RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ADGRL1O94910 1474 aa21.89■■□□□ 1.09
TPM4-202ENST00000344824 DENND4BO75064 1496 aaPredicted RBP21.88■■□□□ 1.09
TPM4-202ENST00000344824 MTUS2Q5JR59 1369 aa21.86■■□□□ 1.09
TPM4-202ENST00000344824 EHBP1L1Q8N3D4 1523 aa21.85■■□□□ 1.09
TPM4-202ENST00000344824 VPS8Q8N3P4 1428 aa21.85■■□□□ 1.09
TPM4-202ENST00000344824 EFCAB2Q5VUJ9 269 aa21.82■■□□□ 1.08
TPM4-202ENST00000344824 SCAPERQ9BY12 1400 aa21.82■■□□□ 1.08
TPM4-202ENST00000344824 ARHGEF40Q8TER5 1519 aa21.81■■□□□ 1.08
TPM4-202ENST00000344824 TIAM1Q13009 1591 aa21.81■■□□□ 1.08
TPM4-202ENST00000344824 ITSN2Q9NZM3 1697 aa21.79■■□□□ 1.08
TPM4-202ENST00000344824 POGZQ7Z3K3 1410 aa21.78■■□□□ 1.08
TPM4-202ENST00000344824 SUPT6HQ7KZ85 1726 aaKnown RBP21.78■■□□□ 1.08
TPM4-202ENST00000344824 ZMYM4Q5VZL5 1548 aa21.78■■□□□ 1.08
TPM4-202ENST00000344824 ZFYVE16Q7Z3T8 1539 aa21.77■■□□□ 1.08
TPM4-202ENST00000344824 KDM4FA0A1W2PPD8 638 aa21.76■■□□□ 1.07
TPM4-202ENST00000344824 ABCC1P33527 1531 aa21.75■■□□□ 1.07
TPM4-202ENST00000344824 CCNB3Q8WWL7 1395 aa21.75■■□□□ 1.07
TPM4-202ENST00000344824 ZNF777Q9ULD5 760 aaPredicted RBP21.73■■□□□ 1.07
TPM4-202ENST00000344824 SAMD9LQ8IVG5 1584 aa21.73■■□□□ 1.07
TPM4-202ENST00000344824 ZNF518AQ6AHZ1 1483 aa21.72■■□□□ 1.07
TPM4-202ENST00000344824 GPATCH8Q9UKJ3 1502 aaKnown RBP21.72■■□□□ 1.07
TPM4-202ENST00000344824 YEATS2Q9ULM3 1422 aa21.7■■□□□ 1.06
TPM4-202ENST00000344824 SYCP2Q9BX26 1530 aa21.7■■□□□ 1.06
TPM4-202ENST00000344824 HECW2Q9P2P5 1572 aa21.7■■□□□ 1.06
TPM4-202ENST00000344824 MYT1LQ9UL68 1186 aa21.7■■□□□ 1.06
TPM4-202ENST00000344824 ARID4BQ4LE39 1312 aaPredicted RBP21.7■■□□□ 1.06
TPM4-202ENST00000344824 KDM5CP41229 1560 aa21.69■■□□□ 1.06
TPM4-202ENST00000344824 BCORL1Q5H9F3 1711 aa21.67■■□□□ 1.06
TPM4-202ENST00000344824 SIGLEC1Q9BZZ2 1709 aa21.67■■□□□ 1.06
TPM4-202ENST00000344824 NCOA2Q15596 1464 aa21.67■■□□□ 1.06
TPM4-202ENST00000344824 ARHGEF12Q9NZN5 1544 aa21.66■■□□□ 1.06
TPM4-202ENST00000344824 MAGI2Q86UL8 1455 aa21.66■■□□□ 1.06
TPM4-202ENST00000344824 LRRC9Q6ZRR7 1453 aa21.66■■□□□ 1.06
TPM4-202ENST00000344824 CFDP1Q9UEE9 299 aaPredicted RBP21.65■■□□□ 1.06
TPM4-202ENST00000344824 TRAPPC8Q9Y2L5 1435 aa21.64■■□□□ 1.05
TPM4-202ENST00000344824 AFAP1Q8N556 730 aa21.63■■□□□ 1.05
TPM4-202ENST00000344824 ABCA6Q8N139 1617 aa21.63■■□□□ 1.05
TPM4-202ENST00000344824 APLP2Q06481 763 aa21.63■■□□□ 1.05
TPM4-202ENST00000344824 MADDQ8WXG6 1647 aa21.62■■□□□ 1.05
TPM4-202ENST00000344824 ADAMTSL3P82987 1691 aa21.62■■□□□ 1.05
TPM4-202ENST00000344824 DIP2CQ9Y2E4 1556 aa21.61■■□□□ 1.05
TPM4-202ENST00000344824 MAP3K1Q13233 1512 aa21.61■■□□□ 1.05
TPM4-202ENST00000344824 PLEKHH2Q8IVE3 1493 aa21.6■■□□□ 1.05
TPM4-202ENST00000344824 RIMS1Q86UR5 1692 aaKnown RBP21.6■■□□□ 1.05
TPM4-202ENST00000344824 KIDINS220Q9ULH0 1771 aa21.59■■□□□ 1.05
TPM4-202ENST00000344824 C9orf84Q5VXU9 1444 aa21.59■■□□□ 1.05
TPM4-202ENST00000344824 FER1L4A9Z1Z3 1794 aa21.58■■□□□ 1.04
TPM4-202ENST00000344824 ATP10AO60312 1499 aa21.57■■□□□ 1.04
TPM4-202ENST00000344824 HNRNPMP52272 730 aaKnown RBP eCLIP21.56■■□□□ 1.04
TPM4-202ENST00000344824 KANK4Q5T7N3 995 aaPredicted RBP21.56■■□□□ 1.04
TPM4-202ENST00000344824 CAMSAP2Q08AD1 1489 aa21.56■■□□□ 1.04
TPM4-202ENST00000344824 MLH3Q9UHC1 1453 aa21.55■■□□□ 1.04
TPM4-202ENST00000344824 MLECQ14165 292 aa21.55■■□□□ 1.04
TPM4-202ENST00000344824 ZNF644Q9H582 1327 aaPredicted RBP21.54■■□□□ 1.04
TPM4-202ENST00000344824 ATP7AQ04656 1500 aa21.54■■□□□ 1.04
TPM4-202ENST00000344824 INO80Q9ULG1 1556 aaPredicted RBP21.53■■□□□ 1.04
TPM4-202ENST00000344824 KIAA1107Q9UPP5 1409 aa21.53■■□□□ 1.04
TPM4-202ENST00000344824 SPAG9O60271 1321 aaKnown RBP21.51■■□□□ 1.03
TPM4-202ENST00000344824 REREQ9P2R6 1566 aa21.49■■□□□ 1.03
TPM4-202ENST00000344824 PTPRMP28827 1452 aa21.48■■□□□ 1.03
TPM4-202ENST00000344824 PLPPR3Q6T4P5 718 aa21.47■■□□□ 1.03
TPM4-202ENST00000344824 MYOM3Q5VTT5 1437 aa21.47■■□□□ 1.03
TPM4-202ENST00000344824 CCDC141Q6ZP82 1450 aa21.46■■□□□ 1.03
TPM4-202ENST00000344824 ADGBQ8N7X0 1667 aa21.46■■□□□ 1.03
TPM4-202ENST00000344824 MBD5Q9P267 1494 aa21.45■■□□□ 1.02
TPM4-202ENST00000344824 ARHGEF5Q12774 1597 aa21.43■■□□□ 1.02
TPM4-202ENST00000344824 PTPN23Q9H3S7 1636 aa21.41■■□□□ 1.02
TPM4-202ENST00000344824 AGLP35573 1532 aa21.39■■□□□ 1.02
TPM4-202ENST00000344824 FOXD1Q16676 465 aa21.39■■□□□ 1.02
TPM4-202ENST00000344824 MIA2Q96PC5 1412 aa21.39■■□□□ 1.01
TPM4-202ENST00000344824 PLXNC1O60486 1568 aa21.38■■□□□ 1.01
TPM4-202ENST00000344824 A2MP01023 1474 aa21.38■■□□□ 1.01
TPM4-202ENST00000344824 CROCC2H7BZ55 1655 aa21.37■■□□□ 1.01
TPM4-202ENST00000344824 RTEL1-TNFRSF6BF6WH68 1400 aa21.33■■□□□ 1.01
TPM4-202ENST00000344824 FGD6Q6ZV73 1430 aa21.33■■□□□ 1.01
TPM4-202ENST00000344824 ESF1Q9H501 851 aaKnown RBP21.33■■□□□ 1.01
TPM4-202ENST00000344824 C3P01024 1663 aa21.32■■□□□ 1
TPM4-202ENST00000344824 CLTCQ00610 1675 aaKnown RBP21.32■■□□□ 1
TPM4-202ENST00000344824 TSPY4P0CV99 314 aa21.31■■□□□ 1
TPM4-202ENST00000344824 TSPY10P0CW01 314 aa21.31■■□□□ 1
TPM4-202ENST00000344824 MAST1Q9Y2H9 1570 aa21.31■■□□□ 1
TPM4-202ENST00000344824 RSPH4AQ5TD94 716 aa21.3■■□□□ 1
TPM4-202ENST00000344824 PPARGC1BQ86YN6 1023 aaKnown RBP21.3■■□□□ 1
TPM4-202ENST00000344824 DNMT1P26358 1616 aaKnown RBP21.29■■□□□ 1
TPM4-202ENST00000344824 MROH2AA6NES4 1674 aa21.26■□□□□ 0.99
TPM4-202ENST00000344824 PREX1Q8TCU6 1659 aa21.26■□□□□ 0.99
TPM4-202ENST00000344824 TCOF1Q13428 1488 aaKnown RBP21.26■□□□□ 0.99
TPM4-202ENST00000344824 CEBPAP49715 358 aaPredicted RBP21.26■□□□□ 0.99
TPM4-202ENST00000344824 GGT6Q6P531 493 aa21.25■□□□□ 0.99
TPM4-202ENST00000344824 DHX29Q7Z478 1369 aaKnown RBP21.24■□□□□ 0.99
TPM4-202ENST00000344824 DAPK1P53355 1430 aa21.23■□□□□ 0.99
TPM4-202ENST00000344824 CNTLNQ9NXG0 1405 aa21.22■□□□□ 0.99
TPM4-202ENST00000344824 SHANK2Q9UPX8 1470 aa21.22■□□□□ 0.99
TPM4-202ENST00000344824 LMTK3Q96Q04 1460 aa21.21■□□□□ 0.99
TPM4-202ENST00000344824 FAM50AQ14320 339 aaKnown RBP21.21■□□□□ 0.99
TPM4-202ENST00000344824 ABCC5O15440 1437 aa21.21■□□□□ 0.99
TPM4-202ENST00000344824 KIF3BO15066 747 aa21.2■□□□□ 0.98
TPM4-202ENST00000344824 EIF2AK4Q9P2K8 1649 aaKnown RBP21.19■□□□□ 0.98
TPM4-202ENST00000344824 SETD1BQ9UPS6 1966 aaKnown RBP21.18■□□□□ 0.98
TPM4-202ENST00000344824 DUOX2Q9NRD8 1548 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms