RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 MYO5CQ9NQX4 1742 aa24.89■■□□□ 1.58
GDPD3-201ENST00000360688 SCAPERQ9BY12 1400 aa24.89■■□□□ 1.58
GDPD3-201ENST00000360688 POGZQ7Z3K3 1410 aa24.87■■□□□ 1.57
GDPD3-201ENST00000360688 LMTK3Q96Q04 1460 aa24.87■■□□□ 1.57
GDPD3-201ENST00000360688 CDK11AQ9UQ88 783 aaPredicted RBP24.86■■□□□ 1.57
GDPD3-201ENST00000360688 KIF14Q15058 1648 aa24.85■■□□□ 1.57
GDPD3-201ENST00000360688 LRRIQ1Q96JM4 1722 aa24.84■■□□□ 1.57
GDPD3-201ENST00000360688 EFCAB2Q5VUJ9 269 aa24.83■■□□□ 1.56
GDPD3-201ENST00000360688 TROQ12816 1431 aaPredicted RBP24.81■■□□□ 1.56
GDPD3-201ENST00000360688 FER1L4A9Z1Z3 1794 aa24.79■■□□□ 1.56
GDPD3-201ENST00000360688 MLECQ14165 292 aa24.78■■□□□ 1.56
GDPD3-201ENST00000360688 ATP10AO60312 1499 aa24.77■■□□□ 1.56
GDPD3-201ENST00000360688 CLIP1P30622 1438 aa24.76■■□□□ 1.55
GDPD3-201ENST00000360688 PLPPR3Q6T4P5 718 aa24.76■■□□□ 1.55
GDPD3-201ENST00000360688 ARHGAP5Q13017 1502 aa24.76■■□□□ 1.55
GDPD3-201ENST00000360688 C9orf84Q5VXU9 1444 aa24.74■■□□□ 1.55
GDPD3-201ENST00000360688 FBXO41Q8TF61 875 aa24.74■■□□□ 1.55
GDPD3-201ENST00000360688 ZNF518AQ6AHZ1 1483 aa24.73■■□□□ 1.55
GDPD3-201ENST00000360688 ARHGEF12Q9NZN5 1544 aa24.72■■□□□ 1.55
GDPD3-201ENST00000360688 CDC42BPBQ9Y5S2 1711 aa24.72■■□□□ 1.55
GDPD3-201ENST00000360688 HSPA2P54652 639 aa24.71■■□□□ 1.55
GDPD3-201ENST00000360688 KDM5CP41229 1560 aa24.71■■□□□ 1.55
GDPD3-201ENST00000360688 AFAP1Q8N556 730 aa24.69■■□□□ 1.54
GDPD3-201ENST00000360688 CASKIN1Q8WXD9 1431 aa24.68■■□□□ 1.54
GDPD3-201ENST00000360688 CCDC18Q5T9S5 1454 aa24.66■■□□□ 1.54
GDPD3-201ENST00000360688 PREX2Q70Z35 1606 aa24.66■■□□□ 1.54
GDPD3-201ENST00000360688 DIP2CQ9Y2E4 1556 aa24.64■■□□□ 1.53
GDPD3-201ENST00000360688 ABCC1P33527 1531 aa24.61■■□□□ 1.53
GDPD3-201ENST00000360688 REREQ9P2R6 1566 aa24.61■■□□□ 1.53
GDPD3-201ENST00000360688 ABCA6Q8N139 1617 aa24.61■■□□□ 1.53
GDPD3-201ENST00000360688 MYT1LQ9UL68 1186 aa24.61■■□□□ 1.53
GDPD3-201ENST00000360688 MLH3Q9UHC1 1453 aa24.6■■□□□ 1.53
GDPD3-201ENST00000360688 PREX1Q8TCU6 1659 aa24.6■■□□□ 1.53
GDPD3-201ENST00000360688 ITSN2Q9NZM3 1697 aa24.6■■□□□ 1.53
GDPD3-201ENST00000360688 CEBPAP49715 358 aaPredicted RBP24.6■■□□□ 1.53
GDPD3-201ENST00000360688 CDC42BPAQ5VT25 1732 aa24.59■■□□□ 1.53
GDPD3-201ENST00000360688 TRAPPC8Q9Y2L5 1435 aa24.59■■□□□ 1.53
GDPD3-201ENST00000360688 FYCO1Q9BQS8 1478 aa24.58■■□□□ 1.53
GDPD3-201ENST00000360688 SETD1BQ9UPS6 1966 aaKnown RBP24.55■■□□□ 1.52
GDPD3-201ENST00000360688 KIDINS220Q9ULH0 1771 aa24.53■■□□□ 1.52
GDPD3-201ENST00000360688 AGLP35573 1532 aa24.52■■□□□ 1.52
GDPD3-201ENST00000360688 C3P01024 1663 aa24.49■■□□□ 1.51
GDPD3-201ENST00000360688 SAMD9LQ8IVG5 1584 aa24.48■■□□□ 1.51
GDPD3-201ENST00000360688 STRCQ7RTU9 1775 aa24.47■■□□□ 1.51
GDPD3-201ENST00000360688 UHRF1BP1Q6BDS2 1440 aa24.46■■□□□ 1.51
GDPD3-201ENST00000360688 GPATCH8Q9UKJ3 1502 aaKnown RBP24.46■■□□□ 1.51
GDPD3-201ENST00000360688 CERKQ8TCT0 537 aa24.45■■□□□ 1.5
GDPD3-201ENST00000360688 ZNF777Q9ULD5 760 aaPredicted RBP24.45■■□□□ 1.5
GDPD3-201ENST00000360688 SYCP2Q9BX26 1530 aa24.43■■□□□ 1.5
GDPD3-201ENST00000360688 ESF1Q9H501 851 aaKnown RBP24.42■■□□□ 1.5
GDPD3-201ENST00000360688 HNRNPMP52272 730 aaKnown RBP eCLIP24.39■■□□□ 1.5
GDPD3-201ENST00000360688 CNTLNQ9NXG0 1405 aa24.37■■□□□ 1.49
GDPD3-201ENST00000360688 DMRT2Q9Y5R5 561 aa24.37■■□□□ 1.49
GDPD3-201ENST00000360688 SPAG9O60271 1321 aaKnown RBP24.37■■□□□ 1.49
GDPD3-201ENST00000360688 SUPT6HQ7KZ85 1726 aaKnown RBP24.36■■□□□ 1.49
GDPD3-201ENST00000360688 KIAA1107Q9UPP5 1409 aa24.36■■□□□ 1.49
GDPD3-201ENST00000360688 CFDP1Q9UEE9 299 aaPredicted RBP24.35■■□□□ 1.49
GDPD3-201ENST00000360688 CCNB3Q8WWL7 1395 aa24.35■■□□□ 1.49
GDPD3-201ENST00000360688 PLEKHH2Q8IVE3 1493 aa24.35■■□□□ 1.49
GDPD3-201ENST00000360688 ATP7AQ04656 1500 aa24.34■■□□□ 1.49
GDPD3-201ENST00000360688 MTUS2Q5JR59 1369 aa24.34■■□□□ 1.49
GDPD3-201ENST00000360688 MROH2AA6NES4 1674 aa24.34■■□□□ 1.49
GDPD3-201ENST00000360688 INO80Q9ULG1 1556 aaPredicted RBP24.34■■□□□ 1.49
GDPD3-201ENST00000360688 PLXNC1O60486 1568 aa24.3■■□□□ 1.48
GDPD3-201ENST00000360688 PTPRTO14522 1441 aa24.29■■□□□ 1.48
GDPD3-201ENST00000360688 A2MP01023 1474 aa24.28■■□□□ 1.48
GDPD3-201ENST00000360688 TIAM1Q13009 1591 aa24.27■■□□□ 1.48
GDPD3-201ENST00000360688 NPATQ14207 1427 aa24.27■■□□□ 1.48
GDPD3-201ENST00000360688 ZMYM3Q14202 1370 aa24.27■■□□□ 1.48
GDPD3-201ENST00000360688 CLTCQ00610 1675 aaKnown RBP24.26■■□□□ 1.47
GDPD3-201ENST00000360688 EHBP1L1Q8N3D4 1523 aa24.26■■□□□ 1.47
GDPD3-201ENST00000360688 NCOA1Q15788 1441 aa24.25■■□□□ 1.47
GDPD3-201ENST00000360688 ZNF644Q9H582 1327 aaPredicted RBP24.24■■□□□ 1.47
GDPD3-201ENST00000360688 ADGBQ8N7X0 1667 aa24.23■■□□□ 1.47
GDPD3-201ENST00000360688 MBD5Q9P267 1494 aa24.21■■□□□ 1.47
GDPD3-201ENST00000360688 CEP162Q5TB80 1403 aa24.21■■□□□ 1.47
GDPD3-201ENST00000360688 CAMSAP1Q5T5Y3 1602 aa24.21■■□□□ 1.47
GDPD3-201ENST00000360688 GGT6Q6P531 493 aa24.19■■□□□ 1.46
GDPD3-201ENST00000360688 LTBP4Q8N2S1 1624 aa24.18■■□□□ 1.46
GDPD3-201ENST00000360688 MYO3AQ8NEV4 1616 aa24.17■■□□□ 1.46
GDPD3-201ENST00000360688 PTPRKQ15262 1439 aa24.17■■□□□ 1.46
GDPD3-201ENST00000360688 ZNF142P52746 1687 aaPredicted RBP24.16■■□□□ 1.46
GDPD3-201ENST00000360688 RTEL1-TNFRSF6BF6WH68 1400 aa24.15■■□□□ 1.46
GDPD3-201ENST00000360688 PPP6R1Q9UPN7 881 aa24.14■■□□□ 1.46
GDPD3-201ENST00000360688 CEP170BQ9Y4F5 1589 aaPredicted RBP24.12■■□□□ 1.45
GDPD3-201ENST00000360688 NCOA2Q15596 1464 aa24.11■■□□□ 1.45
GDPD3-201ENST00000360688 NCKAP5LQ9HCH0 1330 aa24.11■■□□□ 1.45
GDPD3-201ENST00000360688 DHX29Q7Z478 1369 aaKnown RBP24.11■■□□□ 1.45
GDPD3-201ENST00000360688 PLA2R1Q13018 1463 aa24.09■■□□□ 1.45
GDPD3-201ENST00000360688 CAMSAP2Q08AD1 1489 aa24.08■■□□□ 1.45
GDPD3-201ENST00000360688 IQSEC2Q5JU85 1478 aa24.08■■□□□ 1.45
GDPD3-201ENST00000360688 CCDC141Q6ZP82 1450 aa24.08■■□□□ 1.45
GDPD3-201ENST00000360688 TCOF1Q13428 1488 aaKnown RBP24.06■■□□□ 1.44
GDPD3-201ENST00000360688 PKD2Q13563 968 aa24.04■■□□□ 1.44
GDPD3-201ENST00000360688 RSPH4AQ5TD94 716 aa24.04■■□□□ 1.44
GDPD3-201ENST00000360688 KIF3BO15066 747 aa24.03■■□□□ 1.44
GDPD3-201ENST00000360688 A2ML1A8K2U0 1454 aa24.02■■□□□ 1.44
GDPD3-201ENST00000360688 ZNF335Q9H4Z2 1342 aaPredicted RBP24.01■■□□□ 1.43
GDPD3-201ENST00000360688 DNMT1P26358 1616 aaKnown RBP24.01■■□□□ 1.43
GDPD3-201ENST00000360688 ARHGEF5Q12774 1597 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms