RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 TULP1O00294 542 aaPredicted RBP16.15■□□□□ 0.18
CTNNB1-201ENST00000349496 CHIC2Q9UKJ5 165 aa16.15■□□□□ 0.18
CTNNB1-201ENST00000349496 BIVM-ERCC5R4GMW8 1640 aa16.14■□□□□ 0.17
CTNNB1-201ENST00000349496 ANP32BQ92688 251 aaKnown RBP16.1■□□□□ 0.17
CTNNB1-201ENST00000349496 CALD1Q05682 793 aaKnown RBP16.1■□□□□ 0.17
CTNNB1-201ENST00000349496 VGLL3A8MV65 326 aa16.1■□□□□ 0.17
CTNNB1-201ENST00000349496 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
CTNNB1-201ENST00000349496 IPO4Q8TEX9 1081 aaKnown RBP16.09■□□□□ 0.17
CTNNB1-201ENST00000349496 NFKBIBQ15653 356 aa16.09■□□□□ 0.17
CTNNB1-201ENST00000349496 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
CTNNB1-201ENST00000349496 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
CTNNB1-201ENST00000349496 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
CTNNB1-201ENST00000349496 RRAGDQ9NQL2 400 aaPredicted RBP16.07■□□□□ 0.16
CTNNB1-201ENST00000349496 PLPPR3Q6T4P5 718 aa16.07■□□□□ 0.16
CTNNB1-201ENST00000349496 PDCL3Q9H2J4 239 aa16.07■□□□□ 0.16
CTNNB1-201ENST00000349496 ERICH3Q5RHP9 1530 aa16.07■□□□□ 0.16
CTNNB1-201ENST00000349496 ZFP91Q96JP5 570 aaPredicted RBP16.06■□□□□ 0.16
CTNNB1-201ENST00000349496 RRP7BPQ9NSQ0 103 aa16.05■□□□□ 0.16
CTNNB1-201ENST00000349496 GTF2E1P29083 439 aaPredicted RBP16.05■□□□□ 0.16
CTNNB1-201ENST00000349496 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
CTNNB1-201ENST00000349496 FOXD1Q16676 465 aa16.03■□□□□ 0.16
CTNNB1-201ENST00000349496 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
CTNNB1-201ENST00000349496 RSPH4AQ5TD94 716 aa16.01■□□□□ 0.15
CTNNB1-201ENST00000349496 DNTTIP2Q5QJE6 756 aaKnown RBP16.01■□□□□ 0.15
CTNNB1-201ENST00000349496 SENP3-EIF4A1A0A087X0R7 540 aa16.01■□□□□ 0.15
CTNNB1-201ENST00000349496 C14orf37Q86TY3 774 aa16.01■□□□□ 0.15
CTNNB1-201ENST00000349496 DCAF11Q8TEB1 546 aa16.01■□□□□ 0.15
CTNNB1-201ENST00000349496 PRDM10Q9NQV6 1147 aa16.01■□□□□ 0.15
CTNNB1-201ENST00000349496 L1TD1Q5T7N2 865 aaKnown RBP16■□□□□ 0.15
CTNNB1-201ENST00000349496 DDRGK1Q96HY6 314 aa16■□□□□ 0.15
CTNNB1-201ENST00000349496 STAC3Q96MF2 364 aa16■□□□□ 0.15
CTNNB1-201ENST00000349496 SLC4A3P48751 1232 aa15.99■□□□□ 0.15
CTNNB1-201ENST00000349496 FAM13BQ9NYF5 915 aa15.99■□□□□ 0.15
CTNNB1-201ENST00000349496 TRIM44Q96DX7 344 aaPredicted RBP15.98■□□□□ 0.15
CTNNB1-201ENST00000349496 HOMEZQ8IX15 550 aa15.98■□□□□ 0.15
CTNNB1-201ENST00000349496 FTSJ3Q8IY81 847 aaKnown RBP15.98■□□□□ 0.15
CTNNB1-201ENST00000349496 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
CTNNB1-201ENST00000349496 LRRC9Q6ZRR7 1453 aa15.96■□□□□ 0.15
CTNNB1-201ENST00000349496 SETD5Q9C0A6 1442 aa15.95■□□□□ 0.14
CTNNB1-201ENST00000349496 E9PSI1 815 aa15.94■□□□□ 0.14
CTNNB1-201ENST00000349496 PRDM4Q9UKN5 801 aa15.94■□□□□ 0.14
CTNNB1-201ENST00000349496 MTUS2Q5JR59 1369 aa15.93■□□□□ 0.14
CTNNB1-201ENST00000349496 FBLN2P98095 1184 aa15.93■□□□□ 0.14
CTNNB1-201ENST00000349496 APPP05067 770 aa15.91■□□□□ 0.14
CTNNB1-201ENST00000349496 TOPBP1Q92547 1522 aa15.91■□□□□ 0.14
CTNNB1-201ENST00000349496 MAPKBP1O60336 1514 aa15.91■□□□□ 0.14
CTNNB1-201ENST00000349496 PCF11O94913 1555 aaKnown RBP15.91■□□□□ 0.14
CTNNB1-201ENST00000349496 TIAM1Q13009 1591 aa15.9■□□□□ 0.14
CTNNB1-201ENST00000349496 FRAT2O75474 233 aaPredicted RBP15.9■□□□□ 0.14
CTNNB1-201ENST00000349496 SECISBP2LQ93073 1101 aaKnown RBP15.9■□□□□ 0.14
CTNNB1-201ENST00000349496 TPM2P07951 284 aa15.9■□□□□ 0.14
CTNNB1-201ENST00000349496 WDR97A6NE52 1622 aa15.89■□□□□ 0.13
CTNNB1-201ENST00000349496 PTPRKQ15262 1439 aa15.88■□□□□ 0.13
CTNNB1-201ENST00000349496 AQRO60306 1485 aaKnown RBP eCLIP15.86■□□□□ 0.135e-8■■■■■ 34.8
CTNNB1-201ENST00000349496 AEBP1Q8IUX7 1158 aa15.86■□□□□ 0.13
CTNNB1-201ENST00000349496 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
CTNNB1-201ENST00000349496 CLCN1P35523 988 aa15.85■□□□□ 0.13
CTNNB1-201ENST00000349496 PATL2C9JE40 543 aaKnown RBP15.85■□□□□ 0.13
CTNNB1-201ENST00000349496 CCER2I3L3R5 266 aa15.84■□□□□ 0.13
CTNNB1-201ENST00000349496 FAM9BQ8IZU0 186 aa15.84■□□□□ 0.13
CTNNB1-201ENST00000349496 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
CTNNB1-201ENST00000349496 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
CTNNB1-201ENST00000349496 GZF1Q9H116 711 aaPredicted RBP15.83■□□□□ 0.12
CTNNB1-201ENST00000349496 PPP1R15AO75807 674 aaPredicted RBP15.82■□□□□ 0.12
CTNNB1-201ENST00000349496 WWC1Q8IX03 1113 aa15.82■□□□□ 0.12
CTNNB1-201ENST00000349496 ZNF777Q9ULD5 760 aaPredicted RBP15.82■□□□□ 0.12
CTNNB1-201ENST00000349496 FHAD1B1AJZ9 1412 aa15.81■□□□□ 0.12
CTNNB1-201ENST00000349496 PDE4AP27815 886 aa15.81■□□□□ 0.12
CTNNB1-201ENST00000349496 GOLGA6L3A6NEY3 463 aa15.81■□□□□ 0.12
CTNNB1-201ENST00000349496 IRX3P78415 501 aaPredicted RBP15.81■□□□□ 0.12
CTNNB1-201ENST00000349496 ZNF830Q96NB3 372 aaPredicted RBP15.81■□□□□ 0.12
CTNNB1-201ENST00000349496 CNPY4Q8N129 248 aa15.8■□□□□ 0.12
CTNNB1-201ENST00000349496 KIAA1211Q6ZU35 1233 aa15.8■□□□□ 0.12
CTNNB1-201ENST00000349496 TONSLQ96HA7 1378 aa15.79■□□□□ 0.12
CTNNB1-201ENST00000349496 MAP7D2Q96T17 732 aa15.79■□□□□ 0.12
CTNNB1-201ENST00000349496 PPP4R3BQ5MIZ7 849 aa15.78■□□□□ 0.12
CTNNB1-201ENST00000349496 PDS5BQ9NTI5 1447 aa15.78■□□□□ 0.12
CTNNB1-201ENST00000349496 MYH16Q9H6N6 1097 aa15.77■□□□□ 0.11
CTNNB1-201ENST00000349496 TEX2Q8IWB9 1127 aa15.76■□□□□ 0.11
CTNNB1-201ENST00000349496 GAPVD1Q14C86 1478 aa15.76■□□□□ 0.11
CTNNB1-201ENST00000349496 SMAP1Q8IYB5 467 aaPredicted RBP15.76■□□□□ 0.11
CTNNB1-201ENST00000349496 POGKQ9P215 609 aa15.76■□□□□ 0.11
CTNNB1-201ENST00000349496 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
CTNNB1-201ENST00000349496 FGD6Q6ZV73 1430 aa15.75■□□□□ 0.11
CTNNB1-201ENST00000349496 DNMBPQ6XZF7 1577 aa15.74■□□□□ 0.11
CTNNB1-201ENST00000349496 ESPNB1AK53 854 aa15.73■□□□□ 0.11
CTNNB1-201ENST00000349496 CENPJQ9HC77 1338 aaPredicted RBP15.72■□□□□ 0.11
CTNNB1-201ENST00000349496 CCDC184Q52MB2 194 aa15.72■□□□□ 0.11
CTNNB1-201ENST00000349496 CERS3Q8IU89 383 aa15.72■□□□□ 0.11
CTNNB1-201ENST00000349496 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
CTNNB1-201ENST00000349496 TCERG1O14776 1098 aaKnown RBP15.72■□□□□ 0.11
CTNNB1-201ENST00000349496 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
CTNNB1-201ENST00000349496 CGNQ9P2M7 1197 aaKnown RBP15.7■□□□□ 0.1
CTNNB1-201ENST00000349496 NCOA2Q15596 1464 aa15.7■□□□□ 0.1
CTNNB1-201ENST00000349496 CCDC18Q5T9S5 1454 aa15.7■□□□□ 0.1
CTNNB1-201ENST00000349496 CDK13Q14004 1512 aaKnown RBP15.69■□□□□ 0.1
CTNNB1-201ENST00000349496 MSNP26038 577 aaKnown RBP15.68■□□□□ 0.1
CTNNB1-201ENST00000349496 BCCIPQ9P287 314 aaKnown RBP eCLIP15.68■□□□□ 0.19e-7■■■■□ 21.8
CTNNB1-201ENST00000349496 HSPA5P11021 654 aaKnown RBP15.68■□□□□ 0.1
CTNNB1-201ENST00000349496 R3HCC1Q9Y3T6 440 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms