RNA–Protein interactions for RNA: ENST00000350033.7

COPS7B-201, Transcript of COP9 signalosome subunit 7B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7B, Length 2,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-201ENST00000350033 DENND4BO75064 1496 aaPredicted RBP19.14■□□□□ 0.65
COPS7B-201ENST00000350033 CARMIL2Q6F5E8 1435 aa19.13■□□□□ 0.65
COPS7B-201ENST00000350033 DDX10Q13206 875 aaKnown RBP19.13■□□□□ 0.65
COPS7B-201ENST00000350033 TIMELESSQ9UNS1 1208 aa19.13■□□□□ 0.65
COPS7B-201ENST00000350033 DAPK1P53355 1430 aa19.12■□□□□ 0.65
COPS7B-201ENST00000350033 KIF14Q15058 1648 aa19.12■□□□□ 0.65
COPS7B-201ENST00000350033 ZNF777Q9ULD5 760 aaPredicted RBP19.12■□□□□ 0.65
COPS7B-201ENST00000350033 ABCC5O15440 1437 aa19.11■□□□□ 0.65
COPS7B-201ENST00000350033 TROQ12816 1431 aaPredicted RBP19.1■□□□□ 0.65
COPS7B-201ENST00000350033 KCNH8Q96L42 1107 aa19.1■□□□□ 0.65
COPS7B-201ENST00000350033 CFDP1Q9UEE9 299 aaPredicted RBP19.08■□□□□ 0.64
COPS7B-201ENST00000350033 DNMT1P26358 1616 aaKnown RBP19.07■□□□□ 0.64
COPS7B-201ENST00000350033 MPHOSPH9Q99550 1183 aa19.07■□□□□ 0.64
COPS7B-201ENST00000350033 AKNAQ7Z591 1439 aa19.06■□□□□ 0.64
COPS7B-201ENST00000350033 GPATCH8Q9UKJ3 1502 aaKnown RBP19.05■□□□□ 0.64
COPS7B-201ENST00000350033 KDM5BQ9UGL1 1544 aa19.04■□□□□ 0.64
COPS7B-201ENST00000350033 CAMSAP2Q08AD1 1489 aa19.04■□□□□ 0.64
COPS7B-201ENST00000350033 ABCA8O94911 1581 aa19.02■□□□□ 0.64
COPS7B-201ENST00000350033 ATP10BO94823 1461 aa19.02■□□□□ 0.63
COPS7B-201ENST00000350033 CHD1O14646 1710 aa19.02■□□□□ 0.63
COPS7B-201ENST00000350033 PLEKHD1A6NEE1 506 aa19■□□□□ 0.63
COPS7B-201ENST00000350033 ROCK1Q13464 1354 aa19■□□□□ 0.63
COPS7B-201ENST00000350033 ADCY10Q96PN6 1610 aa18.99■□□□□ 0.63
COPS7B-201ENST00000350033 TSHZ2Q9NRE2 1034 aa18.98■□□□□ 0.63
COPS7B-201ENST00000350033 ITSN2Q9NZM3 1697 aa18.98■□□□□ 0.63
COPS7B-201ENST00000350033 PTPRGP23470 1445 aa18.96■□□□□ 0.63
COPS7B-201ENST00000350033 SLC4A1APQ9BWU0 796 aaKnown RBP18.95■□□□□ 0.62
COPS7B-201ENST00000350033 CDC42BPAQ5VT25 1732 aa18.95■□□□□ 0.62
COPS7B-201ENST00000350033 L3MBTL2Q969R5 705 aa18.95■□□□□ 0.62
COPS7B-201ENST00000350033 NCOA1Q15788 1441 aa18.93■□□□□ 0.62
COPS7B-201ENST00000350033 ABCC10Q5T3U5 1492 aa18.92■□□□□ 0.62
COPS7B-201ENST00000350033 ANKRD30BQ9BXX2 1392 aa18.91■□□□□ 0.62
COPS7B-201ENST00000350033 ERCC6L2Q5T890 1561 aa18.91■□□□□ 0.62
COPS7B-201ENST00000350033 CROCC2H7BZ55 1655 aa18.9■□□□□ 0.62
COPS7B-201ENST00000350033 ADGBQ8N7X0 1667 aa18.9■□□□□ 0.62
COPS7B-201ENST00000350033 HNRNPMP52272 730 aaKnown RBP eCLIP18.89■□□□□ 0.614e-7■■■■□ 19.8
COPS7B-201ENST00000350033 SUPT16HQ9Y5B9 1047 aaKnown RBP18.89■□□□□ 0.61
COPS7B-201ENST00000350033 HSPA5P11021 654 aaKnown RBP18.88■□□□□ 0.61
COPS7B-201ENST00000350033 PZPP20742 1482 aa18.88■□□□□ 0.61
COPS7B-201ENST00000350033 NBPF8Q3BBV2 869 aa18.85■□□□□ 0.61
COPS7B-201ENST00000350033 ANKRD30AQ9BXX3 1397 aa18.84■□□□□ 0.61
COPS7B-201ENST00000350033 ADGRL2O95490 1459 aa18.83■□□□□ 0.61
COPS7B-201ENST00000350033 RPRD2Q5VT52 1461 aaKnown RBP18.83■□□□□ 0.61
COPS7B-201ENST00000350033 C9orf84Q5VXU9 1444 aa18.82■□□□□ 0.6
COPS7B-201ENST00000350033 SHROOM2Q13796 1616 aa18.81■□□□□ 0.6
COPS7B-201ENST00000350033 ANP32CO43423 234 aa18.81■□□□□ 0.6
COPS7B-201ENST00000350033 PKD2Q13563 968 aa18.81■□□□□ 0.6
COPS7B-201ENST00000350033 ANKRD50Q9ULJ7 1429 aa18.81■□□□□ 0.6
COPS7B-201ENST00000350033 WASHC2AQ641Q2 1341 aa18.8■□□□□ 0.6
COPS7B-201ENST00000350033 TEX14Q8IWB6 1497 aa18.8■□□□□ 0.6
COPS7B-201ENST00000350033 CDC42BPBQ9Y5S2 1711 aa18.8■□□□□ 0.6
COPS7B-201ENST00000350033 C11orf95C9JLR9 678 aaPredicted RBP18.78■□□□□ 0.6
COPS7B-201ENST00000350033 TSPY4P0CV99 314 aa18.78■□□□□ 0.6
COPS7B-201ENST00000350033 TSPY10P0CW01 314 aa18.78■□□□□ 0.6
COPS7B-201ENST00000350033 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.63e-10■■■■■ 43
COPS7B-201ENST00000350033 SAMD9LQ8IVG5 1584 aa18.77■□□□□ 0.59
COPS7B-201ENST00000350033 TTC37Q6PGP7 1564 aa18.76■□□□□ 0.59
COPS7B-201ENST00000350033 NUP155O75694 1391 aa18.76■□□□□ 0.59
COPS7B-201ENST00000350033 MBD5Q9P267 1494 aa18.75■□□□□ 0.59
COPS7B-201ENST00000350033 KIAA1107Q9UPP5 1409 aa18.75■□□□□ 0.59
COPS7B-201ENST00000350033 ZNF326Q5BKZ1 582 aaKnown RBP18.75■□□□□ 0.59
COPS7B-201ENST00000350033 KIF15Q9NS87 1388 aa18.74■□□□□ 0.59
COPS7B-201ENST00000350033 PREX2Q70Z35 1606 aa18.74■□□□□ 0.59
COPS7B-201ENST00000350033 SHANK2Q9UPX8 1470 aa18.73■□□□□ 0.59
COPS7B-201ENST00000350033 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.71■□□□□ 0.59
COPS7B-201ENST00000350033 ABCC2Q92887 1545 aa18.71■□□□□ 0.59
COPS7B-201ENST00000350033 SYCP2Q9BX26 1530 aa18.7■□□□□ 0.58
COPS7B-201ENST00000350033 CCER2I3L3R5 266 aa18.7■□□□□ 0.58
COPS7B-201ENST00000350033 ARHGAP5Q13017 1502 aa18.7■□□□□ 0.58
COPS7B-201ENST00000350033 ARHGEF5Q12774 1597 aa18.69■□□□□ 0.58
COPS7B-201ENST00000350033 CCDC141Q6ZP82 1450 aa18.68■□□□□ 0.58
COPS7B-201ENST00000350033 CLASP1Q7Z460 1538 aa18.67■□□□□ 0.58
COPS7B-201ENST00000350033 CCDC7Q96M83 1385 aa18.64■□□□□ 0.57
COPS7B-201ENST00000350033 ZCCHC11Q5TAX3 1644 aaKnown RBP18.64■□□□□ 0.57
COPS7B-201ENST00000350033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.63■□□□□ 0.576e-8■■□□□ 11.8
COPS7B-201ENST00000350033 SPATA31E1Q6ZUB1 1445 aa18.63■□□□□ 0.57
COPS7B-201ENST00000350033 KDM2AQ9Y2K7 1162 aa18.62■□□□□ 0.57
COPS7B-201ENST00000350033 MYO5CQ9NQX4 1742 aa18.62■□□□□ 0.57
COPS7B-201ENST00000350033 ARHGEF12Q9NZN5 1544 aa18.61■□□□□ 0.57
COPS7B-201ENST00000350033 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
COPS7B-201ENST00000350033 CCDC184Q52MB2 194 aa18.6■□□□□ 0.57
COPS7B-201ENST00000350033 CNTLNQ9NXG0 1405 aa18.6■□□□□ 0.57
COPS7B-201ENST00000350033 KDM5DQ9BY66 1539 aa18.59■□□□□ 0.57
COPS7B-201ENST00000350033 POLR3GLQ9BT43 218 aa18.59■□□□□ 0.57
COPS7B-201ENST00000350033 SLC24A1O60721 1099 aa18.58■□□□□ 0.57
COPS7B-201ENST00000350033 FAM135AQ9P2D6 1515 aa18.58■□□□□ 0.56
COPS7B-201ENST00000350033 CNGB1Q14028 1251 aaPredicted RBP18.58■□□□□ 0.56
COPS7B-201ENST00000350033 RSPH4AQ5TD94 716 aa18.57■□□□□ 0.56
COPS7B-201ENST00000350033 DCAF11Q8TEB1 546 aa18.56■□□□□ 0.56
COPS7B-201ENST00000350033 USP47Q96K76 1375 aa18.56■□□□□ 0.56
COPS7B-201ENST00000350033 PLEKHH2Q8IVE3 1493 aa18.55■□□□□ 0.56
COPS7B-201ENST00000350033 BCORL1Q5H9F3 1711 aa18.55■□□□□ 0.56
COPS7B-201ENST00000350033 PLCH2O75038 1416 aa18.53■□□□□ 0.56
COPS7B-201ENST00000350033 RGL3Q3MIN7 710 aa18.52■□□□□ 0.56
COPS7B-201ENST00000350033 BCANQ96GW7 911 aa18.52■□□□□ 0.56
COPS7B-201ENST00000350033 MAST1Q9Y2H9 1570 aa18.52■□□□□ 0.55
COPS7B-201ENST00000350033 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.55
COPS7B-201ENST00000350033 TRAPPC8Q9Y2L5 1435 aa18.51■□□□□ 0.55
COPS7B-201ENST00000350033 PRKRIP1Q9H875 184 aaPredicted RBP18.51■□□□□ 0.55
COPS7B-201ENST00000350033 HNRNPUQ00839 825 aaKnown RBP eCLIP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms