17■■□□□ 1.46
CTSD-202ENST00000367196 PCF11O94913 1555 aaKnown RBP24.16■■□□□ 1.46
CTSD-202ENST00000367196 EFCAB2Q5VUJ9 269 aa24.16■■□□□ 1.46
CTSD-202ENST00000367196 SCAPERQ9BY12 1400 aa24.16■■□□□ 1.46
CTSD-202ENST00000367196 MADDQ8WXG6 1647 aa24.13■■□□□ 1.45
CTSD-202ENST00000367196 ARHGAP5Q13017 1502 aa24.13■■□□□ 1.45
CTSD-202ENST00000367196 FYCO1Q9BQS8 1478 aa24.12■■□□□ 1.45
CTSD-202ENST00000367196 YEATS2Q9ULM3 1422 aa24.09■■□□□ 1.45
CTSD-202ENST00000367196 ZNF518AQ6AHZ1 1483 aa24.08■■□□□ 1.45
CTSD-202ENST00000367196 RIMS1Q86UR5 1692 aaKnown RBP24.06■■□□□ 1.44
CTSD-202ENST00000367196 PREX2Q70Z35 1606 aa24.06■■□□□ 1.44
CTSD-202ENST00000367196 CDC42BPBQ9Y5S2 1711 aa24.03■■□□□ 1.44
CTSD-202ENST00000367196 KDM5CP41229 1560 aa24.03■■□□□ 1.44
CTSD-202ENST00000367196 C9orf84Q5VXU9 1444 aa24.02■■□□□ 1.44
CTSD-202ENST00000367196 ATP10AO60312 1499 aa24.02■■□□□ 1.44
CTSD-202ENST00000367196 SIGLEC1Q9BZZ2 1709 aa23.99■■□□□ 1.43
CTSD-202ENST00000367196 FER1L4A9Z1Z3 1794 aa23.99■■□□□ 1.43
CTSD-202ENST00000367196 ABCC1P33527 1531 aa23.96■■□□□ 1.43
CTSD-202ENST00000367196 CDC42BPAQ5VT25 1732 aa23.96■■□□□ 1.43
CTSD-202ENST00000367196 MYT1LQ9UL68 1186 aa23.94■■□□□ 1.42
CTSD-202ENST00000367196 ITSN2Q9NZM3 1697 aa23.94■■□□□ 1.42
CTSD-202ENST00000367196 REREQ9P2R6 1566 aa23.92■■□□□ 1.42
CTSD-202ENST00000367196 MLECQ14165 292 aa23.92■■□□□ 1.42
CTSD-202ENST00000367196 ARHGEF12Q9NZN5 1544 aa23.92■■□□□ 1.42
CTSD-202ENST00000367196 LMTK3Q96Q04 1460 aa23.92■■□□□ 1.42
CTSD-202ENST00000367196 MLH3Q9UHC1 1453 aa23.92■■□□□ 1.42
CTSD-202ENST00000367196 AFAP1Q8N556 730 aa23.91■■□□□ 1.42
CTSD-202ENST00000367196 DIP2CQ9Y2E4 1556 aa23.91■■□□□ 1.42
CTSD-202ENST00000367196 ABCA6Q8N139 1617 aa23.87■■□□□ 1.41
CTSD-202ENST00000367196 TRAPPC8Q9Y2L5 1435 aa23.85■■□□□ 1.41
CTSD-202ENST00000367196 ILDR1Q86SU0 546 aaPredicted RBP23.85■■□□□ 1.41
CTSD-202ENST00000367196 MTUS2Q5JR59 1369 aa23.85■■□□□ 1.41
CTSD-202ENST00000367196 PLPPR3Q6T4P5 718 aa23.84■■□□□ 1.41
CTSD-202ENST00000367196 GPATCH8Q9UKJ3 1502 aaKnown RBP23.84■■□□□ 1.41
CTSD-202ENST00000367196 PLEKHH2Q8IVE3 1493 aa23.83■■□□□ 1.41
CTSD-202ENST00000367196 CEP162Q5TB80 1403 aa23.83■■□□□ 1.4
CTSD-202ENST00000367196 SAMD9LQ8IVG5 1584 aa23.82■■□□□ 1.4
CTSD-202ENST00000367196 AGLP35573 1532 aa23.82■■□□□ 1.4
CTSD-202ENST00000367196 CCNB3Q8WWL7 1395 aa23.81■■□□□ 1.4
CTSD-202ENST00000367196 EHBP1L1Q8N3D4 1523 aa23.81■■□□□ 1.4
CTSD-202ENST00000367196 KIDINS220Q9ULH0 1771 aa23.8■■□□□ 1.4
CTSD-202ENST00000367196 SYCP2Q9BX26 1530 aa23.8■■□□□ 1.4
CTSD-202ENST00000367196 ZNF777Q9ULD5 760 aaPredicted RBP23.8■■□□□ 1.4
CTSD-202ENST00000367196 PREX1Q8TCU6 1659 aa23.79■■□□□ 1.4
CTSD-202ENST00000367196 CFDP1Q9UEE9 299 aaPredicted RBP23.78■■□□□ 1.4
CTSD-202ENST00000367196 KIAA1107Q9UPP5 1409 aa23.77■■□□□ 1.4
CTSD-202ENST00000367196 ESF1Q9H501 851 aaKnown RBP23.76■■□□□ 1.39
CTSD-202ENST00000367196 SPAG9O60271 1321 aaKnown RBP23.74■■□□□ 1.39
CTSD-202ENST00000367196 ATP7AQ04656 1500 aa23.72■■□□□ 1.39
CTSD-202ENST00000367196 TIAM1Q13009 1591 aa23.72■■□□□ 1.39
CTSD-202ENST00000367196 CNTLNQ9NXG0 1405 aa23.71■■□□□ 1.39
CTSD-202ENST00000367196 HSPA2P54652 639 aa23.71■■□□□ 1.39
CTSD-202ENST00000367196 SETD1BQ9UPS6 1966 aaKnown RBP23.71■■□□□ 1.39
CTSD-202ENST00000367196 INO80Q9ULG1 1556 aaPredicted RBP23.69■■□□□ 1.38
CTSD-202ENST00000367196 UHRF1BP1Q6BDS2 1440 aa23.69■■□□□ 1.38
CTSD-202ENST00000367196 HNRNPMP52272 730 aaKnown RBP eCLIP23.69■■□□□ 1.38
CTSD-202ENST00000367196 C3P01024 1663 aa23.67■■□□□ 1.38
CTSD-202ENST00000367196 SUPT6HQ7KZ85 1726 aaKnown RBP23.67■■□□□ 1.38
CTSD-202ENST00000367196 CEBPAP49715 358 aaPredicted RBP23.66■■□□□ 1.38
CTSD-202ENST00000367196 MROH2AA6NES4 1674 aa23.64■■□□□ 1.38
CTSD-202ENST00000367196 PLXNC1O60486 1568 aa23.63■■□□□ 1.37
CTSD-202ENST00000367196 FBXO41Q8TF61 875 aa23.63■■□□□ 1.37
CTSD-202ENST00000367196 ADGBQ8N7X0 1667 aa23.63■■□□□ 1.37
CTSD-202ENST00000367196 A2MP01023 1474 aa23.62■■□□□ 1.37
CTSD-202ENST00000367196 VPS8Q8N3P4 1428 aa23.6■■□□□ 1.37
CTSD-202ENST00000367196 NCOA2Q15596 1464 aa23.6■■□□□ 1.37
CTSD-202ENST00000367196 RTEL1-TNFRSF6BF6WH68 1400 aa23.58■■□□□ 1.36
CTSD-202ENST00000367196 MBD5Q9P267 1494 aa23.57■■□□□ 1.36
CTSD-202ENST00000367196 DMRT2Q9Y5R5 561 aa23.57■■□□□ 1.36
CTSD-202ENST00000367196 NPATQ14207 1427 aa23.56■■□□□ 1.36
CTSD-202ENST00000367196 ZNF644Q9H582 1327 aaPredicted RBP23.55■■□□□ 1.36
CTSD-202ENST00000367196 CCDC141Q6ZP82 1450 aa23.55■■□□□ 1.36
CTSD-202ENST00000367196 RSPH4AQ5TD94 716 aa23.54■■□□□ 1.36
CTSD-202ENST00000367196 CAMSAP2Q08AD1 1489 aa23.54■■□□□ 1.36
CTSD-202ENST00000367196 CLTCQ00610 1675 aaKnown RBP23.52■■□□□ 1.36
CTSD-202ENST00000367196 PPP6R1Q9UPN7 881 aa23.52■■□□□ 1.36
CTSD-202ENST00000367196 LRRC9Q6ZRR7 1453 aa23.51■■□□□ 1.35
CTSD-202ENST00000367196 STRCQ7RTU9 1775 aa23.51■■□□□ 1.35
CTSD-202ENST00000367196 ZMYM3Q14202 1370 aa23.51■■□□□ 1.35
CTSD-202ENST00000367196 MAP3K1Q13233 1512 aa23.5■■□□□ 1.35
CTSD-202ENST00000367196 LOC105371045A0A1W2PR82 267 aa23.49■■□□□ 1.35
CTSD-202ENST00000367196 GGT6Q6P531 493 aa23.48■■□□□ 1.35
CTSD-202ENST00000367196 ARHGEF5Q12774 1597 aa23.48■■□□□ 1.35
CTSD-202ENST00000367196 DHX29Q7Z478 1369 aaKnown RBP23.46■■□□□ 1.35
CTSD-202ENST00000367196 FAM135AQ9P2D6 1515 aa23.44■■□□□ 1.34
CTSD-202ENST00000367196 PTPRTO14522 1441 aa23.44■■□□□ 1.34
CTSD-202ENST00000367196 CERKQ8TCT0 537 aa23.43■■□□□ 1.34
CTSD-202ENST00000367196 ZNF142P52746 1687 aaPredicted RBP23.43■■□□□ 1.34
CTSD-202ENST00000367196 MYO3AQ8NEV4 1616 aa23.42■■□□□ 1.34
CTSD-202ENST00000367196 NCOA1Q15788 1441 aa23.42■■□□□ 1.34
CTSD-202ENST00000367196 TSPY4P0CV99 314 aa23.41■■□□□ 1.34
CTSD-202ENST00000367196 TSPY10P0CW01 314 aa23.41■■□□□ 1.34
CTSD-202ENST00000367196 PTPRKQ15262 1439 aa23.4■■□□□ 1.34
CTSD-202ENST00000367196 CAMSAP1Q5T5Y3 1602 aa23.39■■□□□ 1.33
CTSD-202ENST00000367196 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
CTSD-202ENST00000367196 MIA2Q96PC5 1412 aa23.38■■□□□ 1.33
CTSD-202ENST00000367196 CEP170BQ9Y4F5 1589 aaPredicted RBP23.37■■□□□ 1.33
CTSD-202ENST00000367196 MAST1Q9Y2H9 1570 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms