RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 CLIP1P30622 1438 aa16.95■□□□□ 0.3
SNU13-202ENST00000355257 MADDQ8WXG6 1647 aa16.94■□□□□ 0.3
SNU13-202ENST00000355257 PCF11O94913 1555 aaKnown RBP16.93■□□□□ 0.3
SNU13-202ENST00000355257 PTPRMP28827 1452 aa16.93■□□□□ 0.3
SNU13-202ENST00000355257 TROQ12816 1431 aaPredicted RBP16.91■□□□□ 0.3
SNU13-202ENST00000355257 ZFYVE16Q7Z3T8 1539 aa16.9■□□□□ 0.3
SNU13-202ENST00000355257 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
SNU13-202ENST00000355257 YEATS2Q9ULM3 1422 aa16.9■□□□□ 0.3
SNU13-202ENST00000355257 CDC42BPBQ9Y5S2 1711 aa16.9■□□□□ 0.3
SNU13-202ENST00000355257 POGZQ7Z3K3 1410 aa16.89■□□□□ 0.29
SNU13-202ENST00000355257 RIMS1Q86UR5 1692 aaKnown RBP16.88■□□□□ 0.29
SNU13-202ENST00000355257 MAGI2Q86UL8 1455 aa16.88■□□□□ 0.29
SNU13-202ENST00000355257 CASKIN1Q8WXD9 1431 aa16.88■□□□□ 0.29
SNU13-202ENST00000355257 SCAPERQ9BY12 1400 aa16.88■□□□□ 0.29
SNU13-202ENST00000355257 ATP1B4Q9UN42 357 aaPredicted RBP16.86■□□□□ 0.29
SNU13-202ENST00000355257 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
SNU13-202ENST00000355257 PREX2Q70Z35 1606 aa16.85■□□□□ 0.29
SNU13-202ENST00000355257 KDM5CP41229 1560 aa16.84■□□□□ 0.29
SNU13-202ENST00000355257 CCDC18Q5T9S5 1454 aa16.84■□□□□ 0.29
SNU13-202ENST00000355257 CDC42BPAQ5VT25 1732 aa16.83■□□□□ 0.28
SNU13-202ENST00000355257 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
SNU13-202ENST00000355257 ARID4BQ4LE39 1312 aaPredicted RBP16.81■□□□□ 0.28
SNU13-202ENST00000355257 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
SNU13-202ENST00000355257 FYCO1Q9BQS8 1478 aa16.81■□□□□ 0.28
SNU13-202ENST00000355257 FER1L4A9Z1Z3 1794 aa16.81■□□□□ 0.28
SNU13-202ENST00000355257 ITSN2Q9NZM3 1697 aa16.79■□□□□ 0.28
SNU13-202ENST00000355257 ATP10AO60312 1499 aa16.79■□□□□ 0.28
SNU13-202ENST00000355257 ZNF518AQ6AHZ1 1483 aa16.79■□□□□ 0.28
SNU13-202ENST00000355257 LMTK3Q96Q04 1460 aa16.79■□□□□ 0.28
SNU13-202ENST00000355257 ABCC1P33527 1531 aa16.78■□□□□ 0.28
SNU13-202ENST00000355257 ARHGEF12Q9NZN5 1544 aa16.78■□□□□ 0.28
SNU13-202ENST00000355257 C9orf84Q5VXU9 1444 aa16.77■□□□□ 0.28
SNU13-202ENST00000355257 DIP2CQ9Y2E4 1556 aa16.77■□□□□ 0.28
SNU13-202ENST00000355257 ABCA6Q8N139 1617 aa16.76■□□□□ 0.27
SNU13-202ENST00000355257 REREQ9P2R6 1566 aa16.75■□□□□ 0.27
SNU13-202ENST00000355257 ILDR1Q86SU0 546 aaPredicted RBP16.75■□□□□ 0.27
SNU13-202ENST00000355257 MLH3Q9UHC1 1453 aa16.73■□□□□ 0.27
SNU13-202ENST00000355257 AFAP1Q8N556 730 aa16.73■□□□□ 0.27
SNU13-202ENST00000355257 KIDINS220Q9ULH0 1771 aa16.73■□□□□ 0.27
SNU13-202ENST00000355257 TRAPPC8Q9Y2L5 1435 aa16.72■□□□□ 0.27
SNU13-202ENST00000355257 SAMD9LQ8IVG5 1584 aa16.72■□□□□ 0.27
SNU13-202ENST00000355257 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
SNU13-202ENST00000355257 GPATCH8Q9UKJ3 1502 aaKnown RBP16.69■□□□□ 0.26
SNU13-202ENST00000355257 APLP2Q06481 763 aa16.69■□□□□ 0.26
SNU13-202ENST00000355257 MLECQ14165 292 aa16.68■□□□□ 0.26
SNU13-202ENST00000355257 AGLP35573 1532 aa16.67■□□□□ 0.26
SNU13-202ENST00000355257 PREX1Q8TCU6 1659 aa16.67■□□□□ 0.26
SNU13-202ENST00000355257 SYCP2Q9BX26 1530 aa16.65■□□□□ 0.26
SNU13-202ENST00000355257 C3P01024 1663 aa16.64■□□□□ 0.25
SNU13-202ENST00000355257 TIAM1Q13009 1591 aa16.62■□□□□ 0.25
SNU13-202ENST00000355257 INO80Q9ULG1 1556 aaPredicted RBP16.62■□□□□ 0.25
SNU13-202ENST00000355257 SETD1BQ9UPS6 1966 aaKnown RBP16.61■□□□□ 0.25
SNU13-202ENST00000355257 HSPA2P54652 639 aa16.61■□□□□ 0.25
SNU13-202ENST00000355257 EHBP1L1Q8N3D4 1523 aa16.6■□□□□ 0.25
SNU13-202ENST00000355257 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
SNU13-202ENST00000355257 KIAA1107Q9UPP5 1409 aa16.59■□□□□ 0.25
SNU13-202ENST00000355257 CEBPAP49715 358 aaPredicted RBP16.59■□□□□ 0.25
SNU13-202ENST00000355257 ATP7AQ04656 1500 aa16.58■□□□□ 0.24
SNU13-202ENST00000355257 STRCQ7RTU9 1775 aa16.58■□□□□ 0.24
SNU13-202ENST00000355257 PLXNC1O60486 1568 aa16.58■□□□□ 0.24
SNU13-202ENST00000355257 SUPT6HQ7KZ85 1726 aaKnown RBP16.57■□□□□ 0.24
SNU13-202ENST00000355257 PLEKHH2Q8IVE3 1493 aa16.57■□□□□ 0.24
SNU13-202ENST00000355257 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
SNU13-202ENST00000355257 ZNF777Q9ULD5 760 aaPredicted RBP16.56■□□□□ 0.24
SNU13-202ENST00000355257 CCNB3Q8WWL7 1395 aa16.56■□□□□ 0.24
SNU13-202ENST00000355257 MROH2AA6NES4 1674 aa16.56■□□□□ 0.24
SNU13-202ENST00000355257 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.24
SNU13-202ENST00000355257 MYT1LQ9UL68 1186 aa16.55■□□□□ 0.24
SNU13-202ENST00000355257 MAP3K1Q13233 1512 aa16.55■□□□□ 0.24
SNU13-202ENST00000355257 MBD5Q9P267 1494 aa16.54■□□□□ 0.24
SNU13-202ENST00000355257 CFDP1Q9UEE9 299 aaPredicted RBP16.53■□□□□ 0.24
SNU13-202ENST00000355257 ADGBQ8N7X0 1667 aa16.53■□□□□ 0.24
SNU13-202ENST00000355257 RRBP1Q9P2E9 1410 aaKnown RBP16.52■□□□□ 0.23
SNU13-202ENST00000355257 SPAG9O60271 1321 aaKnown RBP16.52■□□□□ 0.23
SNU13-202ENST00000355257 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
SNU13-202ENST00000355257 FBXO41Q8TF61 875 aa16.51■□□□□ 0.23
SNU13-202ENST00000355257 CNTLNQ9NXG0 1405 aa16.5■□□□□ 0.23
SNU13-202ENST00000355257 ZNF644Q9H582 1327 aaPredicted RBP16.5■□□□□ 0.23
SNU13-202ENST00000355257 CLTCQ00610 1675 aaKnown RBP16.5■□□□□ 0.23
SNU13-202ENST00000355257 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
SNU13-202ENST00000355257 A2MP01023 1474 aa16.49■□□□□ 0.23
SNU13-202ENST00000355257 NCOA2Q15596 1464 aa16.49■□□□□ 0.23
SNU13-202ENST00000355257 RTEL1-TNFRSF6BF6WH68 1400 aa16.45■□□□□ 0.22
SNU13-202ENST00000355257 CAMSAP2Q08AD1 1489 aa16.45■□□□□ 0.22
SNU13-202ENST00000355257 NPATQ14207 1427 aa16.43■□□□□ 0.22
SNU13-202ENST00000355257 ZNF142P52746 1687 aaPredicted RBP16.43■□□□□ 0.22
SNU13-202ENST00000355257 CLSPNQ9HAW4 1339 aa16.43■□□□□ 0.22
SNU13-202ENST00000355257 ZMYM3Q14202 1370 aa16.42■□□□□ 0.22
SNU13-202ENST00000355257 CCDC141Q6ZP82 1450 aa16.42■□□□□ 0.22
SNU13-202ENST00000355257 LRRC9Q6ZRR7 1453 aa16.42■□□□□ 0.22
SNU13-202ENST00000355257 ARHGEF5Q12774 1597 aa16.42■□□□□ 0.22
SNU13-202ENST00000355257 MYO3AQ8NEV4 1616 aa16.42■□□□□ 0.22
SNU13-202ENST00000355257 ESF1Q9H501 851 aaKnown RBP16.41■□□□□ 0.22
SNU13-202ENST00000355257 PTPRTO14522 1441 aa16.39■□□□□ 0.21
SNU13-202ENST00000355257 PTPRKQ15262 1439 aa16.39■□□□□ 0.21
SNU13-202ENST00000355257 NCOA1Q15788 1441 aa16.39■□□□□ 0.21
SNU13-202ENST00000355257 CERKQ8TCT0 537 aa16.39■□□□□ 0.21
SNU13-202ENST00000355257 DHX29Q7Z478 1369 aaKnown RBP16.38■□□□□ 0.21
SNU13-202ENST00000355257 CAMSAP1Q5T5Y3 1602 aa16.37■□□□□ 0.21
SNU13-202ENST00000355257 MAST1Q9Y2H9 1570 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms