RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 KTN1Q86UP2 1357 aaKnown RBP13.44□□□□□ -0.26
HIPK1-202ENST00000361587 MORC1Q86VD1 984 aa13.43□□□□□ -0.26
HIPK1-202ENST00000361587 CHMP4AQ9BY43 222 aa13.43□□□□□ -0.26
HIPK1-202ENST00000361587 KIAA1211Q6ZU35 1233 aa13.42□□□□□ -0.26
HIPK1-202ENST00000361587 SENP3-EIF4A1A0A087X0R7 540 aa13.42□□□□□ -0.26
HIPK1-202ENST00000361587 LMOD2Q6P5Q4 547 aa13.41□□□□□ -0.26
HIPK1-202ENST00000361587 GNL2Q13823 731 aaKnown RBP13.41□□□□□ -0.26
HIPK1-202ENST00000361587 TCERG1O14776 1098 aaKnown RBP13.41□□□□□ -0.26
HIPK1-202ENST00000361587 RTF1Q92541 710 aaKnown RBP13.41□□□□□ -0.26
HIPK1-202ENST00000361587 RWDD1Q9H446 243 aaPredicted RBP13.41□□□□□ -0.26
HIPK1-202ENST00000361587 DCAF11Q8TEB1 546 aa13.4□□□□□ -0.26
HIPK1-202ENST00000361587 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
HIPK1-202ENST00000361587 TPM4P67936 248 aa13.39□□□□□ -0.27
HIPK1-202ENST00000361587 RALBP1Q15311 655 aa13.38□□□□□ -0.27
HIPK1-202ENST00000361587 SETD5Q9C0A6 1442 aa13.38□□□□□ -0.27
HIPK1-202ENST00000361587 RBM19Q9Y4C8 960 aaKnown RBP13.37□□□□□ -0.27
HIPK1-202ENST00000361587 SRPK2P78362 688 aaKnown RBP13.37□□□□□ -0.27
HIPK1-202ENST00000361587 HDGFL2Q7Z4V5 671 aaPredicted RBP13.37□□□□□ -0.27
HIPK1-202ENST00000361587 PMFBP1Q8TBY8 1022 aa13.37□□□□□ -0.27
HIPK1-202ENST00000361587 CCDC34Q96HJ3 373 aa13.37□□□□□ -0.27
HIPK1-202ENST00000361587 CSPP1Q1MSJ5 1256 aa13.37□□□□□ -0.27
HIPK1-202ENST00000361587 HDAC5Q9UQL6 1122 aa13.36□□□□□ -0.27
HIPK1-202ENST00000361587 USP35Q9P2H5 1018 aa13.35□□□□□ -0.27
HIPK1-202ENST00000361587 ARHGAP35Q9NRY4 1499 aa13.35□□□□□ -0.27
HIPK1-202ENST00000361587 RCAN3Q9UKA8 241 aa13.34□□□□□ -0.27
HIPK1-202ENST00000361587 HSPA5P11021 654 aaKnown RBP13.34□□□□□ -0.27
HIPK1-202ENST00000361587 CLSTN1O94985 981 aa13.34□□□□□ -0.27
HIPK1-202ENST00000361587 EIF3AQ14152 1382 aaKnown RBP13.33□□□□□ -0.28
HIPK1-202ENST00000361587 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
HIPK1-202ENST00000361587 GPATCH3Q96I76 525 aa13.32□□□□□ -0.28
HIPK1-202ENST00000361587 GOLGA6L3A6NEY3 463 aa13.32□□□□□ -0.28
HIPK1-202ENST00000361587 NOC3LQ8WTT2 800 aaKnown RBP13.3□□□□□ -0.28
HIPK1-202ENST00000361587 HMMRO75330 724 aa13.3□□□□□ -0.28
HIPK1-202ENST00000361587 ITPRIPQ8IWB1 547 aa13.3□□□□□ -0.28
HIPK1-202ENST00000361587 GOLGA6L1Q8N7Z2 621 aa13.29□□□□□ -0.28
HIPK1-202ENST00000361587 PHF14O94880 888 aa13.29□□□□□ -0.28
HIPK1-202ENST00000361587 CARMIL1Q5VZK9 1371 aa13.28□□□□□ -0.28
HIPK1-202ENST00000361587 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
HIPK1-202ENST00000361587 PDE3BQ13370 1112 aa13.28□□□□□ -0.28
HIPK1-202ENST00000361587 ROCK2O75116 1388 aaKnown RBP13.28□□□□□ -0.28
HIPK1-202ENST00000361587 SPAG9O60271 1321 aaKnown RBP13.28□□□□□ -0.28
HIPK1-202ENST00000361587 ISY1Q9ULR0 285 aaKnown RBP13.28□□□□□ -0.28
HIPK1-202ENST00000361587 EIF4G1Q04637 1599 aaKnown RBP13.27□□□□□ -0.28
HIPK1-202ENST00000361587 VPS8Q8N3P4 1428 aa13.27□□□□□ -0.29
HIPK1-202ENST00000361587 PHLDB1Q86UU1 1377 aa13.27□□□□□ -0.29
HIPK1-202ENST00000361587 STK31Q9BXU1 1019 aa13.27□□□□□ -0.29
HIPK1-202ENST00000361587 ERCC6Q03468 1493 aa13.27□□□□□ -0.29
HIPK1-202ENST00000361587 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
HIPK1-202ENST00000361587 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
HIPK1-202ENST00000361587 IPO9Q96P70 1041 aaKnown RBP13.26□□□□□ -0.29
HIPK1-202ENST00000361587 TNNT3P45378 269 aaPredicted RBP13.25□□□□□ -0.29
HIPK1-202ENST00000361587 KIF3AQ9Y496 699 aa13.25□□□□□ -0.29
HIPK1-202ENST00000361587 PKD2Q13563 968 aa13.25□□□□□ -0.29
HIPK1-202ENST00000361587 LMOD3Q0VAK6 560 aa13.24□□□□□ -0.29
HIPK1-202ENST00000361587 SLKQ9H2G2 1235 aaPredicted RBP13.24□□□□□ -0.29
HIPK1-202ENST00000361587 APBB1O00213 710 aa13.23□□□□□ -0.29
HIPK1-202ENST00000361587 CHMP4CQ96CF2 233 aa13.23□□□□□ -0.29
HIPK1-202ENST00000361587 CUX2O14529 1486 aa13.23□□□□□ -0.29
HIPK1-202ENST00000361587 DDX11L8A8MPP1 907 aa13.23□□□□□ -0.29
HIPK1-202ENST00000361587 GZF1Q9H116 711 aaPredicted RBP13.23□□□□□ -0.29
HIPK1-202ENST00000361587 MFAP1P55081 439 aaKnown RBP13.22□□□□□ -0.29
HIPK1-202ENST00000361587 ST18O60284 1047 aa13.22□□□□□ -0.29
HIPK1-202ENST00000361587 CARMIL2Q6F5E8 1435 aa13.22□□□□□ -0.29
HIPK1-202ENST00000361587 ANKRD30AQ9BXX3 1397 aa13.22□□□□□ -0.29
HIPK1-202ENST00000361587 SOX12O15370 315 aa13.22□□□□□ -0.29
HIPK1-202ENST00000361587 HSP90B1P14625 803 aaKnown RBP13.22□□□□□ -0.29
HIPK1-202ENST00000361587 SMC4Q9NTJ3 1288 aa13.21□□□□□ -0.29
HIPK1-202ENST00000361587 GORABQ5T7V8 394 aa13.21□□□□□ -0.29
HIPK1-202ENST00000361587 TMX4Q9H1E5 349 aaPredicted RBP13.2□□□□□ -0.3
HIPK1-202ENST00000361587 TPM3P06753 285 aa13.2□□□□□ -0.3
HIPK1-202ENST00000361587 TERF2IPQ9NYB0 399 aa13.2□□□□□ -0.3
HIPK1-202ENST00000361587 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
HIPK1-202ENST00000361587 A0A0U1RQG5 324 aaPredicted RBP13.2□□□□□ -0.3
HIPK1-202ENST00000361587 CENPJQ9HC77 1338 aaPredicted RBP13.19□□□□□ -0.3
HIPK1-202ENST00000361587 TRIM6-TRIM34B2RNG4 842 aa13.18□□□□□ -0.3
HIPK1-202ENST00000361587 SAFB2Q14151 953 aaKnown RBP eCLIP13.18□□□□□ -0.3
HIPK1-202ENST00000361587 NLRP13Q86W25 1043 aa13.18□□□□□ -0.3
HIPK1-202ENST00000361587 KIF16BQ96L93 1317 aa13.18□□□□□ -0.3
HIPK1-202ENST00000361587 MPHOSPH9Q99550 1183 aa13.18□□□□□ -0.3
HIPK1-202ENST00000361587 SKOR2Q2VWA4 1001 aaPredicted RBP13.17□□□□□ -0.3
HIPK1-202ENST00000361587 TAF7LQ5H9L4 462 aa13.17□□□□□ -0.3
HIPK1-202ENST00000361587 CECR2Q9BXF3 1484 aa13.17□□□□□ -0.3
HIPK1-202ENST00000361587 CSB-PGBD3P0DP91 1061 aa13.17□□□□□ -0.3
HIPK1-202ENST00000361587 STK26Q9P289 416 aa13.17□□□□□ -0.3
HIPK1-202ENST00000361587 RAB3GAP2Q9H2M9 1393 aa13.16□□□□□ -0.3
HIPK1-202ENST00000361587 NUP155O75694 1391 aa13.16□□□□□ -0.3
HIPK1-202ENST00000361587 RASSF8Q8NHQ8 419 aa13.16□□□□□ -0.3
HIPK1-202ENST00000361587 ATP6V1DQ9Y5K8 247 aa13.16□□□□□ -0.3
HIPK1-202ENST00000361587 CEP89Q96ST8 783 aa13.15□□□□□ -0.3
HIPK1-202ENST00000361587 AMER1Q5JTC6 1135 aaPredicted RBP13.14□□□□□ -0.31
HIPK1-202ENST00000361587 KIF15Q9NS87 1388 aa13.14□□□□□ -0.31
HIPK1-202ENST00000361587 GGT6Q6P531 493 aa13.14□□□□□ -0.31
HIPK1-202ENST00000361587 RSPH6AQ9H0K4 717 aa13.14□□□□□ -0.31
HIPK1-202ENST00000361587 SETQ01105 290 aaPredicted RBP13.14□□□□□ -0.31
HIPK1-202ENST00000361587 EFCAB2Q5VUJ9 269 aa13.14□□□□□ -0.31
HIPK1-202ENST00000361587 CENPQQ7L2Z9 268 aaPredicted RBP13.13□□□□□ -0.31
HIPK1-202ENST00000361587 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
HIPK1-202ENST00000361587 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
HIPK1-202ENST00000361587 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
HIPK1-202ENST00000361587 RSPH4AQ5TD94 716 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms