RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 PLCH2O75038 1416 aa18.12■□□□□ 0.49
UBE2A-201ENST00000346330 KIF14Q15058 1648 aa18.12■□□□□ 0.49
UBE2A-201ENST00000346330 HECW1Q76N89 1606 aa18.12■□□□□ 0.49
UBE2A-201ENST00000346330 ZFYVE16Q7Z3T8 1539 aa18.1■□□□□ 0.49
UBE2A-201ENST00000346330 SCAPERQ9BY12 1400 aa18.09■□□□□ 0.49
UBE2A-201ENST00000346330 POGZQ7Z3K3 1410 aa18.07■□□□□ 0.48
UBE2A-201ENST00000346330 TROQ12816 1431 aaPredicted RBP18.05■□□□□ 0.48
UBE2A-201ENST00000346330 MYO5CQ9NQX4 1742 aa18.03■□□□□ 0.48
UBE2A-201ENST00000346330 FER1L4A9Z1Z3 1794 aa18.02■□□□□ 0.48
UBE2A-201ENST00000346330 MLECQ14165 292 aa18.02■□□□□ 0.48
UBE2A-201ENST00000346330 EFCAB2Q5VUJ9 269 aa18.02■□□□□ 0.48
UBE2A-201ENST00000346330 PLPPR3Q6T4P5 718 aa18.02■□□□□ 0.48
UBE2A-201ENST00000346330 CDK11AQ9UQ88 783 aaPredicted RBP18.01■□□□□ 0.47
UBE2A-201ENST00000346330 MAGI2Q86UL8 1455 aa18.01■□□□□ 0.47
UBE2A-201ENST00000346330 AFAP1Q8N556 730 aa18■□□□□ 0.47
UBE2A-201ENST00000346330 ARHGEF12Q9NZN5 1544 aa17.98■□□□□ 0.47
UBE2A-201ENST00000346330 HSPA2P54652 639 aa17.98■□□□□ 0.47
UBE2A-201ENST00000346330 CASKIN1Q8WXD9 1431 aa17.98■□□□□ 0.47
UBE2A-201ENST00000346330 KDM5CP41229 1560 aa17.97■□□□□ 0.47
UBE2A-201ENST00000346330 ARHGAP5Q13017 1502 aa17.97■□□□□ 0.47
UBE2A-201ENST00000346330 CLIP1P30622 1438 aa17.96■□□□□ 0.47
UBE2A-201ENST00000346330 ATP10AO60312 1499 aa17.95■□□□□ 0.46
UBE2A-201ENST00000346330 DIP2CQ9Y2E4 1556 aa17.95■□□□□ 0.46
UBE2A-201ENST00000346330 ABCA6Q8N139 1617 aa17.94■□□□□ 0.46
UBE2A-201ENST00000346330 CDC42BPBQ9Y5S2 1711 aa17.94■□□□□ 0.46
UBE2A-201ENST00000346330 C9orf84Q5VXU9 1444 aa17.93■□□□□ 0.46
UBE2A-201ENST00000346330 ZNF518AQ6AHZ1 1483 aa17.93■□□□□ 0.46
UBE2A-201ENST00000346330 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
UBE2A-201ENST00000346330 PREX2Q70Z35 1606 aa17.91■□□□□ 0.46
UBE2A-201ENST00000346330 CEBPAP49715 358 aaPredicted RBP17.91■□□□□ 0.46
UBE2A-201ENST00000346330 FBXO41Q8TF61 875 aa17.91■□□□□ 0.46
UBE2A-201ENST00000346330 CCDC18Q5T9S5 1454 aa17.89■□□□□ 0.45
UBE2A-201ENST00000346330 ABCC1P33527 1531 aa17.89■□□□□ 0.45
UBE2A-201ENST00000346330 ITSN2Q9NZM3 1697 aa17.88■□□□□ 0.45
UBE2A-201ENST00000346330 FYCO1Q9BQS8 1478 aa17.88■□□□□ 0.45
UBE2A-201ENST00000346330 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
UBE2A-201ENST00000346330 CDC42BPAQ5VT25 1732 aa17.85■□□□□ 0.45
UBE2A-201ENST00000346330 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
UBE2A-201ENST00000346330 STRCQ7RTU9 1775 aa17.84■□□□□ 0.45
UBE2A-201ENST00000346330 REREQ9P2R6 1566 aa17.84■□□□□ 0.45
UBE2A-201ENST00000346330 MLH3Q9UHC1 1453 aa17.84■□□□□ 0.45
UBE2A-201ENST00000346330 KIDINS220Q9ULH0 1771 aa17.82■□□□□ 0.44
UBE2A-201ENST00000346330 ZNF777Q9ULD5 760 aaPredicted RBP17.82■□□□□ 0.44
UBE2A-201ENST00000346330 GPATCH8Q9UKJ3 1502 aaKnown RBP17.82■□□□□ 0.44
UBE2A-201ENST00000346330 C3P01024 1663 aa17.81■□□□□ 0.44
UBE2A-201ENST00000346330 SAMD9LQ8IVG5 1584 aa17.8■□□□□ 0.44
UBE2A-201ENST00000346330 HNRNPMP52272 730 aaKnown RBP eCLIP17.79■□□□□ 0.44
UBE2A-201ENST00000346330 SYCP2Q9BX26 1530 aa17.77■□□□□ 0.44
UBE2A-201ENST00000346330 AGLP35573 1532 aa17.76■□□□□ 0.43
UBE2A-201ENST00000346330 ZNF644Q9H582 1327 aaPredicted RBP17.74■□□□□ 0.43
UBE2A-201ENST00000346330 CFDP1Q9UEE9 299 aaPredicted RBP17.73■□□□□ 0.43
UBE2A-201ENST00000346330 MTUS2Q5JR59 1369 aa17.72■□□□□ 0.43
UBE2A-201ENST00000346330 CCNB3Q8WWL7 1395 aa17.72■□□□□ 0.43
UBE2A-201ENST00000346330 CEP162Q5TB80 1403 aa17.72■□□□□ 0.43
UBE2A-201ENST00000346330 SPAG9O60271 1321 aaKnown RBP17.72■□□□□ 0.43
UBE2A-201ENST00000346330 INO80Q9ULG1 1556 aaPredicted RBP17.71■□□□□ 0.43
UBE2A-201ENST00000346330 CERKQ8TCT0 537 aa17.7■□□□□ 0.42
UBE2A-201ENST00000346330 UHRF1BP1Q6BDS2 1440 aa17.7■□□□□ 0.42
UBE2A-201ENST00000346330 PLXNC1O60486 1568 aa17.7■□□□□ 0.42
UBE2A-201ENST00000346330 KIAA1107Q9UPP5 1409 aa17.69■□□□□ 0.42
UBE2A-201ENST00000346330 TIAM1Q13009 1591 aa17.67■□□□□ 0.42
UBE2A-201ENST00000346330 ATP7AQ04656 1500 aa17.67■□□□□ 0.42
UBE2A-201ENST00000346330 SUPT6HQ7KZ85 1726 aaKnown RBP17.67■□□□□ 0.42
UBE2A-201ENST00000346330 MBD5Q9P267 1494 aa17.65■□□□□ 0.42
UBE2A-201ENST00000346330 ESF1Q9H501 851 aaKnown RBP17.65■□□□□ 0.42
UBE2A-201ENST00000346330 LTBP4Q8N2S1 1624 aa17.65■□□□□ 0.42
UBE2A-201ENST00000346330 MROH2AA6NES4 1674 aa17.64■□□□□ 0.42
UBE2A-201ENST00000346330 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
UBE2A-201ENST00000346330 A2MP01023 1474 aa17.63■□□□□ 0.41
UBE2A-201ENST00000346330 PLEKHH2Q8IVE3 1493 aa17.63■□□□□ 0.41
UBE2A-201ENST00000346330 EHBP1L1Q8N3D4 1523 aa17.63■□□□□ 0.41
UBE2A-201ENST00000346330 CLTCQ00610 1675 aaKnown RBP17.63■□□□□ 0.41
UBE2A-201ENST00000346330 NCOA1Q15788 1441 aa17.63■□□□□ 0.41
UBE2A-201ENST00000346330 ZMYM3Q14202 1370 aa17.62■□□□□ 0.41
UBE2A-201ENST00000346330 CNTLNQ9NXG0 1405 aa17.62■□□□□ 0.41
UBE2A-201ENST00000346330 MYO3AQ8NEV4 1616 aa17.61■□□□□ 0.41
UBE2A-201ENST00000346330 GGT6Q6P531 493 aa17.6■□□□□ 0.41
UBE2A-201ENST00000346330 ZNF142P52746 1687 aaPredicted RBP17.59■□□□□ 0.41
UBE2A-201ENST00000346330 SETD1BQ9UPS6 1966 aaKnown RBP17.59■□□□□ 0.41
UBE2A-201ENST00000346330 CAMSAP1Q5T5Y3 1602 aa17.58■□□□□ 0.41
UBE2A-201ENST00000346330 NCOA2Q15596 1464 aa17.58■□□□□ 0.41
UBE2A-201ENST00000346330 PTPRTO14522 1441 aa17.58■□□□□ 0.41
UBE2A-201ENST00000346330 NPATQ14207 1427 aa17.56■□□□□ 0.4
UBE2A-201ENST00000346330 ADGBQ8N7X0 1667 aa17.56■□□□□ 0.4
UBE2A-201ENST00000346330 PTPRKQ15262 1439 aa17.55■□□□□ 0.4
UBE2A-201ENST00000346330 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
UBE2A-201ENST00000346330 CAMSAP2Q08AD1 1489 aa17.54■□□□□ 0.4
UBE2A-201ENST00000346330 CEP170BQ9Y4F5 1589 aaPredicted RBP17.53■□□□□ 0.4
UBE2A-201ENST00000346330 NCKAP5LQ9HCH0 1330 aa17.52■□□□□ 0.4
UBE2A-201ENST00000346330 KANK4Q5T7N3 995 aaPredicted RBP17.52■□□□□ 0.4
UBE2A-201ENST00000346330 RTEL1-TNFRSF6BF6WH68 1400 aa17.52■□□□□ 0.4
UBE2A-201ENST00000346330 DHX29Q7Z478 1369 aaKnown RBP17.52■□□□□ 0.39
UBE2A-201ENST00000346330 VPS8Q8N3P4 1428 aa17.51■□□□□ 0.39
UBE2A-201ENST00000346330 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
UBE2A-201ENST00000346330 KIF3BO15066 747 aa17.49■□□□□ 0.39
UBE2A-201ENST00000346330 ILDR2Q71H61 639 aa17.49■□□□□ 0.39
UBE2A-201ENST00000346330 TCOF1Q13428 1488 aaKnown RBP17.49■□□□□ 0.39
UBE2A-201ENST00000346330 LRRC9Q6ZRR7 1453 aa17.49■□□□□ 0.39
UBE2A-201ENST00000346330 FBXO31Q5XUX0 539 aaPredicted RBP17.48■□□□□ 0.39
UBE2A-201ENST00000346330 SPATA31D1Q6ZQQ2 1576 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms