RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 NPM1P06748 294 aaKnown RBP eCLIP7.09□□□□□ -1.27
CDC42BPA-204ENST00000366767 NAP1L5Q96NT1 182 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-204ENST00000366767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.08□□□□□ -1.282e-6■□□□□ 11.1
CDC42BPA-204ENST00000366767 CDK11BP21127 795 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-204ENST00000366767 RALBP1Q15311 655 aa7.08□□□□□ -1.28
CDC42BPA-204ENST00000366767 PKD2Q13563 968 aa7.07□□□□□ -1.28
CDC42BPA-204ENST00000366767 JPH4Q96JJ6 628 aa7.07□□□□□ -1.28
CDC42BPA-204ENST00000366767 HECW1Q76N89 1606 aa7.07□□□□□ -1.28
CDC42BPA-204ENST00000366767 IFT140Q96RY7 1462 aa7.07□□□□□ -1.28
CDC42BPA-204ENST00000366767 CANXP27824 592 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-204ENST00000366767 TMF1P82094 1093 aa7.06□□□□□ -1.28
CDC42BPA-204ENST00000366767 PCF11O94913 1555 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-204ENST00000366767 NEFMP07197 916 aa7.06□□□□□ -1.28
CDC42BPA-204ENST00000366767 THOC2Q8NI27 1593 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-204ENST00000366767 SUPT6HQ7KZ85 1726 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-204ENST00000366767 MRC2Q9UBG0 1479 aa7.05□□□□□ -1.28
CDC42BPA-204ENST00000366767 TRIM44Q96DX7 344 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-204ENST00000366767 NUP155O75694 1391 aa7.05□□□□□ -1.28
CDC42BPA-204ENST00000366767 TSHZ2Q9NRE2 1034 aa7.05□□□□□ -1.28
CDC42BPA-204ENST00000366767 DCAF11Q8TEB1 546 aa7.05□□□□□ -1.28
CDC42BPA-204ENST00000366767 ROCK1Q13464 1354 aa7.05□□□□□ -1.28
CDC42BPA-204ENST00000366767 DEKP35659 375 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-204ENST00000366767 DDRGK1Q96HY6 314 aa7.04□□□□□ -1.28
CDC42BPA-204ENST00000366767 UPF2Q9HAU5 1272 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-204ENST00000366767 HSP90AA1P07900 732 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-204ENST00000366767 KNSTRNQ9Y448 316 aa7.04□□□□□ -1.28
CDC42BPA-204ENST00000366767 PRKRIP1Q9H875 184 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-204ENST00000366767 RBM19Q9Y4C8 960 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-204ENST00000366767 CNTLNQ9NXG0 1405 aa7.03□□□□□ -1.28
CDC42BPA-204ENST00000366767 PDE3BQ13370 1112 aa7.03□□□□□ -1.28
CDC42BPA-204ENST00000366767 STAC3Q96MF2 364 aa7.03□□□□□ -1.28
CDC42BPA-204ENST00000366767 AKNAQ7Z591 1439 aa7.03□□□□□ -1.28
CDC42BPA-204ENST00000366767 IRX6P78412 446 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-204ENST00000366767 KANK1Q14678 1352 aa7.03□□□□□ -1.28
CDC42BPA-204ENST00000366767 NUDCQ9Y266 331 aa7.03□□□□□ -1.28
CDC42BPA-204ENST00000366767 KTN1Q86UP2 1357 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-204ENST00000366767 NESP48681 1621 aa7.02□□□□□ -1.29
CDC42BPA-204ENST00000366767 NAIPQ13075 1403 aa7.02□□□□□ -1.29
CDC42BPA-204ENST00000366767 ZBED9Q6R2W3 1325 aa7.02□□□□□ -1.29
CDC42BPA-204ENST00000366767 RGL3Q3MIN7 710 aa7.02□□□□□ -1.29
CDC42BPA-204ENST00000366767 CCDC7Q96M83 1385 aa7.02□□□□□ -1.29
CDC42BPA-204ENST00000366767 EFCAB2Q5VUJ9 269 aa7.02□□□□□ -1.29
CDC42BPA-204ENST00000366767 KIF15Q9NS87 1388 aa7.02□□□□□ -1.29
CDC42BPA-204ENST00000366767 KIAA0586Q9BVV6 1533 aa7.02□□□□□ -1.29
CDC42BPA-204ENST00000366767 KCNH8Q96L42 1107 aa7.01□□□□□ -1.29
CDC42BPA-204ENST00000366767 NCLP19338 710 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-204ENST00000366767 FOXD1Q16676 465 aa7.01□□□□□ -1.29
CDC42BPA-204ENST00000366767 ZBTB4Q9P1Z0 1013 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-204ENST00000366767 PPM1GO15355 546 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-204ENST00000366767 EPRSP07814 1512 aaKnown RBP7□□□□□ -1.29
CDC42BPA-204ENST00000366767 TROQ12816 1431 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-204ENST00000366767 CHGAP10645 457 aaKnown RBP7□□□□□ -1.29
CDC42BPA-204ENST00000366767 PRDM2Q13029 1718 aa7□□□□□ -1.29
CDC42BPA-204ENST00000366767 IQGAP2Q13576 1575 aa7□□□□□ -1.29
CDC42BPA-204ENST00000366767 MYBBP1AQ9BQG0 1328 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-204ENST00000366767 WDR97A6NE52 1622 aa6.99□□□□□ -1.29
CDC42BPA-204ENST00000366767 NOP58Q9Y2X3 529 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-204ENST00000366767 SALL2Q9Y467 1007 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-204ENST00000366767 PTPRGP23470 1445 aa6.99□□□□□ -1.29
CDC42BPA-204ENST00000366767 CFAP43Q8NDM7 1665 aa6.99□□□□□ -1.29
CDC42BPA-204ENST00000366767 NLRP13Q86W25 1043 aa6.99□□□□□ -1.29
CDC42BPA-204ENST00000366767 DAPK1P53355 1430 aa6.99□□□□□ -1.29
CDC42BPA-204ENST00000366767 URB2Q14146 1524 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-204ENST00000366767 PTPN23Q9H3S7 1636 aa6.98□□□□□ -1.29
CDC42BPA-204ENST00000366767 AMER1Q5JTC6 1135 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-204ENST00000366767 CFAP53Q96M91 514 aa6.98□□□□□ -1.29
CDC42BPA-204ENST00000366767 ANKRD50Q9ULJ7 1429 aa6.98□□□□□ -1.29
CDC42BPA-204ENST00000366767 KIAA1107Q9UPP5 1409 aa6.98□□□□□ -1.29
CDC42BPA-204ENST00000366767 MAPKBP1O60336 1514 aa6.98□□□□□ -1.29
CDC42BPA-204ENST00000366767 USP47Q96K76 1375 aa6.98□□□□□ -1.29
CDC42BPA-204ENST00000366767 HNRNPMP52272 730 aaKnown RBP eCLIP6.98□□□□□ -1.295e-11■■■■■ 37.4
CDC42BPA-204ENST00000366767 WASHC2AQ641Q2 1341 aa6.98□□□□□ -1.29
CDC42BPA-204ENST00000366767 CCDC144AA2RUR9 1427 aa6.98□□□□□ -1.29
CDC42BPA-204ENST00000366767 TCERG1O14776 1098 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-204ENST00000366767 B4GALNT3Q6L9W6 998 aa6.97□□□□□ -1.29
CDC42BPA-204ENST00000366767 EIF3AQ14152 1382 aaKnown RBP6.96□□□□□ -1.29
CDC42BPA-204ENST00000366767 CTTNBP2Q8WZ74 1663 aa6.96□□□□□ -1.29
CDC42BPA-204ENST00000366767 WASHC2CQ9Y4E1 1318 aa6.96□□□□□ -1.29
CDC42BPA-204ENST00000366767 TCOF1Q13428 1488 aaKnown RBP6.96□□□□□ -1.29
CDC42BPA-204ENST00000366767 FANCIQ9NVI1 1328 aa6.96□□□□□ -1.3
CDC42BPA-204ENST00000366767 UGGT2Q9NYU1 1516 aa6.96□□□□□ -1.3
CDC42BPA-204ENST00000366767 MS4A1P11836 297 aa6.96□□□□□ -1.3
CDC42BPA-204ENST00000366767 SYNJ2O15056 1496 aa6.96□□□□□ -1.3
CDC42BPA-204ENST00000366767 RCAN3Q9UKA8 241 aa6.95□□□□□ -1.3
CDC42BPA-204ENST00000366767 NGEFQ8N5V2 710 aa6.95□□□□□ -1.3
CDC42BPA-204ENST00000366767 KIF7Q2M1P5 1343 aa6.95□□□□□ -1.3
CDC42BPA-204ENST00000366767 PLEKHH2Q8IVE3 1493 aa6.95□□□□□ -1.3
CDC42BPA-204ENST00000366767 PNNQ9H307 717 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-204ENST00000366767 BECN1Q14457 450 aa6.95□□□□□ -1.3
CDC42BPA-204ENST00000366767 SNAPC4Q5SXM2 1469 aa6.94□□□□□ -1.3
CDC42BPA-204ENST00000366767 MAGI1Q96QZ7 1491 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-204ENST00000366767 BRD4O60885 1362 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-204ENST00000366767 DNTTIP2Q5QJE6 756 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-204ENST00000366767 CC2D1BQ5T0F9 858 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-204ENST00000366767 STAG3Q9UJ98 1225 aa6.94□□□□□ -1.3
CDC42BPA-204ENST00000366767 ANKRD30BQ9BXX2 1392 aa6.94□□□□□ -1.3
CDC42BPA-204ENST00000366767 ST20-MTHFSA0A0A6YYL1 179 aa6.93□□□□□ -1.3
CDC42BPA-204ENST00000366767 LAS1LQ9Y4W2 734 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-204ENST00000366767 ABCC5O15440 1437 aa6.93□□□□□ -1.3
CDC42BPA-204ENST00000366767 SPAG9O60271 1321 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms