RNA–Protein interactions for RNA: ENST00000352105.11

ACAN-201, Transcript of aggrecan, humanhuman

TSL 5 BASIC

Gene ACAN, Length 7,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAN-201ENST00000352105 TPM4P67936 248 aa13.72□□□□□ -0.21
ACAN-201ENST00000352105 APBB1O00213 710 aa13.71□□□□□ -0.21
ACAN-201ENST00000352105 CCER2I3L3R5 266 aa13.71□□□□□ -0.21
ACAN-201ENST00000352105 CALD1Q05682 793 aaKnown RBP13.7□□□□□ -0.22
ACAN-201ENST00000352105 HTATSF1O43719 755 aaKnown RBP13.69□□□□□ -0.22
ACAN-201ENST00000352105 SETQ01105 290 aaPredicted RBP13.69□□□□□ -0.22
ACAN-201ENST00000352105 POGKQ9P215 609 aa13.68□□□□□ -0.22
ACAN-201ENST00000352105 GOLGA3Q08378 1498 aa13.68□□□□□ -0.22
ACAN-201ENST00000352105 RCAN3Q9UKA8 241 aa13.68□□□□□ -0.22
ACAN-201ENST00000352105 MFAP1P55081 439 aaKnown RBP13.67□□□□□ -0.22
ACAN-201ENST00000352105 KCNH8Q96L42 1107 aa13.67□□□□□ -0.22
ACAN-201ENST00000352105 ISY1Q9ULR0 285 aaKnown RBP13.66□□□□□ -0.22
ACAN-201ENST00000352105 TMF1P82094 1093 aa13.65□□□□□ -0.22
ACAN-201ENST00000352105 LMOD2Q6P5Q4 547 aa13.65□□□□□ -0.22
ACAN-201ENST00000352105 RWDD1Q9H446 243 aaPredicted RBP13.65□□□□□ -0.22
ACAN-201ENST00000352105 USP35Q9P2H5 1018 aa13.65□□□□□ -0.22
ACAN-201ENST00000352105 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
ACAN-201ENST00000352105 IPO8O15397 1037 aaKnown RBP13.64□□□□□ -0.23
ACAN-201ENST00000352105 PHF14O94880 888 aa13.64□□□□□ -0.23
ACAN-201ENST00000352105 HSP90B1P14625 803 aaKnown RBP13.64□□□□□ -0.23
ACAN-201ENST00000352105 CSPP1Q1MSJ5 1256 aa13.63□□□□□ -0.23
ACAN-201ENST00000352105 ITPRIPQ8IWB1 547 aa13.63□□□□□ -0.23
ACAN-201ENST00000352105 PDE4CQ08493 712 aa13.62□□□□□ -0.23
ACAN-201ENST00000352105 ZNF771Q7L3S4 317 aaPredicted RBP13.62□□□□□ -0.23
ACAN-201ENST00000352105 CHMP7Q8WUX9 453 aaPredicted RBP13.62□□□□□ -0.23
ACAN-201ENST00000352105 PLEKHD1A6NEE1 506 aa13.61□□□□□ -0.23
ACAN-201ENST00000352105 PMFBP1Q8TBY8 1022 aa13.61□□□□□ -0.23
ACAN-201ENST00000352105 CFDP1Q9UEE9 299 aaPredicted RBP13.61□□□□□ -0.23
ACAN-201ENST00000352105 CREBRFQ8IUR6 639 aa13.61□□□□□ -0.23
ACAN-201ENST00000352105 MORC1Q86VD1 984 aa13.6□□□□□ -0.23
ACAN-201ENST00000352105 DCAF11Q8TEB1 546 aa13.6□□□□□ -0.23
ACAN-201ENST00000352105 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
ACAN-201ENST00000352105 GSE1Q14687 1217 aa13.58□□□□□ -0.23
ACAN-201ENST00000352105 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
ACAN-201ENST00000352105 RTF1Q92541 710 aaKnown RBP13.58□□□□□ -0.24
ACAN-201ENST00000352105 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.24
ACAN-201ENST00000352105 TRIM6-TRIM34B2RNG4 842 aa13.58□□□□□ -0.24
ACAN-201ENST00000352105 TPM3P06753 285 aa13.58□□□□□ -0.24
ACAN-201ENST00000352105 CCDC34Q96HJ3 373 aa13.58□□□□□ -0.24
ACAN-201ENST00000352105 PRM3Q9NNZ6 103 aa13.58□□□□□ -0.24
ACAN-201ENST00000352105 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
ACAN-201ENST00000352105 SOX12O15370 315 aa13.57□□□□□ -0.24
ACAN-201ENST00000352105 FOXD4L5Q5VV16 416 aaPredicted RBP13.57□□□□□ -0.24
ACAN-201ENST00000352105 FOXD4L4Q8WXT5 416 aaPredicted RBP13.57□□□□□ -0.24
ACAN-201ENST00000352105 CALRP27797 417 aaKnown RBP13.56□□□□□ -0.24
ACAN-201ENST00000352105 CCAR2Q8N163 923 aaKnown RBP13.55□□□□□ -0.24
ACAN-201ENST00000352105 HSPA5P11021 654 aaKnown RBP13.55□□□□□ -0.24
ACAN-201ENST00000352105 PATL2C9JE40 543 aaKnown RBP13.54□□□□□ -0.24
ACAN-201ENST00000352105 SRPK2P78362 688 aaKnown RBP13.54□□□□□ -0.24
ACAN-201ENST00000352105 EEA1Q15075 1411 aa13.53□□□□□ -0.24
ACAN-201ENST00000352105 ST18O60284 1047 aa13.53□□□□□ -0.24
ACAN-201ENST00000352105 GPS2Q13227 327 aa13.53□□□□□ -0.24
ACAN-201ENST00000352105 GPATCH3Q96I76 525 aa13.52□□□□□ -0.24
ACAN-201ENST00000352105 RASSF8Q8NHQ8 419 aa13.52□□□□□ -0.25
ACAN-201ENST00000352105 FAM13BQ9NYF5 915 aa13.52□□□□□ -0.25
ACAN-201ENST00000352105 DDX49Q9Y6V7 483 aaKnown RBP13.51□□□□□ -0.25
ACAN-201ENST00000352105 ZNF592Q92610 1267 aa13.51□□□□□ -0.25
ACAN-201ENST00000352105 GOLGA6L19H0YKK7 550 aa13.51□□□□□ -0.25
ACAN-201ENST00000352105 CEP89Q96ST8 783 aa13.51□□□□□ -0.25
ACAN-201ENST00000352105 SLC4A3P48751 1232 aa13.5□□□□□ -0.25
ACAN-201ENST00000352105 ANO8Q9HCE9 1232 aaPredicted RBP13.5□□□□□ -0.25
ACAN-201ENST00000352105 KIF16BQ96L93 1317 aa13.5□□□□□ -0.25
ACAN-201ENST00000352105 CCNB3Q8WWL7 1395 aa13.5□□□□□ -0.25
ACAN-201ENST00000352105 PES1O00541 588 aaKnown RBP13.5□□□□□ -0.25
ACAN-201ENST00000352105 SMC4Q9NTJ3 1288 aa13.5□□□□□ -0.25
ACAN-201ENST00000352105 SF3A1Q15459 793 aaKnown RBP13.49□□□□□ -0.25
ACAN-201ENST00000352105 SKOR2Q2VWA4 1001 aaPredicted RBP13.49□□□□□ -0.25
ACAN-201ENST00000352105 TEX35Q5T0J7 233 aa13.49□□□□□ -0.25
ACAN-201ENST00000352105 U2AF1L5P0DN76 240 aaPredicted RBP13.48□□□□□ -0.25
ACAN-201ENST00000352105 U2AF1Q01081 240 aaKnown RBP eCLIP13.48□□□□□ -0.25
ACAN-201ENST00000352105 RALBP1Q15311 655 aa13.48□□□□□ -0.25
ACAN-201ENST00000352105 TSR1Q2NL82 804 aaKnown RBP13.48□□□□□ -0.25
ACAN-201ENST00000352105 TNIKQ9UKE5 1360 aa13.48□□□□□ -0.25
ACAN-201ENST00000352105 SAFB2Q14151 953 aaKnown RBP eCLIP13.48□□□□□ -0.25
ACAN-201ENST00000352105 TPD52L1Q16890 204 aaPredicted RBP13.48□□□□□ -0.25
ACAN-201ENST00000352105 FOXD4L6Q3SYB3 417 aaPredicted RBP13.47□□□□□ -0.25
ACAN-201ENST00000352105 FOXD4L3Q6VB84 417 aaPredicted RBP13.47□□□□□ -0.25
ACAN-201ENST00000352105 GORABQ5T7V8 394 aa13.47□□□□□ -0.25
ACAN-201ENST00000352105 CCDC70Q6NSX1 233 aa13.47□□□□□ -0.25
ACAN-201ENST00000352105 CLUAP1Q96AJ1 413 aa13.46□□□□□ -0.25
ACAN-201ENST00000352105 CEP164Q9UPV0 1460 aa13.46□□□□□ -0.25
ACAN-201ENST00000352105 HMMRO75330 724 aa13.45□□□□□ -0.26
ACAN-201ENST00000352105 BECN2A8MW95 431 aa13.45□□□□□ -0.26
ACAN-201ENST00000352105 H3BQV1 296 aa13.45□□□□□ -0.26
ACAN-201ENST00000352105 IFFO2Q5TF58 517 aa13.45□□□□□ -0.26
ACAN-201ENST00000352105 PDE4AP27815 886 aa13.44□□□□□ -0.26
ACAN-201ENST00000352105 CHMP3Q9Y3E7 222 aa13.44□□□□□ -0.26
ACAN-201ENST00000352105 FAM161AQ3B820 660 aa13.44□□□□□ -0.26
ACAN-201ENST00000352105 KIF3AQ9Y496 699 aa13.43□□□□□ -0.26
ACAN-201ENST00000352105 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
ACAN-201ENST00000352105 SLC4A10Q6U841 1118 aa13.42□□□□□ -0.26
ACAN-201ENST00000352105 CENPJQ9HC77 1338 aaPredicted RBP13.42□□□□□ -0.26
ACAN-201ENST00000352105 TPM1P09493 284 aa13.42□□□□□ -0.26
ACAN-201ENST00000352105 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.42□□□□□ -0.26
ACAN-201ENST00000352105 CCDC146Q8IYE0 955 aa13.42□□□□□ -0.26
ACAN-201ENST00000352105 ROCK2O75116 1388 aaKnown RBP13.42□□□□□ -0.26
ACAN-201ENST00000352105 STK31Q9BXU1 1019 aa13.42□□□□□ -0.26
ACAN-201ENST00000352105 ZNF330Q9Y3S2 320 aaPredicted RBP13.41□□□□□ -0.26
ACAN-201ENST00000352105 HDGFL2Q7Z4V5 671 aaPredicted RBP13.41□□□□□ -0.26
ACAN-201ENST00000352105 CENPQQ7L2Z9 268 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms