RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 PLA2G2EQ9NZK7 142 aa6.77□□□□□ -1.33
MIR539-201ENST00000365690 FBXO3Q9UK99 471 aa6.76□□□□□ -1.33
MIR539-201ENST00000365690 AXIN2Q9Y2T1 843 aa6.71□□□□□ -1.34
MIR539-201ENST00000365690 IFNLR1Q8IU57 520 aaPredicted RBP6.7□□□□□ -1.34
MIR539-201ENST00000365690 HCSTQ9UBK5 93 aa6.69□□□□□ -1.34
MIR539-201ENST00000365690 CIZ1Q9ULV3 898 aaPredicted RBP6.69□□□□□ -1.34
MIR539-201ENST00000365690 PHF8Q9UPP1 1060 aa6.68□□□□□ -1.34
MIR539-201ENST00000365690 NUDT7P0C024 238 aa6.66□□□□□ -1.34
MIR539-201ENST00000365690 PBX2P40425 430 aa6.66□□□□□ -1.34
MIR539-201ENST00000365690 SPOCK2Q92563 424 aa6.66□□□□□ -1.34
MIR539-201ENST00000365690 LHX6Q9UPM6 363 aa6.66□□□□□ -1.34
MIR539-201ENST00000365690 KIF3CO14782 793 aa6.65□□□□□ -1.34
MIR539-201ENST00000365690 SOX12O15370 315 aa6.65□□□□□ -1.34
MIR539-201ENST00000365690 ADGRD1Q6QNK2 874 aa6.63□□□□□ -1.35
MIR539-201ENST00000365690 RNF25Q96BH1 459 aaPredicted RBP6.63□□□□□ -1.35
MIR539-201ENST00000365690 HRO43593 1189 aa6.62□□□□□ -1.35
MIR539-201ENST00000365690 FBXO22Q8NEZ5 403 aa6.61□□□□□ -1.35
MIR539-201ENST00000365690 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.6□□□□□ -1.35
MIR539-201ENST00000365690 C2orf72A6NCS6 295 aa6.6□□□□□ -1.35
MIR539-201ENST00000365690 ZFP91Q96JP5 570 aaPredicted RBP6.6□□□□□ -1.35
MIR539-201ENST00000365690 DMRTA1Q5VZB9 504 aa6.59□□□□□ -1.35
MIR539-201ENST00000365690 PCDHGA4Q9Y5G9 962 aa6.59□□□□□ -1.35
MIR539-201ENST00000365690 KDM4FA0A1W2PPD8 638 aa6.58□□□□□ -1.36
MIR539-201ENST00000365690 ARHGAP33O14559 1287 aa6.57□□□□□ -1.36
MIR539-201ENST00000365690 SLC34A2O95436 690 aa6.57□□□□□ -1.36
MIR539-201ENST00000365690 TK2O00142 265 aa6.55□□□□□ -1.36
MIR539-201ENST00000365690 PSEN2P49810 448 aa6.55□□□□□ -1.36
MIR539-201ENST00000365690 RIOK3O14730 519 aaKnown RBP6.54□□□□□ -1.36
MIR539-201ENST00000365690 KCTD12Q96CX2 325 aaKnown RBP6.54□□□□□ -1.36
MIR539-201ENST00000365690 TRIM41Q8WV44 630 aa6.53□□□□□ -1.36
MIR539-201ENST00000365690 NLRP6P59044 892 aa6.52□□□□□ -1.37
MIR539-201ENST00000365690 MFRPQ9BY79 579 aa6.52□□□□□ -1.37
MIR539-201ENST00000365690 VGFO15240 615 aaPredicted RBP6.51□□□□□ -1.37
MIR539-201ENST00000365690 RGS20O76081 388 aa6.51□□□□□ -1.37
MIR539-201ENST00000365690 IRX2Q9BZI1 471 aaPredicted RBP6.51□□□□□ -1.37
MIR539-201ENST00000365690 IFFO2Q5TF58 517 aa6.5□□□□□ -1.37
MIR539-201ENST00000365690 A0A0G2JS52 829 aa6.48□□□□□ -1.37
MIR539-201ENST00000365690 PTPN5P54829 565 aa6.46□□□□□ -1.38
MIR539-201ENST00000365690 PSDA5PKW4 1024 aaPredicted RBP6.45□□□□□ -1.38
MIR539-201ENST00000365690 BCL11BQ9C0K0 894 aaPredicted RBP6.45□□□□□ -1.38
MIR539-201ENST00000365690 PTCD2Q8WV60 388 aaKnown RBP6.44□□□□□ -1.38
MIR539-201ENST00000365690 VPS9D1Q9Y2B5 631 aa6.44□□□□□ -1.38
MIR539-201ENST00000365690 LCE2BO14633 110 aa6.43□□□□□ -1.38
MIR539-201ENST00000365690 PPP1R37O75864 691 aa6.41□□□□□ -1.38
MIR539-201ENST00000365690 THSD4Q6ZMP0 1018 aa6.41□□□□□ -1.38
MIR539-201ENST00000365690 TMC2Q8TDI7 906 aa6.41□□□□□ -1.38
MIR539-201ENST00000365690 BHMG1C9JSJ3 638 aaPredicted RBP6.4□□□□□ -1.38
MIR539-201ENST00000365690 KCNK17Q96T54 332 aa6.4□□□□□ -1.38
MIR539-201ENST00000365690 PPP4R3BQ5MIZ7 849 aa6.39□□□□□ -1.39
MIR539-201ENST00000365690 STK24Q9Y6E0 443 aa6.39□□□□□ -1.39
MIR539-201ENST00000365690 STAC3Q96MF2 364 aa6.36□□□□□ -1.39
MIR539-201ENST00000365690 SLC4A5Q9BY07 1137 aa6.36□□□□□ -1.39
MIR539-201ENST00000365690 FOXK1P85037 733 aa6.35□□□□□ -1.39
MIR539-201ENST00000365690 Q6ZNB5 142 aa6.35□□□□□ -1.39
MIR539-201ENST00000365690 PLPP6Q8IY26 295 aa6.35□□□□□ -1.39
MIR539-201ENST00000365690 STK25O00506 426 aa6.32□□□□□ -1.4
MIR539-201ENST00000365690 DSG2Q14126 1118 aa6.32□□□□□ -1.4
MIR539-201ENST00000365690 WNT2BQ93097 391 aa6.32□□□□□ -1.4
MIR539-201ENST00000365690 ZBED2Q9BTP6 218 aa6.32□□□□□ -1.4
MIR539-201ENST00000365690 BCL2L12Q9HB09 334 aa6.32□□□□□ -1.4
MIR539-201ENST00000365690 ITGBL1O95965 494 aaPredicted RBP6.31□□□□□ -1.4
MIR539-201ENST00000365690 OXER1Q8TDS5 423 aa6.29□□□□□ -1.4
MIR539-201ENST00000365690 GPHNQ9NQX3 736 aaPredicted RBP6.29□□□□□ -1.4
MIR539-201ENST00000365690 FOSBP53539 338 aa6.28□□□□□ -1.4
MIR539-201ENST00000365690 ZNF454Q8N9F8 522 aa6.28□□□□□ -1.4
MIR539-201ENST00000365690 MRPL50Q8N5N7 158 aaKnown RBP6.27□□□□□ -1.41
MIR539-201ENST00000365690 KCNH8Q96L42 1107 aa6.26□□□□□ -1.41
MIR539-201ENST00000365690 TBC1D12O60347 775 aa6.25□□□□□ -1.41
MIR539-201ENST00000365690 GOLGA8CPA6NN73 597 aa6.24□□□□□ -1.41
MIR539-201ENST00000365690 TRAF7Q6Q0C0 670 aa6.24□□□□□ -1.41
MIR539-201ENST00000365690 ADAM33Q9BZ11 813 aa6.24□□□□□ -1.41
MIR539-201ENST00000365690 TAOK2Q9UL54 1235 aa6.24□□□□□ -1.41
MIR539-201ENST00000365690 PTPREP23469 700 aa6.23□□□□□ -1.41
MIR539-201ENST00000365690 UPF1Q92900 1129 aaKnown RBP eCLIP6.23□□□□□ -1.41
MIR539-201ENST00000365690 BCAMP50895 628 aa6.22□□□□□ -1.41
MIR539-201ENST00000365690 ANO8Q9HCE9 1232 aaPredicted RBP6.22□□□□□ -1.41
MIR539-201ENST00000365690 RGL2O15211 777 aa6.21□□□□□ -1.42
MIR539-201ENST00000365690 PROX2Q3B8N5 592 aa6.2□□□□□ -1.42
MIR539-201ENST00000365690 NBPF3Q9H094 633 aa6.2□□□□□ -1.42
MIR539-201ENST00000365690 GFRA3O60609 400 aa6.19□□□□□ -1.42
MIR539-201ENST00000365690 SOWAHBA6NEL2 793 aa6.18□□□□□ -1.42
MIR539-201ENST00000365690 LAPTM4AQ15012 233 aa6.18□□□□□ -1.42
MIR539-201ENST00000365690 ZDHHC16Q969W1 377 aa6.18□□□□□ -1.42
MIR539-201ENST00000365690 JPH4Q96JJ6 628 aa6.18□□□□□ -1.42
MIR539-201ENST00000365690 WBP1LQ9NX94 342 aa6.18□□□□□ -1.42
MIR539-201ENST00000365690 COL9A1P20849 921 aa6.17□□□□□ -1.42
MIR539-201ENST00000365690 KCNC4Q03721 635 aa6.17□□□□□ -1.42
MIR539-201ENST00000365690 ANKK1Q8NFD2 765 aa6.17□□□□□ -1.42
MIR539-201ENST00000365690 RABGEF1Q9UJ41 708 aa6.17□□□□□ -1.42
MIR539-201ENST00000365690 CRISPLD2Q9H0B8 497 aa6.16□□□□□ -1.42
MIR539-201ENST00000365690 ECM2O94769 699 aaPredicted RBP6.15□□□□□ -1.42
MIR539-201ENST00000365690 PKD2Q13563 968 aa6.15□□□□□ -1.42
MIR539-201ENST00000365690 ZNF775Q96BV0 537 aaPredicted RBP6.15□□□□□ -1.42
MIR539-201ENST00000365690 PPP1R3GB7ZBB8 358 aa6.13□□□□□ -1.43
MIR539-201ENST00000365690 NRG2O14511 850 aaPredicted RBP6.13□□□□□ -1.43
MIR539-201ENST00000365690 EVI5O60447 810 aa6.13□□□□□ -1.43
MIR539-201ENST00000365690 ZFRQ96KR1 1074 aaKnown RBP6.13□□□□□ -1.43
MIR539-201ENST00000365690 PPP1R15BQ5SWA1 713 aa6.12□□□□□ -1.43
MIR539-201ENST00000365690 NYAP1Q6ZVC0 841 aa6.12□□□□□ -1.43
MIR539-201ENST00000365690 LAPTM4BQ86VI4 370 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms