RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 WASHC2AQ641Q2 1341 aa20.46■□□□□ 0.87
ARHGEF1-202ENST00000347545 HSPA5P11021 654 aaKnown RBP20.46■□□□□ 0.87
ARHGEF1-202ENST00000347545 TSHZ2Q9NRE2 1034 aa20.44■□□□□ 0.86
ARHGEF1-202ENST00000347545 TEX14Q8IWB6 1497 aa20.43■□□□□ 0.86
ARHGEF1-202ENST00000347545 ANKRD30BQ9BXX2 1392 aa20.43■□□□□ 0.86
ARHGEF1-202ENST00000347545 KIF14Q15058 1648 aa20.43■□□□□ 0.86
ARHGEF1-202ENST00000347545 RPRD2Q5VT52 1461 aaKnown RBP20.42■□□□□ 0.86
ARHGEF1-202ENST00000347545 ADCY10Q96PN6 1610 aa20.42■□□□□ 0.86
ARHGEF1-202ENST00000347545 L3MBTL2Q969R5 705 aa20.42■□□□□ 0.86
ARHGEF1-202ENST00000347545 ADGBQ8N7X0 1667 aa20.42■□□□□ 0.86
ARHGEF1-202ENST00000347545 CROCC2H7BZ55 1655 aa20.41■□□□□ 0.86
ARHGEF1-202ENST00000347545 FKBP8Q14318 412 aa20.41■□□□□ 0.86
ARHGEF1-202ENST00000347545 PRG4Q92954 1404 aaPredicted RBP20.41■□□□□ 0.86
ARHGEF1-202ENST00000347545 ITSN2Q9NZM3 1697 aa20.41■□□□□ 0.86
ARHGEF1-202ENST00000347545 BCANQ96GW7 911 aa20.4■□□□□ 0.86
ARHGEF1-202ENST00000347545 CAMSAP2Q08AD1 1489 aa20.39■□□□□ 0.86
ARHGEF1-202ENST00000347545 PLB1Q6P1J6 1458 aa20.39■□□□□ 0.86
ARHGEF1-202ENST00000347545 MAGI1Q96QZ7 1491 aaPredicted RBP20.39■□□□□ 0.85
ARHGEF1-202ENST00000347545 POLR1AO95602 1720 aaPredicted RBP20.38■□□□□ 0.85
ARHGEF1-202ENST00000347545 TROQ12816 1431 aaPredicted RBP20.38■□□□□ 0.85
ARHGEF1-202ENST00000347545 PZPP20742 1482 aa20.37■□□□□ 0.85
ARHGEF1-202ENST00000347545 C11orf95C9JLR9 678 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF1-202ENST00000347545 NBPF8Q3BBV2 869 aa20.35■□□□□ 0.85
ARHGEF1-202ENST00000347545 NCOA1Q15788 1441 aa20.35■□□□□ 0.85
ARHGEF1-202ENST00000347545 SYNJ2O15056 1496 aa20.35■□□□□ 0.85
ARHGEF1-202ENST00000347545 GPATCH8Q9UKJ3 1502 aaKnown RBP20.35■□□□□ 0.85
ARHGEF1-202ENST00000347545 EIF4G2P78344 907 aaKnown RBP eCLIP20.35■□□□□ 0.854e-7■■■■□ 20.1
ARHGEF1-202ENST00000347545 CNTLNQ9NXG0 1405 aa20.35■□□□□ 0.85
ARHGEF1-202ENST00000347545 CDC42BPAQ5VT25 1732 aa20.31■□□□□ 0.84
ARHGEF1-202ENST00000347545 ADGRL2O95490 1459 aa20.3■□□□□ 0.84
ARHGEF1-202ENST00000347545 SPATA31E1Q6ZUB1 1445 aa20.3■□□□□ 0.84
ARHGEF1-202ENST00000347545 CCDC7Q96M83 1385 aa20.3■□□□□ 0.84
ARHGEF1-202ENST00000347545 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
ARHGEF1-202ENST00000347545 NUP160Q12769 1436 aa20.29■□□□□ 0.84
ARHGEF1-202ENST00000347545 CDK11AQ9UQ88 783 aaPredicted RBP20.29■□□□□ 0.84
ARHGEF1-202ENST00000347545 MBD5Q9P267 1494 aa20.28■□□□□ 0.84
ARHGEF1-202ENST00000347545 SLC4A1APQ9BWU0 796 aaKnown RBP20.28■□□□□ 0.84
ARHGEF1-202ENST00000347545 CCDC184Q52MB2 194 aa20.27■□□□□ 0.84
ARHGEF1-202ENST00000347545 ABCA8O94911 1581 aa20.26■□□□□ 0.83
ARHGEF1-202ENST00000347545 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF1-202ENST00000347545 CFDP1Q9UEE9 299 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF1-202ENST00000347545 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
ARHGEF1-202ENST00000347545 ABCC10Q5T3U5 1492 aa20.22■□□□□ 0.83
ARHGEF1-202ENST00000347545 BCORL1Q5H9F3 1711 aa20.22■□□□□ 0.83
ARHGEF1-202ENST00000347545 NEFLP07196 543 aa20.22■□□□□ 0.83
ARHGEF1-202ENST00000347545 CARMIL2Q6F5E8 1435 aa20.2■□□□□ 0.82
ARHGEF1-202ENST00000347545 KIAA1107Q9UPP5 1409 aa20.2■□□□□ 0.82
ARHGEF1-202ENST00000347545 JPH4Q96JJ6 628 aa20.2■□□□□ 0.82
ARHGEF1-202ENST00000347545 KIF7Q2M1P5 1343 aa20.2■□□□□ 0.82
ARHGEF1-202ENST00000347545 PRKRIP1Q9H875 184 aaPredicted RBP20.19■□□□□ 0.82
ARHGEF1-202ENST00000347545 ZNF777Q9ULD5 760 aaPredicted RBP20.18■□□□□ 0.82
ARHGEF1-202ENST00000347545 FBLN2P98095 1184 aa20.18■□□□□ 0.82
ARHGEF1-202ENST00000347545 ATP10BO94823 1461 aa20.18■□□□□ 0.82
ARHGEF1-202ENST00000347545 KDM5CP41229 1560 aa20.15■□□□□ 0.82
ARHGEF1-202ENST00000347545 SHANK2Q9UPX8 1470 aa20.15■□□□□ 0.82
ARHGEF1-202ENST00000347545 ANKRD30AQ9BXX3 1397 aa20.15■□□□□ 0.82
ARHGEF1-202ENST00000347545 ANKRD50Q9ULJ7 1429 aa20.14■□□□□ 0.81
ARHGEF1-202ENST00000347545 PKD2Q13563 968 aa20.12■□□□□ 0.81
ARHGEF1-202ENST00000347545 KDM5DQ9BY66 1539 aa20.12■□□□□ 0.81
ARHGEF1-202ENST00000347545 C9orf84Q5VXU9 1444 aa20.12■□□□□ 0.81
ARHGEF1-202ENST00000347545 ANP32EQ9BTT0 268 aa20.09■□□□□ 0.81
ARHGEF1-202ENST00000347545 CDC42BPBQ9Y5S2 1711 aa20.09■□□□□ 0.81
ARHGEF1-202ENST00000347545 DHX29Q7Z478 1369 aaKnown RBP20.09■□□□□ 0.81
ARHGEF1-202ENST00000347545 ARHGEF5Q12774 1597 aa20.08■□□□□ 0.8
ARHGEF1-202ENST00000347545 USP47Q96K76 1375 aa20.07■□□□□ 0.8
ARHGEF1-202ENST00000347545 IRX6P78412 446 aaPredicted RBP20.07■□□□□ 0.8
ARHGEF1-202ENST00000347545 BCL11AQ9H165 835 aa20.07■□□□□ 0.8
ARHGEF1-202ENST00000347545 UHRF1BP1Q6BDS2 1440 aa20.06■□□□□ 0.8
ARHGEF1-202ENST00000347545 PLEKHD1A6NEE1 506 aa20.06■□□□□ 0.8
ARHGEF1-202ENST00000347545 SAMD9LQ8IVG5 1584 aa20.06■□□□□ 0.8
ARHGEF1-202ENST00000347545 MRS2Q9HD23 443 aa20.06■□□□□ 0.8
ARHGEF1-202ENST00000347545 PREX2Q70Z35 1606 aa20.05■□□□□ 0.8
ARHGEF1-202ENST00000347545 FAM9BQ8IZU0 186 aa20.05■□□□□ 0.8
ARHGEF1-202ENST00000347545 RALGAPBQ86X10 1494 aa20.05■□□□□ 0.8
ARHGEF1-202ENST00000347545 PTPRGP23470 1445 aa20.04■□□□□ 0.8
ARHGEF1-202ENST00000347545 ARHGEF12Q9NZN5 1544 aa20.03■□□□□ 0.8
ARHGEF1-202ENST00000347545 NUP155O75694 1391 aa20.03■□□□□ 0.8
ARHGEF1-202ENST00000347545 RBM19Q9Y4C8 960 aaKnown RBP20.02■□□□□ 0.8
ARHGEF1-202ENST00000347545 ZNF326Q5BKZ1 582 aaKnown RBP20.01■□□□□ 0.79
ARHGEF1-202ENST00000347545 ZBED9Q6R2W3 1325 aa20.01■□□□□ 0.79
ARHGEF1-202ENST00000347545 CHD1O14646 1710 aa20.01■□□□□ 0.79
ARHGEF1-202ENST00000347545 KIF15Q9NS87 1388 aa20■□□□□ 0.79
ARHGEF1-202ENST00000347545 HNRNPMP52272 730 aaKnown RBP eCLIP19.99■□□□□ 0.79
ARHGEF1-202ENST00000347545 E9PCH4 1651 aa19.97■□□□□ 0.79
ARHGEF1-202ENST00000347545 TTC37Q6PGP7 1564 aa19.96■□□□□ 0.79
ARHGEF1-202ENST00000347545 CCDC141Q6ZP82 1450 aa19.95■□□□□ 0.78
ARHGEF1-202ENST00000347545 FAM135AQ9P2D6 1515 aa19.95■□□□□ 0.78
ARHGEF1-202ENST00000347545 SHROOM2Q13796 1616 aa19.94■□□□□ 0.78
ARHGEF1-202ENST00000347545 TSPY4P0CV99 314 aa19.92■□□□□ 0.78
ARHGEF1-202ENST00000347545 TSPY10P0CW01 314 aa19.92■□□□□ 0.78
ARHGEF1-202ENST00000347545 ARID4BQ4LE39 1312 aaPredicted RBP19.92■□□□□ 0.78
ARHGEF1-202ENST00000347545 UNC13BO14795 1591 aa19.92■□□□□ 0.78
ARHGEF1-202ENST00000347545 SYCP2Q9BX26 1530 aa19.92■□□□□ 0.78
ARHGEF1-202ENST00000347545 TRPM1Q7Z4N2 1603 aa19.92■□□□□ 0.78
ARHGEF1-202ENST00000347545 MAST1Q9Y2H9 1570 aa19.91■□□□□ 0.78
ARHGEF1-202ENST00000347545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.9■□□□□ 0.78
ARHGEF1-202ENST00000347545 POLR3GLQ9BT43 218 aa19.9■□□□□ 0.78
ARHGEF1-202ENST00000347545 ERICH6BQ5W0A0 696 aa19.89■□□□□ 0.77
ARHGEF1-202ENST00000347545 ERCC6L2Q5T890 1561 aa19.88■□□□□ 0.77
ARHGEF1-202ENST00000347545 CNGB1Q14028 1251 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms