RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 CDC42BPBQ9Y5S2 1711 aa26.32■■□□□ 1.8
PDGFA-201ENST00000354513 FER1L4A9Z1Z3 1794 aa26.28■■□□□ 1.8
PDGFA-201ENST00000354513 TROQ12816 1431 aaPredicted RBP26.28■■□□□ 1.8
PDGFA-201ENST00000354513 MAGI2Q86UL8 1455 aa26.28■■□□□ 1.8
PDGFA-201ENST00000354513 ILDR1Q86SU0 546 aaPredicted RBP26.27■■□□□ 1.8
PDGFA-201ENST00000354513 SCAPERQ9BY12 1400 aa26.27■■□□□ 1.8
PDGFA-201ENST00000354513 PREX2Q70Z35 1606 aa26.24■■□□□ 1.79
PDGFA-201ENST00000354513 KDM5CP41229 1560 aa26.23■■□□□ 1.79
PDGFA-201ENST00000354513 LMTK3Q96Q04 1460 aa26.23■■□□□ 1.79
PDGFA-201ENST00000354513 ARID4BQ4LE39 1312 aaPredicted RBP26.22■■□□□ 1.79
PDGFA-201ENST00000354513 ATP1B4Q9UN42 357 aaPredicted RBP26.22■■□□□ 1.79
PDGFA-201ENST00000354513 CDC42BPAQ5VT25 1732 aa26.21■■□□□ 1.79
PDGFA-201ENST00000354513 ARHGAP5Q13017 1502 aa26.2■■□□□ 1.79
PDGFA-201ENST00000354513 CASKIN1Q8WXD9 1431 aa26.19■■□□□ 1.78
PDGFA-201ENST00000354513 ITSN2Q9NZM3 1697 aa26.18■■□□□ 1.78
PDGFA-201ENST00000354513 ARHGEF12Q9NZN5 1544 aa26.16■■□□□ 1.78
PDGFA-201ENST00000354513 CCDC18Q5T9S5 1454 aa26.16■■□□□ 1.78
PDGFA-201ENST00000354513 CLIP1P30622 1438 aa26.16■■□□□ 1.78
PDGFA-201ENST00000354513 DIP2CQ9Y2E4 1556 aa26.15■■□□□ 1.78
PDGFA-201ENST00000354513 ABCA6Q8N139 1617 aa26.15■■□□□ 1.78
PDGFA-201ENST00000354513 ABCC1P33527 1531 aa26.14■■□□□ 1.77
PDGFA-201ENST00000354513 CDK11AQ9UQ88 783 aaPredicted RBP26.14■■□□□ 1.77
PDGFA-201ENST00000354513 ATP10AO60312 1499 aa26.13■■□□□ 1.77
PDGFA-201ENST00000354513 ZNF518AQ6AHZ1 1483 aa26.13■■□□□ 1.77
PDGFA-201ENST00000354513 C9orf84Q5VXU9 1444 aa26.13■■□□□ 1.77
PDGFA-201ENST00000354513 FYCO1Q9BQS8 1478 aa26.13■■□□□ 1.77
PDGFA-201ENST00000354513 EFCAB2Q5VUJ9 269 aa26.13■■□□□ 1.77
PDGFA-201ENST00000354513 REREQ9P2R6 1566 aa26.1■■□□□ 1.77
PDGFA-201ENST00000354513 KIDINS220Q9ULH0 1771 aa26.06■■□□□ 1.76
PDGFA-201ENST00000354513 PREX1Q8TCU6 1659 aa26.04■■□□□ 1.76
PDGFA-201ENST00000354513 SAMD9LQ8IVG5 1584 aa26.03■■□□□ 1.76
PDGFA-201ENST00000354513 TRAPPC8Q9Y2L5 1435 aa26.03■■□□□ 1.76
PDGFA-201ENST00000354513 MLECQ14165 292 aa26.02■■□□□ 1.76
PDGFA-201ENST00000354513 AFAP1Q8N556 730 aa26.02■■□□□ 1.76
PDGFA-201ENST00000354513 MLH3Q9UHC1 1453 aa26.02■■□□□ 1.76
PDGFA-201ENST00000354513 C3P01024 1663 aa25.97■■□□□ 1.75
PDGFA-201ENST00000354513 AGLP35573 1532 aa25.95■■□□□ 1.75
PDGFA-201ENST00000354513 PLPPR3Q6T4P5 718 aa25.95■■□□□ 1.75
PDGFA-201ENST00000354513 HSPA2P54652 639 aa25.94■■□□□ 1.74
PDGFA-201ENST00000354513 SYCP2Q9BX26 1530 aa25.94■■□□□ 1.74
PDGFA-201ENST00000354513 GPATCH8Q9UKJ3 1502 aaKnown RBP25.94■■□□□ 1.74
PDGFA-201ENST00000354513 STRCQ7RTU9 1775 aa25.9■■□□□ 1.74
PDGFA-201ENST00000354513 INO80Q9ULG1 1556 aaPredicted RBP25.89■■□□□ 1.74
PDGFA-201ENST00000354513 TIAM1Q13009 1591 aa25.86■■□□□ 1.73
PDGFA-201ENST00000354513 CEBPAP49715 358 aaPredicted RBP25.86■■□□□ 1.73
PDGFA-201ENST00000354513 SUPT6HQ7KZ85 1726 aaKnown RBP25.85■■□□□ 1.73
PDGFA-201ENST00000354513 PLXNC1O60486 1568 aa25.83■■□□□ 1.73
PDGFA-201ENST00000354513 SETD1BQ9UPS6 1966 aaKnown RBP25.83■■□□□ 1.73
PDGFA-201ENST00000354513 FBXO41Q8TF61 875 aa25.83■■□□□ 1.73
PDGFA-201ENST00000354513 MROH2AA6NES4 1674 aa25.83■■□□□ 1.73
PDGFA-201ENST00000354513 ATP7AQ04656 1500 aa25.83■■□□□ 1.72
PDGFA-201ENST00000354513 EHBP1L1Q8N3D4 1523 aa25.81■■□□□ 1.72
PDGFA-201ENST00000354513 MYT1LQ9UL68 1186 aa25.8■■□□□ 1.72
PDGFA-201ENST00000354513 CEP162Q5TB80 1403 aa25.77■■□□□ 1.72
PDGFA-201ENST00000354513 KIAA1107Q9UPP5 1409 aa25.77■■□□□ 1.72
PDGFA-201ENST00000354513 CLTCQ00610 1675 aaKnown RBP25.75■■□□□ 1.71
PDGFA-201ENST00000354513 ADGBQ8N7X0 1667 aa25.75■■□□□ 1.71
PDGFA-201ENST00000354513 ZNF777Q9ULD5 760 aaPredicted RBP25.75■■□□□ 1.71
PDGFA-201ENST00000354513 PLEKHH2Q8IVE3 1493 aa25.74■■□□□ 1.71
PDGFA-201ENST00000354513 UHRF1BP1Q6BDS2 1440 aa25.74■■□□□ 1.71
PDGFA-201ENST00000354513 MTUS2Q5JR59 1369 aa25.73■■□□□ 1.71
PDGFA-201ENST00000354513 HNRNPMP52272 730 aaKnown RBP eCLIP25.73■■□□□ 1.71
PDGFA-201ENST00000354513 CCNB3Q8WWL7 1395 aa25.72■■□□□ 1.71
PDGFA-201ENST00000354513 CNTLNQ9NXG0 1405 aa25.69■■□□□ 1.7
PDGFA-201ENST00000354513 SPAG9O60271 1321 aaKnown RBP25.69■■□□□ 1.7
PDGFA-201ENST00000354513 MBD5Q9P267 1494 aa25.69■■□□□ 1.7
PDGFA-201ENST00000354513 A2MP01023 1474 aa25.68■■□□□ 1.7
PDGFA-201ENST00000354513 CFDP1Q9UEE9 299 aaPredicted RBP25.67■■□□□ 1.7
PDGFA-201ENST00000354513 ZNF142P52746 1687 aaPredicted RBP25.65■■□□□ 1.7
PDGFA-201ENST00000354513 MYO3AQ8NEV4 1616 aa25.64■■□□□ 1.7
PDGFA-201ENST00000354513 ZNF644Q9H582 1327 aaPredicted RBP25.64■■□□□ 1.7
PDGFA-201ENST00000354513 NCOA2Q15596 1464 aa25.61■■□□□ 1.69
PDGFA-201ENST00000354513 NPATQ14207 1427 aa25.6■■□□□ 1.69
PDGFA-201ENST00000354513 CERKQ8TCT0 537 aa25.59■■□□□ 1.69
PDGFA-201ENST00000354513 CAMSAP2Q08AD1 1489 aa25.58■■□□□ 1.69
PDGFA-201ENST00000354513 NCOA1Q15788 1441 aa25.57■■□□□ 1.68
PDGFA-201ENST00000354513 ZMYM3Q14202 1370 aa25.56■■□□□ 1.68
PDGFA-201ENST00000354513 ESF1Q9H501 851 aaKnown RBP25.56■■□□□ 1.68
PDGFA-201ENST00000354513 CAMSAP1Q5T5Y3 1602 aa25.56■■□□□ 1.68
PDGFA-201ENST00000354513 PTPRTO14522 1441 aa25.55■■□□□ 1.68
PDGFA-201ENST00000354513 RTEL1-TNFRSF6BF6WH68 1400 aa25.55■■□□□ 1.68
PDGFA-201ENST00000354513 LTBP4Q8N2S1 1624 aa25.53■■□□□ 1.68
PDGFA-201ENST00000354513 PTPRKQ15262 1439 aa25.53■■□□□ 1.68
PDGFA-201ENST00000354513 CCDC141Q6ZP82 1450 aa25.53■■□□□ 1.68
PDGFA-201ENST00000354513 ARHGEF5Q12774 1597 aa25.53■■□□□ 1.68
PDGFA-201ENST00000354513 CEP170BQ9Y4F5 1589 aaPredicted RBP25.53■■□□□ 1.68
PDGFA-201ENST00000354513 VPS8Q8N3P4 1428 aa25.5■■□□□ 1.67
PDGFA-201ENST00000354513 LRRC9Q6ZRR7 1453 aa25.48■■□□□ 1.67
PDGFA-201ENST00000354513 DMRT2Q9Y5R5 561 aa25.47■■□□□ 1.67
PDGFA-201ENST00000354513 DHX29Q7Z478 1369 aaKnown RBP25.45■■□□□ 1.66
PDGFA-201ENST00000354513 GGT6Q6P531 493 aa25.44■■□□□ 1.66
PDGFA-201ENST00000354513 MAST1Q9Y2H9 1570 aa25.43■■□□□ 1.66
PDGFA-201ENST00000354513 LOC105371045A0A1W2PR82 267 aa25.43■■□□□ 1.66
PDGFA-201ENST00000354513 FAM135AQ9P2D6 1515 aa25.42■■□□□ 1.66
PDGFA-201ENST00000354513 DNMT1P26358 1616 aaKnown RBP25.42■■□□□ 1.66
PDGFA-201ENST00000354513 PLA2R1Q13018 1463 aa25.42■■□□□ 1.66
PDGFA-201ENST00000354513 MAP3K1Q13233 1512 aa25.41■■□□□ 1.66
PDGFA-201ENST00000354513 KDM5DQ9BY66 1539 aa25.41■■□□□ 1.66
PDGFA-201ENST00000354513 RNF17Q9BXT8 1623 aaKnown RBP25.41■■□□□ 1.66
PDGFA-201ENST00000354513 POLR1AO95602 1720 aaPredicted RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms