RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 BBXQ8WY36 941 aaPredicted RBP15.06■□□□□ 0
CNOT4-203ENST00000361528 XRCC6P12956 609 aaKnown RBP eCLIP15.05■□□□□ 0
CNOT4-203ENST00000361528 ESPNB1AK53 854 aa15.05■□□□□ -0
CNOT4-203ENST00000361528 UTP14CQ5TAP6 766 aaKnown RBP15.05■□□□□ -0
CNOT4-203ENST00000361528 NAP1L2Q9ULW6 460 aaPredicted RBP15.05■□□□□ -0
CNOT4-203ENST00000361528 SLC4A3P48751 1232 aa15.04■□□□□ -0
CNOT4-203ENST00000361528 MTERF4Q7Z6M4 381 aaKnown RBP15.04■□□□□ -0
CNOT4-203ENST00000361528 CANXP27824 592 aaKnown RBP15.03■□□□□ -0
CNOT4-203ENST00000361528 IPO4Q8TEX9 1081 aaKnown RBP15.03■□□□□ -0
CNOT4-203ENST00000361528 ISY1Q9ULR0 285 aaKnown RBP15.03■□□□□ -0
CNOT4-203ENST00000361528 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
CNOT4-203ENST00000361528 RANGAP1P46060 587 aaPredicted RBP15.02■□□□□ -0
CNOT4-203ENST00000361528 GTF2E1P29083 439 aaPredicted RBP15.02□□□□□ -0.01
CNOT4-203ENST00000361528 CNGB1Q14028 1251 aaPredicted RBP15.01□□□□□ -0.01
CNOT4-203ENST00000361528 EXOC6Q8TAG9 804 aa15.01□□□□□ -0.01
CNOT4-203ENST00000361528 NCOA1Q15788 1441 aa15.01□□□□□ -0.01
CNOT4-203ENST00000361528 KDM5BQ9UGL1 1544 aa15.01□□□□□ -0.01
CNOT4-203ENST00000361528 MRE11P49959 708 aa15□□□□□ -0.01
CNOT4-203ENST00000361528 FAM161AQ3B820 660 aa15□□□□□ -0.01
CNOT4-203ENST00000361528 HSPA5P11021 654 aaKnown RBP14.99□□□□□ -0.01
CNOT4-203ENST00000361528 RSPH4AQ5TD94 716 aa14.98□□□□□ -0.01
CNOT4-203ENST00000361528 CCDC7Q96M83 1385 aa14.98□□□□□ -0.01
CNOT4-203ENST00000361528 EIF4G2P78344 907 aaKnown RBP eCLIP14.98□□□□□ -0.01
CNOT4-203ENST00000361528 STAC3Q96MF2 364 aa14.98□□□□□ -0.01
CNOT4-203ENST00000361528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.96□□□□□ -0.01
CNOT4-203ENST00000361528 MYH16Q9H6N6 1097 aa14.95□□□□□ -0.02
CNOT4-203ENST00000361528 KIAA1211Q6ZU35 1233 aa14.94□□□□□ -0.02
CNOT4-203ENST00000361528 KTN1Q86UP2 1357 aaKnown RBP14.94□□□□□ -0.02
CNOT4-203ENST00000361528 DMTNQ08495 405 aa14.93□□□□□ -0.02
CNOT4-203ENST00000361528 POLR1AO95602 1720 aaPredicted RBP14.93□□□□□ -0.02
CNOT4-203ENST00000361528 BECN1Q14457 450 aa14.93□□□□□ -0.02
CNOT4-203ENST00000361528 TRIM44Q96DX7 344 aaPredicted RBP14.92□□□□□ -0.02
CNOT4-203ENST00000361528 RCAN3Q9UKA8 241 aa14.92□□□□□ -0.02
CNOT4-203ENST00000361528 TIAM1Q13009 1591 aa14.92□□□□□ -0.02
CNOT4-203ENST00000361528 C8orf34Q49A92 452 aa14.92□□□□□ -0.02
CNOT4-203ENST00000361528 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.92□□□□□ -0.02
CNOT4-203ENST00000361528 UACAQ9BZF9 1416 aa14.91□□□□□ -0.02
CNOT4-203ENST00000361528 TNNT2P45379 298 aaPredicted RBP14.91□□□□□ -0.02
CNOT4-203ENST00000361528 PANK2Q9BZ23 570 aa14.9□□□□□ -0.02
CNOT4-203ENST00000361528 PRXQ9BXM0 1461 aa14.9□□□□□ -0.02
CNOT4-203ENST00000361528 OFD1O75665 1012 aa14.9□□□□□ -0.02
CNOT4-203ENST00000361528 ERBB4Q15303 1308 aa14.89□□□□□ -0.03
CNOT4-203ENST00000361528 KIF20AO95235 890 aa14.89□□□□□ -0.03
CNOT4-203ENST00000361528 PDE3BQ13370 1112 aa14.89□□□□□ -0.03
CNOT4-203ENST00000361528 RIPK4P57078 832 aa14.88□□□□□ -0.03
CNOT4-203ENST00000361528 CHMP4BQ9H444 224 aaKnown RBP14.88□□□□□ -0.03
CNOT4-203ENST00000361528 CENPQQ7L2Z9 268 aaPredicted RBP14.88□□□□□ -0.03
CNOT4-203ENST00000361528 PHLDB1Q86UU1 1377 aa14.87□□□□□ -0.03
CNOT4-203ENST00000361528 KDM2BQ8NHM5 1336 aa14.87□□□□□ -0.03
CNOT4-203ENST00000361528 GRPEL1Q9HAV7 217 aa14.86□□□□□ -0.03
CNOT4-203ENST00000361528 TAF3Q5VWG9 929 aa14.86□□□□□ -0.03
CNOT4-203ENST00000361528 MYOM3Q5VTT5 1437 aa14.86□□□□□ -0.03
CNOT4-203ENST00000361528 GTPBP4Q9BZE4 634 aaKnown RBP14.85□□□□□ -0.03
CNOT4-203ENST00000361528 LRRC9Q6ZRR7 1453 aa14.85□□□□□ -0.03
CNOT4-203ENST00000361528 ANTXR1Q9H6X2 564 aa14.85□□□□□ -0.03
CNOT4-203ENST00000361528 ARID4BQ4LE39 1312 aaPredicted RBP14.84□□□□□ -0.03
CNOT4-203ENST00000361528 ZHX1Q9UKY1 873 aaPredicted RBP14.84□□□□□ -0.03
CNOT4-203ENST00000361528 PPP4R3BQ5MIZ7 849 aa14.84□□□□□ -0.03
CNOT4-203ENST00000361528 LRPPRCP42704 1394 aaKnown RBP14.84□□□□□ -0.03
CNOT4-203ENST00000361528 PNISRQ8TF01 805 aaKnown RBP14.83□□□□□ -0.04
CNOT4-203ENST00000361528 CCDC18Q5T9S5 1454 aa14.83□□□□□ -0.04
CNOT4-203ENST00000361528 VIRMAQ69YN4 1812 aaKnown RBP14.82□□□□□ -0.04
CNOT4-203ENST00000361528 DYNC1I1O14576 645 aa14.81□□□□□ -0.04
CNOT4-203ENST00000361528 VGFO15240 615 aaPredicted RBP14.81□□□□□ -0.04
CNOT4-203ENST00000361528 LETM1O95202 739 aaPredicted RBP14.81□□□□□ -0.04
CNOT4-203ENST00000361528 ARXQ96QS3 562 aa14.81□□□□□ -0.04
CNOT4-203ENST00000361528 TMEM51Q9NW97 253 aa14.81□□□□□ -0.04
CNOT4-203ENST00000361528 MCM4P33991 863 aa14.81□□□□□ -0.04
CNOT4-203ENST00000361528 ZSCAN30Q86W11 494 aa14.81□□□□□ -0.04
CNOT4-203ENST00000361528 FAM13BQ9NYF5 915 aa14.81□□□□□ -0.04
CNOT4-203ENST00000361528 ARHGAP35Q9NRY4 1499 aa14.81□□□□□ -0.04
CNOT4-203ENST00000361528 DHX29Q7Z478 1369 aaKnown RBP14.8□□□□□ -0.04
CNOT4-203ENST00000361528 ZSCAN20P17040 1043 aaPredicted RBP14.79□□□□□ -0.04
CNOT4-203ENST00000361528 FAM50AQ14320 339 aaKnown RBP14.79□□□□□ -0.04
CNOT4-203ENST00000361528 FTSJ3Q8IY81 847 aaKnown RBP14.79□□□□□ -0.04
CNOT4-203ENST00000361528 CCDC94Q9BW85 323 aaPredicted RBP14.79□□□□□ -0.04
CNOT4-203ENST00000361528 HFM1A2PYH4 1435 aa14.79□□□□□ -0.04
CNOT4-203ENST00000361528 PAXIP1Q6ZW49 1069 aaPredicted RBP14.78□□□□□ -0.04
CNOT4-203ENST00000361528 CCDC173Q0VFZ6 552 aa14.78□□□□□ -0.04
CNOT4-203ENST00000361528 TRAK2O60296 914 aa14.77□□□□□ -0.04
CNOT4-203ENST00000361528 KLHL34Q8N239 644 aa14.77□□□□□ -0.04
CNOT4-203ENST00000361528 KIF7Q2M1P5 1343 aa14.77□□□□□ -0.04
CNOT4-203ENST00000361528 SMARCA4P51532 1647 aa14.77□□□□□ -0.05
CNOT4-203ENST00000361528 ANP32BQ92688 251 aaKnown RBP14.76□□□□□ -0.05
CNOT4-203ENST00000361528 PPP1R9BQ96SB3 815 aa14.76□□□□□ -0.05
CNOT4-203ENST00000361528 DDX11L8A8MPP1 907 aa14.75□□□□□ -0.05
CNOT4-203ENST00000361528 HS1BP3Q53T59 392 aa14.75□□□□□ -0.05
CNOT4-203ENST00000361528 CRBNQ96SW2 442 aa14.75□□□□□ -0.05
CNOT4-203ENST00000361528 CFAP43Q8NDM7 1665 aa14.75□□□□□ -0.05
CNOT4-203ENST00000361528 SPATA31E1Q6ZUB1 1445 aa14.75□□□□□ -0.05
CNOT4-203ENST00000361528 USP19O94966 1318 aa14.74□□□□□ -0.05
CNOT4-203ENST00000361528 MSNP26038 577 aaKnown RBP14.74□□□□□ -0.05
CNOT4-203ENST00000361528 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
CNOT4-203ENST00000361528 PTPN23Q9H3S7 1636 aa14.74□□□□□ -0.05
CNOT4-203ENST00000361528 CCDC144AA2RUR9 1427 aa14.74□□□□□ -0.05
CNOT4-203ENST00000361528 BRD4O60885 1362 aaPredicted RBP14.73□□□□□ -0.05
CNOT4-203ENST00000361528 TMC1Q8TDI8 760 aa14.73□□□□□ -0.05
CNOT4-203ENST00000361528 SLKQ9H2G2 1235 aaPredicted RBP14.73□□□□□ -0.05
CNOT4-203ENST00000361528 ROCK2O75116 1388 aaKnown RBP14.72□□□□□ -0.05
CNOT4-203ENST00000361528 CSPP1Q1MSJ5 1256 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms