RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 PREX2Q70Z35 1606 aa31.35■■■□□ 2.61
MAP1LC3A-201ENST00000360668 CCER1Q8TC90 406 aaPredicted RBP31.34■■■□□ 2.61
MAP1LC3A-201ENST00000360668 SETD5Q9C0A6 1442 aa31.33■■■□□ 2.61
MAP1LC3A-201ENST00000360668 FAM69CQ0P6D2 419 aa31.32■■■□□ 2.6
MAP1LC3A-201ENST00000360668 DNMT1P26358 1616 aaKnown RBP31.32■■■□□ 2.6
MAP1LC3A-201ENST00000360668 ZNF644Q9H582 1327 aaPredicted RBP31.31■■■□□ 2.6
MAP1LC3A-201ENST00000360668 KCNH8Q96L42 1107 aa31.3■■■□□ 2.6
MAP1LC3A-201ENST00000360668 CDC42BPBQ9Y5S2 1711 aa31.3■■■□□ 2.6
MAP1LC3A-201ENST00000360668 MYO5CQ9NQX4 1742 aa31.29■■■□□ 2.6
MAP1LC3A-201ENST00000360668 DAPK1P53355 1430 aa31.28■■■□□ 2.6
MAP1LC3A-201ENST00000360668 ASXL2Q76L83 1435 aa31.28■■■□□ 2.6
MAP1LC3A-201ENST00000360668 KIF13AQ9H1H9 1805 aa31.26■■■□□ 2.59
MAP1LC3A-201ENST00000360668 RAB3GAP2Q9H2M9 1393 aa31.26■■■□□ 2.59
MAP1LC3A-201ENST00000360668 HFM1A2PYH4 1435 aa31.25■■■□□ 2.59
MAP1LC3A-201ENST00000360668 ABCC5O15440 1437 aa31.25■■■□□ 2.59
MAP1LC3A-201ENST00000360668 AKNAQ7Z591 1439 aa31.24■■■□□ 2.59
MAP1LC3A-201ENST00000360668 ZNF777Q9ULD5 760 aaPredicted RBP31.24■■■□□ 2.59
MAP1LC3A-201ENST00000360668 DIP2BQ9P265 1576 aa31.23■■■□□ 2.59
MAP1LC3A-201ENST00000360668 PLCH2O75038 1416 aa31.2■■■□□ 2.59
MAP1LC3A-201ENST00000360668 ARHGAP5Q13017 1502 aa31.2■■■□□ 2.59
MAP1LC3A-201ENST00000360668 SAMD9LQ8IVG5 1584 aa31.19■■■□□ 2.58
MAP1LC3A-201ENST00000360668 ROCK1Q13464 1354 aa31.18■■■□□ 2.58
MAP1LC3A-201ENST00000360668 ARAP3Q8WWN8 1544 aa31.18■■■□□ 2.58
MAP1LC3A-201ENST00000360668 ABCA9Q8IUA7 1624 aa31.18■■■□□ 2.58
MAP1LC3A-201ENST00000360668 NAIPQ13075 1403 aa31.17■■■□□ 2.58
MAP1LC3A-201ENST00000360668 CROCC2H7BZ55 1655 aa31.17■■■□□ 2.58
MAP1LC3A-201ENST00000360668 ARHGEF5Q12774 1597 aa31.15■■■□□ 2.58
MAP1LC3A-201ENST00000360668 GCC2Q8IWJ2 1684 aa31.15■■■□□ 2.58
MAP1LC3A-201ENST00000360668 CHIC2Q9UKJ5 165 aa31.13■■■□□ 2.57
MAP1LC3A-201ENST00000360668 PLEKHH2Q8IVE3 1493 aa31.13■■■□□ 2.57
MAP1LC3A-201ENST00000360668 DHX57Q6P158 1386 aaKnown RBP31.13■■■□□ 2.57
MAP1LC3A-201ENST00000360668 SHANK2Q9UPX8 1470 aa31.11■■■□□ 2.57
MAP1LC3A-201ENST00000360668 MBD5Q9P267 1494 aa31.1■■■□□ 2.57
MAP1LC3A-201ENST00000360668 ADGBQ8N7X0 1667 aa31.1■■■□□ 2.57
MAP1LC3A-201ENST00000360668 KIAA1107Q9UPP5 1409 aa31.09■■■□□ 2.57
MAP1LC3A-201ENST00000360668 EFCAB2Q5VUJ9 269 aa31.09■■■□□ 2.57
MAP1LC3A-201ENST00000360668 ADGRL2O95490 1459 aa31.08■■■□□ 2.57
MAP1LC3A-201ENST00000360668 RSPH4AQ5TD94 716 aa31.08■■■□□ 2.57
MAP1LC3A-201ENST00000360668 RRP7BPQ9NSQ0 103 aa31.06■■■□□ 2.56
MAP1LC3A-201ENST00000360668 CLSPNQ9HAW4 1339 aa31.06■■■□□ 2.56
MAP1LC3A-201ENST00000360668 CCDC141Q6ZP82 1450 aa31.05■■■□□ 2.56
MAP1LC3A-201ENST00000360668 SYCP2Q9BX26 1530 aa31.04■■■□□ 2.56
MAP1LC3A-201ENST00000360668 HNRNPMP52272 730 aaKnown RBP eCLIP31.04■■■□□ 2.56
MAP1LC3A-201ENST00000360668 GLI2P10070 1586 aa31.04■■■□□ 2.56
MAP1LC3A-201ENST00000360668 NCOA1Q15788 1441 aa31.01■■■□□ 2.55
MAP1LC3A-201ENST00000360668 C9orf84Q5VXU9 1444 aa31.01■■■□□ 2.55
MAP1LC3A-201ENST00000360668 ABCC1P33527 1531 aa31■■■□□ 2.55
MAP1LC3A-201ENST00000360668 ANKRD30AQ9BXX3 1397 aa30.99■■■□□ 2.55
MAP1LC3A-201ENST00000360668 TSPY4P0CV99 314 aa30.99■■■□□ 2.55
MAP1LC3A-201ENST00000360668 TSPY10P0CW01 314 aa30.99■■■□□ 2.55
MAP1LC3A-201ENST00000360668 ACIN1Q9UKV3 1341 aaKnown RBP30.96■■■□□ 2.55
MAP1LC3A-201ENST00000360668 MAST1Q9Y2H9 1570 aa30.96■■■□□ 2.55
MAP1LC3A-201ENST00000360668 FANCAO15360 1455 aa30.96■■■□□ 2.55
MAP1LC3A-201ENST00000360668 ARHGEF12Q9NZN5 1544 aa30.95■■■□□ 2.55
MAP1LC3A-201ENST00000360668 KDM6BO15054 1643 aa30.93■■■□□ 2.54
MAP1LC3A-201ENST00000360668 CD109Q6YHK3 1445 aa30.92■■■□□ 2.54
MAP1LC3A-201ENST00000360668 TSPOAP1O95153 1857 aa30.9■■■□□ 2.54
MAP1LC3A-201ENST00000360668 CFAP74Q9C0B2 1584 aa30.88■■■□□ 2.53
MAP1LC3A-201ENST00000360668 MAP3K4Q9Y6R4 1608 aa30.86■■■□□ 2.53
MAP1LC3A-201ENST00000360668 PPRC1Q5VV67 1664 aaKnown RBP30.83■■■□□ 2.53
MAP1LC3A-201ENST00000360668 TRAPPC8Q9Y2L5 1435 aa30.83■■■□□ 2.53
MAP1LC3A-201ENST00000360668 ADGRL1O94910 1474 aa30.82■■■□□ 2.53
MAP1LC3A-201ENST00000360668 PLXNC1O60486 1568 aa30.82■■■□□ 2.52
MAP1LC3A-201ENST00000360668 KIF15Q9NS87 1388 aa30.81■■■□□ 2.52
MAP1LC3A-201ENST00000360668 ANKRD50Q9ULJ7 1429 aa30.8■■■□□ 2.52
MAP1LC3A-201ENST00000360668 SCAPERQ9BY12 1400 aa30.77■■■□□ 2.52
MAP1LC3A-201ENST00000360668 RTEL1-TNFRSF6BF6WH68 1400 aa30.76■■■□□ 2.51
MAP1LC3A-201ENST00000360668 TEX14Q8IWB6 1497 aa30.76■■■□□ 2.51
MAP1LC3A-201ENST00000360668 NEO1Q92859 1461 aa30.75■■■□□ 2.51
MAP1LC3A-201ENST00000360668 TRIM52Q96A61 297 aa30.75■■■□□ 2.51
MAP1LC3A-201ENST00000360668 SPAG9O60271 1321 aaKnown RBP30.71■■■□□ 2.51
MAP1LC3A-201ENST00000360668 ZFYVE16Q7Z3T8 1539 aa30.7■■■□□ 2.51
MAP1LC3A-201ENST00000360668 AFAP1Q8N556 730 aa30.7■■■□□ 2.5
MAP1LC3A-201ENST00000360668 DUOX2Q9NRD8 1548 aa30.69■■■□□ 2.5
MAP1LC3A-201ENST00000360668 COL17A1Q9UMD9 1497 aaPredicted RBP30.68■■■□□ 2.5
MAP1LC3A-201ENST00000360668 INO80Q9ULG1 1556 aaPredicted RBP30.68■■■□□ 2.5
MAP1LC3A-201ENST00000360668 ZNF518AQ6AHZ1 1483 aa30.67■■■□□ 2.5
MAP1LC3A-201ENST00000360668 MPHOSPH9Q99550 1183 aa30.66■■■□□ 2.5
MAP1LC3A-201ENST00000360668 DENND4BO75064 1496 aaPredicted RBP30.64■■■□□ 2.5
MAP1LC3A-201ENST00000360668 ATP7AQ04656 1500 aa30.64■■■□□ 2.5
MAP1LC3A-201ENST00000360668 POGZQ7Z3K3 1410 aa30.63■■■□□ 2.49
MAP1LC3A-201ENST00000360668 ERBINQ96RT1 1412 aa30.62■■■□□ 2.49
MAP1LC3A-201ENST00000360668 KDM5DQ9BY66 1539 aa30.62■■■□□ 2.49
MAP1LC3A-201ENST00000360668 PZPP20742 1482 aa30.61■■■□□ 2.49
MAP1LC3A-201ENST00000360668 KDM5CP41229 1560 aa30.6■■■□□ 2.49
MAP1LC3A-201ENST00000360668 UNC13BO14795 1591 aa30.56■■■□□ 2.48
MAP1LC3A-201ENST00000360668 SLC4A1APQ9BWU0 796 aaKnown RBP30.55■■■□□ 2.48
MAP1LC3A-201ENST00000360668 KIDINS220Q9ULH0 1771 aa30.54■■■□□ 2.48
MAP1LC3A-201ENST00000360668 MLH3Q9UHC1 1453 aa30.54■■■□□ 2.48
MAP1LC3A-201ENST00000360668 NUP155O75694 1391 aa30.54■■■□□ 2.48
MAP1LC3A-201ENST00000360668 SIN3AQ96ST3 1273 aa30.53■■■□□ 2.48
MAP1LC3A-201ENST00000360668 TIMELESSQ9UNS1 1208 aa30.51■■■□□ 2.47
MAP1LC3A-201ENST00000360668 HECW2Q9P2P5 1572 aa30.5■■■□□ 2.47
MAP1LC3A-201ENST00000360668 RICTORQ6R327 1708 aa30.49■■■□□ 2.47
MAP1LC3A-201ENST00000360668 MAGI2Q86UL8 1455 aa30.48■■■□□ 2.47
MAP1LC3A-201ENST00000360668 NEUROD1Q13562 356 aa30.47■■■□□ 2.47
MAP1LC3A-201ENST00000360668 MYT1LQ9UL68 1186 aa30.47■■■□□ 2.47
MAP1LC3A-201ENST00000360668 DHX29Q7Z478 1369 aaKnown RBP30.45■■■□□ 2.47
MAP1LC3A-201ENST00000360668 ANKRD30BQ9BXX2 1392 aa30.45■■■□□ 2.46
MAP1LC3A-201ENST00000360668 EIF2AK4Q9P2K8 1649 aaKnown RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms