RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 CEP162Q5TB80 1403 aa38.06■■■■□ 3.68
SHC1-201ENST00000366442 MAGI2Q86UL8 1455 aa38.06■■■■□ 3.68
SHC1-201ENST00000366442 ARHGAP5Q13017 1502 aa38.06■■■■□ 3.68
SHC1-201ENST00000366442 ZFYVE16Q7Z3T8 1539 aa38■■■■□ 3.67
SHC1-201ENST00000366442 CDC42BPBQ9Y5S2 1711 aa38■■■■□ 3.67
SHC1-201ENST00000366442 PREX2Q70Z35 1606 aa37.98■■■■□ 3.67
SHC1-201ENST00000366442 ADAMTSL3P82987 1691 aa37.98■■■■□ 3.67
SHC1-201ENST00000366442 BCORL1Q5H9F3 1711 aa37.95■■■■□ 3.67
SHC1-201ENST00000366442 YEATS2Q9ULM3 1422 aa37.95■■■■□ 3.67
SHC1-201ENST00000366442 ARID4BQ4LE39 1312 aaPredicted RBP37.94■■■■□ 3.66
SHC1-201ENST00000366442 ZNF518AQ6AHZ1 1483 aa37.93■■■■□ 3.66
SHC1-201ENST00000366442 CDC42BPAQ5VT25 1732 aa37.9■■■■□ 3.66
SHC1-201ENST00000366442 KDM5CP41229 1560 aa37.87■■■■□ 3.65
SHC1-201ENST00000366442 ABCC1P33527 1531 aa37.84■■■■□ 3.65
SHC1-201ENST00000366442 LOC105371045A0A1W2PR82 267 aa37.83■■■■□ 3.65
SHC1-201ENST00000366442 PTPRMP28827 1452 aa37.83■■■■□ 3.65
SHC1-201ENST00000366442 MTUS2Q5JR59 1369 aa37.82■■■■□ 3.65
SHC1-201ENST00000366442 AFAP1Q8N556 730 aa37.82■■■■□ 3.64
SHC1-201ENST00000366442 ATP10AO60312 1499 aa37.81■■■■□ 3.64
SHC1-201ENST00000366442 GPATCH8Q9UKJ3 1502 aaKnown RBP37.81■■■■□ 3.64
SHC1-201ENST00000366442 MADDQ8WXG6 1647 aa37.8■■■■□ 3.64
SHC1-201ENST00000366442 SIGLEC1Q9BZZ2 1709 aa37.8■■■■□ 3.64
SHC1-201ENST00000366442 C9orf84Q5VXU9 1444 aa37.78■■■■□ 3.64
SHC1-201ENST00000366442 ARHGEF12Q9NZN5 1544 aa37.77■■■■□ 3.64
SHC1-201ENST00000366442 ITSN2Q9NZM3 1697 aa37.77■■■■□ 3.64
SHC1-201ENST00000366442 HECW2Q9P2P5 1572 aa37.76■■■■□ 3.63
SHC1-201ENST00000366442 EHBP1L1Q8N3D4 1523 aa37.75■■■■□ 3.63
SHC1-201ENST00000366442 MLH3Q9UHC1 1453 aa37.74■■■■□ 3.63
SHC1-201ENST00000366442 TRAPPC8Q9Y2L5 1435 aa37.73■■■■□ 3.63
SHC1-201ENST00000366442 CCNB3Q8WWL7 1395 aa37.72■■■■□ 3.63
SHC1-201ENST00000366442 SAMD9LQ8IVG5 1584 aa37.7■■■■□ 3.63
SHC1-201ENST00000366442 VPS8Q8N3P4 1428 aa37.67■■■■□ 3.62
SHC1-201ENST00000366442 DIP2CQ9Y2E4 1556 aa37.67■■■■□ 3.62
SHC1-201ENST00000366442 RIMS1Q86UR5 1692 aaKnown RBP37.66■■■■□ 3.62
SHC1-201ENST00000366442 CFDP1Q9UEE9 299 aaPredicted RBP37.66■■■■□ 3.62
SHC1-201ENST00000366442 ZNF777Q9ULD5 760 aaPredicted RBP37.66■■■■□ 3.62
SHC1-201ENST00000366442 REREQ9P2R6 1566 aa37.65■■■■□ 3.62
SHC1-201ENST00000366442 MYT1LQ9UL68 1186 aa37.65■■■■□ 3.62
SHC1-201ENST00000366442 PLEKHH2Q8IVE3 1493 aa37.64■■■■□ 3.62
SHC1-201ENST00000366442 KIAA1107Q9UPP5 1409 aa37.63■■■■□ 3.61
SHC1-201ENST00000366442 SYCP2Q9BX26 1530 aa37.62■■■■□ 3.61
SHC1-201ENST00000366442 ABCA6Q8N139 1617 aa37.61■■■■□ 3.61
SHC1-201ENST00000366442 TIAM1Q13009 1591 aa37.61■■■■□ 3.61
SHC1-201ENST00000366442 MLECQ14165 292 aa37.59■■■■□ 3.61
SHC1-201ENST00000366442 FER1L4A9Z1Z3 1794 aa37.57■■■■□ 3.61
SHC1-201ENST00000366442 KIDINS220Q9ULH0 1771 aa37.57■■■■□ 3.61
SHC1-201ENST00000366442 HNRNPMP52272 730 aaKnown RBP eCLIP37.54■■■■□ 3.6
SHC1-201ENST00000366442 SUPT6HQ7KZ85 1726 aaKnown RBP37.52■■■■□ 3.6
SHC1-201ENST00000366442 AGLP35573 1532 aa37.51■■■■□ 3.6
SHC1-201ENST00000366442 NCOA2Q15596 1464 aa37.5■■■■□ 3.59
SHC1-201ENST00000366442 SPAG9O60271 1321 aaKnown RBP37.49■■■■□ 3.59
SHC1-201ENST00000366442 MAP3K1Q13233 1512 aa37.46■■■■□ 3.59
SHC1-201ENST00000366442 LRRC9Q6ZRR7 1453 aa37.44■■■■□ 3.58
SHC1-201ENST00000366442 ATP7AQ04656 1500 aa37.43■■■■□ 3.58
SHC1-201ENST00000366442 INO80Q9ULG1 1556 aaPredicted RBP37.42■■■■□ 3.58
SHC1-201ENST00000366442 ZNF644Q9H582 1327 aaPredicted RBP37.42■■■■□ 3.58
SHC1-201ENST00000366442 LMTK3Q96Q04 1460 aa37.4■■■■□ 3.58
SHC1-201ENST00000366442 MBD5Q9P267 1494 aa37.4■■■■□ 3.58
SHC1-201ENST00000366442 PLPPR3Q6T4P5 718 aa37.35■■■■□ 3.57
SHC1-201ENST00000366442 CAMSAP2Q08AD1 1489 aa37.31■■■■□ 3.56
SHC1-201ENST00000366442 PLXNC1O60486 1568 aa37.29■■■■□ 3.56
SHC1-201ENST00000366442 RTEL1-TNFRSF6BF6WH68 1400 aa37.29■■■■□ 3.56
SHC1-201ENST00000366442 A2MP01023 1474 aa37.28■■■■□ 3.56
SHC1-201ENST00000366442 KANK4Q5T7N3 995 aaPredicted RBP37.28■■■■□ 3.56
SHC1-201ENST00000366442 RSPH4AQ5TD94 716 aa37.27■■■■□ 3.56
SHC1-201ENST00000366442 CCDC141Q6ZP82 1450 aa37.26■■■■□ 3.55
SHC1-201ENST00000366442 ESF1Q9H501 851 aaKnown RBP37.25■■■■□ 3.55
SHC1-201ENST00000366442 ADGBQ8N7X0 1667 aa37.25■■■■□ 3.55
SHC1-201ENST00000366442 CEBPAP49715 358 aaPredicted RBP37.24■■■■□ 3.55
SHC1-201ENST00000366442 CNTLNQ9NXG0 1405 aa37.24■■■■□ 3.55
SHC1-201ENST00000366442 PREX1Q8TCU6 1659 aa37.19■■■■□ 3.54
SHC1-201ENST00000366442 ARHGEF5Q12774 1597 aa37.19■■■■□ 3.54
SHC1-201ENST00000366442 C3P01024 1663 aa37.18■■■■□ 3.54
SHC1-201ENST00000366442 APLP2Q06481 763 aa37.17■■■■□ 3.54
SHC1-201ENST00000366442 SETD1BQ9UPS6 1966 aaKnown RBP37.17■■■■□ 3.54
SHC1-201ENST00000366442 MYOM3Q5VTT5 1437 aa37.15■■■■□ 3.54
SHC1-201ENST00000366442 MIA2Q96PC5 1412 aa37.15■■■■□ 3.54
SHC1-201ENST00000366442 HSPA2P54652 639 aa37.14■■■■□ 3.54
SHC1-201ENST00000366442 MROH2AA6NES4 1674 aa37.12■■■■□ 3.53
SHC1-201ENST00000366442 DHX29Q7Z478 1369 aaKnown RBP37.11■■■■□ 3.53
SHC1-201ENST00000366442 PPP6R1Q9UPN7 881 aa37.08■■■■□ 3.53
SHC1-201ENST00000366442 UHRF1BP1Q6BDS2 1440 aa37.08■■■■□ 3.53
SHC1-201ENST00000366442 TSPY4P0CV99 314 aa37.07■■■■□ 3.52
SHC1-201ENST00000366442 TSPY10P0CW01 314 aa37.07■■■■□ 3.52
SHC1-201ENST00000366442 GGT6Q6P531 493 aa37.04■■■■□ 3.52
SHC1-201ENST00000366442 ZMYM3Q14202 1370 aa37.04■■■■□ 3.52
SHC1-201ENST00000366442 NPATQ14207 1427 aa37.02■■■■□ 3.52
SHC1-201ENST00000366442 CLTCQ00610 1675 aaKnown RBP37.01■■■■□ 3.52
SHC1-201ENST00000366442 MAST1Q9Y2H9 1570 aa37■■■■□ 3.51
SHC1-201ENST00000366442 KIF3BO15066 747 aa36.93■■■■□ 3.5
SHC1-201ENST00000366442 FAM135AQ9P2D6 1515 aa36.91■■■■□ 3.5
SHC1-201ENST00000366442 PTPN23Q9H3S7 1636 aa36.9■■■■□ 3.5
SHC1-201ENST00000366442 ILDR1Q86SU0 546 aaPredicted RBP36.89■■■■□ 3.5
SHC1-201ENST00000366442 PTPRKQ15262 1439 aa36.87■■■■□ 3.49
SHC1-201ENST00000366442 FGD6Q6ZV73 1430 aa36.86■■■■□ 3.49
SHC1-201ENST00000366442 STRCQ7RTU9 1775 aa36.83■■■■□ 3.49
SHC1-201ENST00000366442 TCOF1Q13428 1488 aaKnown RBP36.83■■■■□ 3.49
SHC1-201ENST00000366442 SHANK2Q9UPX8 1470 aa36.83■■■■□ 3.49
SHC1-201ENST00000366442 KDM5DQ9BY66 1539 aa36.83■■■■□ 3.49
SHC1-201ENST00000366442 ABCC5O15440 1437 aa36.8■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms