RNA–Protein interactions for RNA: ENST00000359524.7

RUNX2-201, Transcript of runt related transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene RUNX2, Length 5,390 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-201ENST00000359524 KANK1Q14678 1352 aa21.53■■□□□ 1.04
RUNX2-201ENST00000359524 HTATSF1O43719 755 aaKnown RBP21.53■■□□□ 1.04
RUNX2-201ENST00000359524 CCER2I3L3R5 266 aa21.53■■□□□ 1.04
RUNX2-201ENST00000359524 UNC13AQ9UPW8 1703 aa21.52■■□□□ 1.04
RUNX2-201ENST00000359524 GOLGA2Q08379 1002 aa21.52■■□□□ 1.04
RUNX2-201ENST00000359524 CFTRP13569 1480 aa21.52■■□□□ 1.04
RUNX2-201ENST00000359524 HMGXB3Q12766 1538 aa21.51■■□□□ 1.03
RUNX2-201ENST00000359524 CALD1Q05682 793 aaKnown RBP21.51■■□□□ 1.03
RUNX2-201ENST00000359524 PLCB2Q00722 1185 aa21.5■■□□□ 1.03
RUNX2-201ENST00000359524 IGF1RP08069 1367 aa21.5■■□□□ 1.03
RUNX2-201ENST00000359524 HIRIP3Q9BW71 556 aaPredicted RBP21.49■■□□□ 1.03
RUNX2-201ENST00000359524 KCNH8Q96L42 1107 aa21.49■■□□□ 1.03
RUNX2-201ENST00000359524 FMN1Q68DA7 1419 aa21.49■■□□□ 1.03
RUNX2-201ENST00000359524 IPO8O15397 1037 aaKnown RBP21.48■■□□□ 1.03
RUNX2-201ENST00000359524 FHOD3Q2V2M9 1422 aa21.48■■□□□ 1.03
RUNX2-201ENST00000359524 LAS1LQ9Y4W2 734 aaKnown RBP21.48■■□□□ 1.03
RUNX2-201ENST00000359524 RGS3P49796 1198 aa21.47■■□□□ 1.03
RUNX2-201ENST00000359524 FRAT1Q92837 279 aaPredicted RBP21.47■■□□□ 1.03
RUNX2-201ENST00000359524 NPHP1O15259 732 aa21.46■■□□□ 1.03
RUNX2-201ENST00000359524 USP35Q9P2H5 1018 aa21.46■■□□□ 1.03
RUNX2-201ENST00000359524 ARHGAP35Q9NRY4 1499 aa21.46■■□□□ 1.03
RUNX2-201ENST00000359524 SIN3AQ96ST3 1273 aa21.46■■□□□ 1.03
RUNX2-201ENST00000359524 HDAC5Q9UQL6 1122 aa21.45■■□□□ 1.02
RUNX2-201ENST00000359524 GBP4Q96PP9 640 aa21.45■■□□□ 1.02
RUNX2-201ENST00000359524 KIAA2012Q0VF49 1180 aa21.45■■□□□ 1.02
RUNX2-201ENST00000359524 RAD54L2Q9Y4B4 1467 aa21.44■■□□□ 1.02
RUNX2-201ENST00000359524 CCDC34Q96HJ3 373 aa21.44■■□□□ 1.02
RUNX2-201ENST00000359524 SYAP1Q96A49 352 aaPredicted RBP21.42■■□□□ 1.02
RUNX2-201ENST00000359524 CC2D2AQ9P2K1 1620 aa21.41■■□□□ 1.02
RUNX2-201ENST00000359524 NEUROD2Q15784 382 aa21.4■■□□□ 1.02
RUNX2-201ENST00000359524 SETD5Q9C0A6 1442 aa21.39■■□□□ 1.01
RUNX2-201ENST00000359524 U2SURPO15042 1029 aaKnown RBP21.38■■□□□ 1.01
RUNX2-201ENST00000359524 KIAA1211Q6ZU35 1233 aa21.37■■□□□ 1.01
RUNX2-201ENST00000359524 TPM4P67936 248 aa21.37■■□□□ 1.01
RUNX2-201ENST00000359524 DRC7Q8IY82 874 aa21.37■■□□□ 1.01
RUNX2-201ENST00000359524 KIF21BO75037 1637 aa21.37■■□□□ 1.01
RUNX2-201ENST00000359524 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
RUNX2-201ENST00000359524 NAP1L2Q9ULW6 460 aaPredicted RBP21.36■■□□□ 1.01
RUNX2-201ENST00000359524 PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
RUNX2-201ENST00000359524 CSPP1Q1MSJ5 1256 aa21.34■■□□□ 1.01
RUNX2-201ENST00000359524 RTF1Q92541 710 aaKnown RBP21.34■■□□□ 1.01
RUNX2-201ENST00000359524 GNL2Q13823 731 aaKnown RBP21.33■■□□□ 1.01
RUNX2-201ENST00000359524 RWDD1Q9H446 243 aaPredicted RBP21.33■■□□□ 1
RUNX2-201ENST00000359524 CUX1P39880 1505 aa21.33■■□□□ 1
RUNX2-201ENST00000359524 NESP48681 1621 aa21.32■■□□□ 1
RUNX2-201ENST00000359524 MORC1Q86VD1 984 aa21.32■■□□□ 1
RUNX2-201ENST00000359524 RAB3GAP2Q9H2M9 1393 aa21.32■■□□□ 1
RUNX2-201ENST00000359524 GAPVD1Q14C86 1478 aa21.31■■□□□ 1
RUNX2-201ENST00000359524 KTN1Q86UP2 1357 aaKnown RBP21.31■■□□□ 1
RUNX2-201ENST00000359524 TCERG1O14776 1098 aaKnown RBP21.31■■□□□ 1
RUNX2-201ENST00000359524 CARMIL2Q6F5E8 1435 aa21.3■■□□□ 1
RUNX2-201ENST00000359524 TULP1O00294 542 aaPredicted RBP21.29■■□□□ 1
RUNX2-201ENST00000359524 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
RUNX2-201ENST00000359524 RALBP1Q15311 655 aa21.29■■□□□ 1
RUNX2-201ENST00000359524 TPRNQ4KMQ1 711 aa21.28■■□□□ 1
RUNX2-201ENST00000359524 CC2D1BQ5T0F9 858 aaKnown RBP21.27■■□□□ 1
RUNX2-201ENST00000359524 CHMP4CQ96CF2 233 aa21.27■■□□□ 1
RUNX2-201ENST00000359524 ERICH3Q5RHP9 1530 aa21.27■□□□□ 0.99
RUNX2-201ENST00000359524 PMFBP1Q8TBY8 1022 aa21.27■□□□□ 0.99
RUNX2-201ENST00000359524 LMOD2Q6P5Q4 547 aa21.26■□□□□ 0.99
RUNX2-201ENST00000359524 PLEKHG5O94827 1062 aa21.24■□□□□ 0.99
RUNX2-201ENST00000359524 GPATCH3Q96I76 525 aa21.24■□□□□ 0.99
RUNX2-201ENST00000359524 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
RUNX2-201ENST00000359524 EIF3AQ14152 1382 aaKnown RBP21.21■□□□□ 0.99
RUNX2-201ENST00000359524 HMMRO75330 724 aa21.21■□□□□ 0.99
RUNX2-201ENST00000359524 SRPK2P78362 688 aaKnown RBP21.2■□□□□ 0.98
RUNX2-201ENST00000359524 KIF3AQ9Y496 699 aa21.2■□□□□ 0.98
RUNX2-201ENST00000359524 DCAF11Q8TEB1 546 aa21.2■□□□□ 0.98
RUNX2-201ENST00000359524 GOLGA6L1Q8N7Z2 621 aa21.2■□□□□ 0.98
RUNX2-201ENST00000359524 B4GALNT3Q6L9W6 998 aa21.19■□□□□ 0.98
RUNX2-201ENST00000359524 JPH4Q96JJ6 628 aa21.19■□□□□ 0.98
RUNX2-201ENST00000359524 PHF14O94880 888 aa21.18■□□□□ 0.98
RUNX2-201ENST00000359524 NOC3LQ8WTT2 800 aaKnown RBP21.17■□□□□ 0.98
RUNX2-201ENST00000359524 CLSTN1O94985 981 aa21.17■□□□□ 0.98
RUNX2-201ENST00000359524 PHLDB1Q86UU1 1377 aa21.17■□□□□ 0.98
RUNX2-201ENST00000359524 PDE3BQ13370 1112 aa21.17■□□□□ 0.98
RUNX2-201ENST00000359524 ARAP1Q96P48 1450 aa21.16■□□□□ 0.98
RUNX2-201ENST00000359524 TOPBP1Q92547 1522 aa21.16■□□□□ 0.98
RUNX2-201ENST00000359524 AQRO60306 1485 aaKnown RBP eCLIP21.16■□□□□ 0.98
RUNX2-201ENST00000359524 DEKP35659 375 aaKnown RBP21.15■□□□□ 0.98
RUNX2-201ENST00000359524 TMX4Q9H1E5 349 aaPredicted RBP21.15■□□□□ 0.98
RUNX2-201ENST00000359524 LMOD3Q0VAK6 560 aa21.14■□□□□ 0.98
RUNX2-201ENST00000359524 SPAG9O60271 1321 aaKnown RBP21.14■□□□□ 0.97
RUNX2-201ENST00000359524 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
RUNX2-201ENST00000359524 STK31Q9BXU1 1019 aa21.12■□□□□ 0.97
RUNX2-201ENST00000359524 RCAN3Q9UKA8 241 aa21.12■□□□□ 0.97
RUNX2-201ENST00000359524 ROCK2O75116 1388 aaKnown RBP21.12■□□□□ 0.97
RUNX2-201ENST00000359524 DHX57Q6P158 1386 aaKnown RBP21.12■□□□□ 0.97
RUNX2-201ENST00000359524 GOLGA6L3A6NEY3 463 aa21.1■□□□□ 0.97
RUNX2-201ENST00000359524 CCDC18Q5T9S5 1454 aa21.09■□□□□ 0.97
RUNX2-201ENST00000359524 FOXD1Q16676 465 aa21.09■□□□□ 0.97
RUNX2-201ENST00000359524 TAOK2Q9UL54 1235 aa21.08■□□□□ 0.97
RUNX2-201ENST00000359524 TNNT3P45378 269 aaPredicted RBP21.07■□□□□ 0.96
RUNX2-201ENST00000359524 RTN4Q9NQC3 1192 aaKnown RBP21.07■□□□□ 0.96
RUNX2-201ENST00000359524 ISY1Q9ULR0 285 aaKnown RBP21.07■□□□□ 0.96
RUNX2-201ENST00000359524 MPHOSPH9Q99550 1183 aa21.05■□□□□ 0.96
RUNX2-201ENST00000359524 TPM3P06753 285 aa21.05■□□□□ 0.96
RUNX2-201ENST00000359524 HSPA5P11021 654 aaKnown RBP21.05■□□□□ 0.96
RUNX2-201ENST00000359524 RBM19Q9Y4C8 960 aaKnown RBP21.05■□□□□ 0.96
RUNX2-201ENST00000359524 DNMBPQ6XZF7 1577 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms