RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 ZMYM4Q5VZL5 1548 aa16.75■□□□□ 0.27
YBX3-203ENST00000366286 ARHGAP5Q13017 1502 aa16.73■□□□□ 0.27
YBX3-203ENST00000366286 POGZQ7Z3K3 1410 aa16.7■□□□□ 0.26
YBX3-203ENST00000366286 ZFYVE16Q7Z3T8 1539 aa16.69■□□□□ 0.26
YBX3-203ENST00000366286 ITSN2Q9NZM3 1697 aa16.69■□□□□ 0.26
YBX3-203ENST00000366286 SCAPERQ9BY12 1400 aa16.68■□□□□ 0.26
YBX3-203ENST00000366286 BCORL1Q5H9F3 1711 aa16.67■□□□□ 0.26
YBX3-203ENST00000366286 SIGLEC1Q9BZZ2 1709 aa16.67■□□□□ 0.26
YBX3-203ENST00000366286 LOC105371045A0A1W2PR82 267 aa16.67■□□□□ 0.26
YBX3-203ENST00000366286 ABCC1P33527 1531 aa16.66■□□□□ 0.26
YBX3-203ENST00000366286 ADAMTSL3P82987 1691 aa16.66■□□□□ 0.26
YBX3-203ENST00000366286 EHBP1L1Q8N3D4 1523 aa16.65■□□□□ 0.26
YBX3-203ENST00000366286 KDM5CP41229 1560 aa16.65■□□□□ 0.26
YBX3-203ENST00000366286 EFCAB2Q5VUJ9 269 aa16.64■□□□□ 0.25
YBX3-203ENST00000366286 MAGI2Q86UL8 1455 aa16.63■□□□□ 0.25
YBX3-203ENST00000366286 SAMD9LQ8IVG5 1584 aa16.63■□□□□ 0.25
YBX3-203ENST00000366286 HECW2Q9P2P5 1572 aa16.63■□□□□ 0.25
YBX3-203ENST00000366286 YEATS2Q9ULM3 1422 aa16.62■□□□□ 0.25
YBX3-203ENST00000366286 ZNF518AQ6AHZ1 1483 aa16.62■□□□□ 0.25
YBX3-203ENST00000366286 MTUS2Q5JR59 1369 aa16.62■□□□□ 0.25
YBX3-203ENST00000366286 TIAM1Q13009 1591 aa16.61■□□□□ 0.25
YBX3-203ENST00000366286 MADDQ8WXG6 1647 aa16.61■□□□□ 0.25
YBX3-203ENST00000366286 VPS8Q8N3P4 1428 aa16.61■□□□□ 0.25
YBX3-203ENST00000366286 ARHGEF12Q9NZN5 1544 aa16.6■□□□□ 0.25
YBX3-203ENST00000366286 SUPT6HQ7KZ85 1726 aaKnown RBP16.59■□□□□ 0.25
YBX3-203ENST00000366286 GPATCH8Q9UKJ3 1502 aaKnown RBP16.59■□□□□ 0.25
YBX3-203ENST00000366286 ABCA6Q8N139 1617 aa16.59■□□□□ 0.25
YBX3-203ENST00000366286 SYCP2Q9BX26 1530 aa16.58■□□□□ 0.24
YBX3-203ENST00000366286 RIMS1Q86UR5 1692 aaKnown RBP16.58■□□□□ 0.24
YBX3-203ENST00000366286 DIP2CQ9Y2E4 1556 aa16.57■□□□□ 0.24
YBX3-203ENST00000366286 FER1L4A9Z1Z3 1794 aa16.56■□□□□ 0.24
YBX3-203ENST00000366286 KIDINS220Q9ULH0 1771 aa16.56■□□□□ 0.24
YBX3-203ENST00000366286 C9orf84Q5VXU9 1444 aa16.54■□□□□ 0.24
YBX3-203ENST00000366286 TRAPPC8Q9Y2L5 1435 aa16.54■□□□□ 0.24
YBX3-203ENST00000366286 CCNB3Q8WWL7 1395 aa16.54■□□□□ 0.24
YBX3-203ENST00000366286 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
YBX3-203ENST00000366286 ATP10AO60312 1499 aa16.53■□□□□ 0.24
YBX3-203ENST00000366286 REREQ9P2R6 1566 aa16.52■□□□□ 0.24
YBX3-203ENST00000366286 AFAP1Q8N556 730 aa16.52■□□□□ 0.24
YBX3-203ENST00000366286 PTPRMP28827 1452 aa16.52■□□□□ 0.23
YBX3-203ENST00000366286 MLH3Q9UHC1 1453 aa16.52■□□□□ 0.23
YBX3-203ENST00000366286 NCOA2Q15596 1464 aa16.51■□□□□ 0.23
YBX3-203ENST00000366286 INO80Q9ULG1 1556 aaPredicted RBP16.5■□□□□ 0.23
YBX3-203ENST00000366286 PLEKHH2Q8IVE3 1493 aa16.49■□□□□ 0.23
YBX3-203ENST00000366286 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
YBX3-203ENST00000366286 MAP3K1Q13233 1512 aa16.49■□□□□ 0.23
YBX3-203ENST00000366286 LRRC9Q6ZRR7 1453 aa16.48■□□□□ 0.23
YBX3-203ENST00000366286 KIAA1107Q9UPP5 1409 aa16.47■□□□□ 0.23
YBX3-203ENST00000366286 ATP7AQ04656 1500 aa16.47■□□□□ 0.23
YBX3-203ENST00000366286 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
YBX3-203ENST00000366286 MYT1LQ9UL68 1186 aa16.45■□□□□ 0.22
YBX3-203ENST00000366286 AGLP35573 1532 aa16.44■□□□□ 0.22
YBX3-203ENST00000366286 ADGBQ8N7X0 1667 aa16.43■□□□□ 0.22
YBX3-203ENST00000366286 CAMSAP2Q08AD1 1489 aa16.43■□□□□ 0.22
YBX3-203ENST00000366286 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.22
YBX3-203ENST00000366286 PLXNC1O60486 1568 aa16.42■□□□□ 0.22
YBX3-203ENST00000366286 MBD5Q9P267 1494 aa16.42■□□□□ 0.22
YBX3-203ENST00000366286 MLECQ14165 292 aa16.41■□□□□ 0.22
YBX3-203ENST00000366286 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
YBX3-203ENST00000366286 SPAG9O60271 1321 aaKnown RBP16.4■□□□□ 0.22
YBX3-203ENST00000366286 KANK4Q5T7N3 995 aaPredicted RBP16.38■□□□□ 0.21
YBX3-203ENST00000366286 ARHGEF5Q12774 1597 aa16.38■□□□□ 0.21
YBX3-203ENST00000366286 C3P01024 1663 aa16.37■□□□□ 0.21
YBX3-203ENST00000366286 CCDC141Q6ZP82 1450 aa16.37■□□□□ 0.21
YBX3-203ENST00000366286 PREX1Q8TCU6 1659 aa16.35■□□□□ 0.21
YBX3-203ENST00000366286 MYOM3Q5VTT5 1437 aa16.35■□□□□ 0.21
YBX3-203ENST00000366286 A2MP01023 1474 aa16.35■□□□□ 0.21
YBX3-203ENST00000366286 LMTK3Q96Q04 1460 aa16.35■□□□□ 0.21
YBX3-203ENST00000366286 MROH2AA6NES4 1674 aa16.34■□□□□ 0.21
YBX3-203ENST00000366286 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
YBX3-203ENST00000366286 RTEL1-TNFRSF6BF6WH68 1400 aa16.33■□□□□ 0.2
YBX3-203ENST00000366286 CROCC2H7BZ55 1655 aa16.33■□□□□ 0.2
YBX3-203ENST00000366286 CLTCQ00610 1675 aaKnown RBP16.32■□□□□ 0.2
YBX3-203ENST00000366286 PTPN23Q9H3S7 1636 aa16.31■□□□□ 0.2
YBX3-203ENST00000366286 MAST1Q9Y2H9 1570 aa16.31■□□□□ 0.2
YBX3-203ENST00000366286 MIA2Q96PC5 1412 aa16.3■□□□□ 0.2
YBX3-203ENST00000366286 APLP2Q06481 763 aa16.3■□□□□ 0.2
YBX3-203ENST00000366286 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
YBX3-203ENST00000366286 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
YBX3-203ENST00000366286 CEBPAP49715 358 aaPredicted RBP16.25■□□□□ 0.19
YBX3-203ENST00000366286 DNMT1P26358 1616 aaKnown RBP16.25■□□□□ 0.19
YBX3-203ENST00000366286 RSPH4AQ5TD94 716 aa16.24■□□□□ 0.19
YBX3-203ENST00000366286 FGD6Q6ZV73 1430 aa16.23■□□□□ 0.19
YBX3-203ENST00000366286 ESF1Q9H501 851 aaKnown RBP16.23■□□□□ 0.19
YBX3-203ENST00000366286 DHX29Q7Z478 1369 aaKnown RBP16.23■□□□□ 0.19
YBX3-203ENST00000366286 EIF2AK4Q9P2K8 1649 aaKnown RBP16.23■□□□□ 0.19
YBX3-203ENST00000366286 TCOF1Q13428 1488 aaKnown RBP16.22■□□□□ 0.19
YBX3-203ENST00000366286 RNF17Q9BXT8 1623 aaKnown RBP16.22■□□□□ 0.19
YBX3-203ENST00000366286 SHANK2Q9UPX8 1470 aa16.21■□□□□ 0.19
YBX3-203ENST00000366286 MYO3AQ8NEV4 1616 aa16.2■□□□□ 0.18
YBX3-203ENST00000366286 UHRF1BP1Q6BDS2 1440 aa16.19■□□□□ 0.18
YBX3-203ENST00000366286 FAM135AQ9P2D6 1515 aa16.19■□□□□ 0.18
YBX3-203ENST00000366286 ZNF142P52746 1687 aaPredicted RBP16.19■□□□□ 0.18
YBX3-203ENST00000366286 TSPY4P0CV99 314 aa16.19■□□□□ 0.18
YBX3-203ENST00000366286 TSPY10P0CW01 314 aa16.19■□□□□ 0.18
YBX3-203ENST00000366286 HSPA2P54652 639 aa16.19■□□□□ 0.18
YBX3-203ENST00000366286 KDM5DQ9BY66 1539 aa16.19■□□□□ 0.18
YBX3-203ENST00000366286 GGT6Q6P531 493 aa16.18■□□□□ 0.18
YBX3-203ENST00000366286 DAPK1P53355 1430 aa16.18■□□□□ 0.18
YBX3-203ENST00000366286 STRCQ7RTU9 1775 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms