RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 BCANQ96GW7 911 aa24.89■■□□□ 1.58
CDK11A-204ENST00000358779 WASHC2AQ641Q2 1341 aa24.88■■□□□ 1.57
CDK11A-204ENST00000358779 NEFLP07196 543 aa24.85■■□□□ 1.57
CDK11A-204ENST00000358779 EIF4G2P78344 907 aaKnown RBP eCLIP24.85■■□□□ 1.57
CDK11A-204ENST00000358779 RPRD2Q5VT52 1461 aaKnown RBP24.85■■□□□ 1.57
CDK11A-204ENST00000358779 FOXD1Q16676 465 aa24.84■■□□□ 1.57
CDK11A-204ENST00000358779 L3MBTL2Q969R5 705 aa24.84■■□□□ 1.57
CDK11A-204ENST00000358779 ITSN2Q9NZM3 1697 aa24.84■■□□□ 1.57
CDK11A-204ENST00000358779 ANKRD30BQ9BXX2 1392 aa24.84■■□□□ 1.57
CDK11A-204ENST00000358779 CDK11AQ9UQ88 783 aaPredicted RBP24.83■■□□□ 1.56
CDK11A-204ENST00000358779 TEX14Q8IWB6 1497 aa24.82■■□□□ 1.56
CDK11A-204ENST00000358779 ZNF644Q9H582 1327 aaPredicted RBP24.82■■□□□ 1.56
CDK11A-204ENST00000358779 ADGBQ8N7X0 1667 aa24.81■■□□□ 1.56
CDK11A-204ENST00000358779 CNTLNQ9NXG0 1405 aa24.81■■□□□ 1.56
CDK11A-204ENST00000358779 TROQ12816 1431 aaPredicted RBP24.81■■□□□ 1.56
CDK11A-204ENST00000358779 MAGI1Q96QZ7 1491 aaPredicted RBP24.8■■□□□ 1.56
CDK11A-204ENST00000358779 ADCY10Q96PN6 1610 aa24.79■■□□□ 1.56
CDK11A-204ENST00000358779 CEP170Q5SW79 1584 aa24.79■■□□□ 1.56
CDK11A-204ENST00000358779 CAMSAP2Q08AD1 1489 aa24.79■■□□□ 1.56
CDK11A-204ENST00000358779 PRG4Q92954 1404 aaPredicted RBP24.77■■□□□ 1.56
CDK11A-204ENST00000358779 NCOA1Q15788 1441 aa24.77■■□□□ 1.56
CDK11A-204ENST00000358779 CROCC2H7BZ55 1655 aa24.77■■□□□ 1.56
CDK11A-204ENST00000358779 POLR1AO95602 1720 aaPredicted RBP24.75■■□□□ 1.55
CDK11A-204ENST00000358779 KIF14Q15058 1648 aa24.75■■□□□ 1.55
CDK11A-204ENST00000358779 PLB1Q6P1J6 1458 aa24.74■■□□□ 1.55
CDK11A-204ENST00000358779 SYNJ2O15056 1496 aa24.73■■□□□ 1.55
CDK11A-204ENST00000358779 CCDC7Q96M83 1385 aa24.73■■□□□ 1.55
CDK11A-204ENST00000358779 SLC4A1APQ9BWU0 796 aaKnown RBP24.73■■□□□ 1.55
CDK11A-204ENST00000358779 PZPP20742 1482 aa24.72■■□□□ 1.55
CDK11A-204ENST00000358779 HNRNPUQ00839 825 aaKnown RBP eCLIP24.71■■□□□ 1.55
CDK11A-204ENST00000358779 NBPF8Q3BBV2 869 aa24.71■■□□□ 1.55
CDK11A-204ENST00000358779 GPATCH8Q9UKJ3 1502 aaKnown RBP24.71■■□□□ 1.55
CDK11A-204ENST00000358779 ERCC6Q03468 1493 aa24.7■■□□□ 1.54
CDK11A-204ENST00000358779 ADGRL2O95490 1459 aa24.69■■□□□ 1.54
CDK11A-204ENST00000358779 CFDP1Q9UEE9 299 aaPredicted RBP24.69■■□□□ 1.54
CDK11A-204ENST00000358779 C11orf95C9JLR9 678 aaPredicted RBP24.67■■□□□ 1.54
CDK11A-204ENST00000358779 CHMP7Q8WUX9 453 aaPredicted RBP24.67■■□□□ 1.54
CDK11A-204ENST00000358779 CARMIL2Q6F5E8 1435 aa24.66■■□□□ 1.54
CDK11A-204ENST00000358779 SPATA31E1Q6ZUB1 1445 aa24.66■■□□□ 1.54
CDK11A-204ENST00000358779 NUP160Q12769 1436 aa24.64■■□□□ 1.53
CDK11A-204ENST00000358779 MBD5Q9P267 1494 aa24.62■■□□□ 1.53
CDK11A-204ENST00000358779 CDC42BPAQ5VT25 1732 aa24.61■■□□□ 1.53
CDK11A-204ENST00000358779 KIAA1107Q9UPP5 1409 aa24.61■■□□□ 1.53
CDK11A-204ENST00000358779 PRKRIP1Q9H875 184 aaPredicted RBP24.6■■□□□ 1.53
CDK11A-204ENST00000358779 ZNF777Q9ULD5 760 aaPredicted RBP24.59■■□□□ 1.53
CDK11A-204ENST00000358779 KIF7Q2M1P5 1343 aa24.58■■□□□ 1.53
CDK11A-204ENST00000358779 ANKRD30AQ9BXX3 1397 aa24.58■■□□□ 1.53
CDK11A-204ENST00000358779 ABCA8O94911 1581 aa24.58■■□□□ 1.52
CDK11A-204ENST00000358779 CCDC184Q52MB2 194 aa24.57■■□□□ 1.52
CDK11A-204ENST00000358779 FBLN2P98095 1184 aa24.56■■□□□ 1.52
CDK11A-204ENST00000358779 JPH4Q96JJ6 628 aa24.55■■□□□ 1.52
CDK11A-204ENST00000358779 SHANK2Q9UPX8 1470 aa24.54■■□□□ 1.52
CDK11A-204ENST00000358779 ABCC10Q5T3U5 1492 aa24.53■■□□□ 1.52
CDK11A-204ENST00000358779 ANKRD50Q9ULJ7 1429 aa24.53■■□□□ 1.52
CDK11A-204ENST00000358779 MRS2Q9HD23 443 aa24.5■■□□□ 1.51
CDK11A-204ENST00000358779 PKD2Q13563 968 aa24.5■■□□□ 1.51
CDK11A-204ENST00000358779 BCORL1Q5H9F3 1711 aa24.49■■□□□ 1.51
CDK11A-204ENST00000358779 ATP10BO94823 1461 aa24.48■■□□□ 1.51
CDK11A-204ENST00000358779 KDM5CP41229 1560 aa24.48■■□□□ 1.51
CDK11A-204ENST00000358779 C9orf84Q5VXU9 1444 aa24.48■■□□□ 1.51
CDK11A-204ENST00000358779 PLEKHD1A6NEE1 506 aa24.47■■□□□ 1.51
CDK11A-204ENST00000358779 USP47Q96K76 1375 aa24.46■■□□□ 1.51
CDK11A-204ENST00000358779 FAM9BQ8IZU0 186 aa24.46■■□□□ 1.51
CDK11A-204ENST00000358779 KDM5DQ9BY66 1539 aa24.46■■□□□ 1.51
CDK11A-204ENST00000358779 IRX6P78412 446 aaPredicted RBP24.44■■□□□ 1.5
CDK11A-204ENST00000358779 RBM19Q9Y4C8 960 aaKnown RBP24.43■■□□□ 1.5
CDK11A-204ENST00000358779 ZBED9Q6R2W3 1325 aa24.43■■□□□ 1.5
CDK11A-204ENST00000358779 UHRF1BP1Q6BDS2 1440 aa24.42■■□□□ 1.5
CDK11A-204ENST00000358779 ARHGEF5Q12774 1597 aa24.41■■□□□ 1.5
CDK11A-204ENST00000358779 ZNF326Q5BKZ1 582 aaKnown RBP24.41■■□□□ 1.5
CDK11A-204ENST00000358779 DHX29Q7Z478 1369 aaKnown RBP24.41■■□□□ 1.5
CDK11A-204ENST00000358779 ARHGEF12Q9NZN5 1544 aa24.41■■□□□ 1.5
CDK11A-204ENST00000358779 NUP155O75694 1391 aa24.41■■□□□ 1.5
CDK11A-204ENST00000358779 RALGAPBQ86X10 1494 aa24.41■■□□□ 1.5
CDK11A-204ENST00000358779 ANP32EQ9BTT0 268 aa24.39■■□□□ 1.5
CDK11A-204ENST00000358779 ERICH6BQ5W0A0 696 aa24.39■■□□□ 1.49
CDK11A-204ENST00000358779 ARID4BQ4LE39 1312 aaPredicted RBP24.36■■□□□ 1.49
CDK11A-204ENST00000358779 KIF15Q9NS87 1388 aa24.35■■□□□ 1.49
CDK11A-204ENST00000358779 PTPRGP23470 1445 aa24.34■■□□□ 1.49
CDK11A-204ENST00000358779 PREX2Q70Z35 1606 aa24.34■■□□□ 1.49
CDK11A-204ENST00000358779 TSPY4P0CV99 314 aa24.34■■□□□ 1.49
CDK11A-204ENST00000358779 TSPY10P0CW01 314 aa24.34■■□□□ 1.49
CDK11A-204ENST00000358779 CDC42BPBQ9Y5S2 1711 aa24.33■■□□□ 1.49
CDK11A-204ENST00000358779 SAMD9LQ8IVG5 1584 aa24.33■■□□□ 1.49
CDK11A-204ENST00000358779 POLR3GLQ9BT43 218 aa24.31■■□□□ 1.48
CDK11A-204ENST00000358779 CCDC141Q6ZP82 1450 aa24.3■■□□□ 1.48
CDK11A-204ENST00000358779 PPP4R2Q9NY27 417 aa24.3■■□□□ 1.48
CDK11A-204ENST00000358779 ROCK2O75116 1388 aaKnown RBP24.29■■□□□ 1.48
CDK11A-204ENST00000358779 HNRNPMP52272 730 aaKnown RBP eCLIP24.29■■□□□ 1.48
CDK11A-204ENST00000358779 CARD11Q9BXL7 1154 aa24.26■■□□□ 1.47
CDK11A-204ENST00000358779 FAM135AQ9P2D6 1515 aa24.26■■□□□ 1.47
CDK11A-204ENST00000358779 SMG6Q86US8 1419 aaKnown RBP24.22■■□□□ 1.47
CDK11A-204ENST00000358779 E9PCH4 1651 aa24.22■■□□□ 1.47
CDK11A-204ENST00000358779 CNGB1Q14028 1251 aaPredicted RBP24.22■■□□□ 1.47
CDK11A-204ENST00000358779 CHD1O14646 1710 aa24.21■■□□□ 1.47
CDK11A-204ENST00000358779 MAST1Q9Y2H9 1570 aa24.2■■□□□ 1.46
CDK11A-204ENST00000358779 SYCP2Q9BX26 1530 aa24.2■■□□□ 1.46
CDK11A-204ENST00000358779 KDM2AQ9Y2K7 1162 aa24.2■■□□□ 1.46
CDK11A-204ENST00000358779 UNC13BO14795 1591 aa24.19■■□□□ 1.46
CDK11A-204ENST00000358779 TTC37Q6PGP7 1564 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms