RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PLEKHD1A6NEE1 506 aa22.95■■□□□ 1.26
SMC4-201ENST00000344722 RWDD1Q9H446 243 aaPredicted RBP22.95■■□□□ 1.26
SMC4-201ENST00000344722 ZBED9Q6R2W3 1325 aa22.94■■□□□ 1.26
SMC4-201ENST00000344722 BAZ1BQ9UIG0 1483 aaKnown RBP22.93■■□□□ 1.26
SMC4-201ENST00000344722 PMFBP1Q8TBY8 1022 aa22.92■■□□□ 1.26
SMC4-201ENST00000344722 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
SMC4-201ENST00000344722 DCAF11Q8TEB1 546 aa22.91■■□□□ 1.26
SMC4-201ENST00000344722 NACADO15069 1562 aa22.9■■□□□ 1.26
SMC4-201ENST00000344722 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
SMC4-201ENST00000344722 ESF1Q9H501 851 aaKnown RBP22.89■■□□□ 1.25
SMC4-201ENST00000344722 MCCP23508 829 aa22.88■■□□□ 1.25
SMC4-201ENST00000344722 FAM161AQ3B820 660 aa22.87■■□□□ 1.25
SMC4-201ENST00000344722 DDX11L8A8MPP1 907 aa22.86■■□□□ 1.25
SMC4-201ENST00000344722 GOLGA6L4A6NEF3 574 aa22.86■■□□□ 1.25
SMC4-201ENST00000344722 SYAP1Q96A49 352 aaPredicted RBP22.85■■□□□ 1.25
SMC4-201ENST00000344722 ROCK2O75116 1388 aaKnown RBP22.85■■□□□ 1.25
SMC4-201ENST00000344722 CENPQQ7L2Z9 268 aaPredicted RBP22.85■■□□□ 1.25
SMC4-201ENST00000344722 ARID3AQ99856 593 aa22.84■■□□□ 1.25
SMC4-201ENST00000344722 DRC7Q8IY82 874 aa22.84■■□□□ 1.25
SMC4-201ENST00000344722 FMN1Q68DA7 1419 aa22.84■■□□□ 1.25
SMC4-201ENST00000344722 MPHOSPH9Q99550 1183 aa22.82■■□□□ 1.24
SMC4-201ENST00000344722 CARMIL1Q5VZK9 1371 aa22.82■■□□□ 1.24
SMC4-201ENST00000344722 RRP1P56182 461 aaKnown RBP22.81■■□□□ 1.24
SMC4-201ENST00000344722 NLRP13Q86W25 1043 aa22.8■■□□□ 1.24
SMC4-201ENST00000344722 MFAP1P55081 439 aaKnown RBP22.8■■□□□ 1.24
SMC4-201ENST00000344722 IPO8O15397 1037 aaKnown RBP22.8■■□□□ 1.24
SMC4-201ENST00000344722 PHLDB1Q86UU1 1377 aa22.79■■□□□ 1.24
SMC4-201ENST00000344722 GOLGA2Q08379 1002 aa22.79■■□□□ 1.24
SMC4-201ENST00000344722 CALD1Q05682 793 aaKnown RBP22.79■■□□□ 1.24
SMC4-201ENST00000344722 AMER1Q5JTC6 1135 aaPredicted RBP22.79■■□□□ 1.24
SMC4-201ENST00000344722 PRKRIP1Q9H875 184 aaPredicted RBP22.79■■□□□ 1.24
SMC4-201ENST00000344722 U2SURPO15042 1029 aaKnown RBP22.77■■□□□ 1.24
SMC4-201ENST00000344722 CHMP7Q8WUX9 453 aaPredicted RBP22.77■■□□□ 1.24
SMC4-201ENST00000344722 SLC4A3P48751 1232 aa22.77■■□□□ 1.24
SMC4-201ENST00000344722 EXOC6Q8TAG9 804 aa22.76■■□□□ 1.23
SMC4-201ENST00000344722 SKOR2Q2VWA4 1001 aaPredicted RBP22.75■■□□□ 1.23
SMC4-201ENST00000344722 L3MBTL2Q969R5 705 aa22.75■■□□□ 1.23
SMC4-201ENST00000344722 KIF15Q9NS87 1388 aa22.74■■□□□ 1.23
SMC4-201ENST00000344722 ZBTB7CA1YPR0 619 aa22.74■■□□□ 1.23
SMC4-201ENST00000344722 FOXD1Q16676 465 aa22.74■■□□□ 1.23
SMC4-201ENST00000344722 MROH2BQ7Z745 1585 aa22.73■■□□□ 1.23
SMC4-201ENST00000344722 MORC1Q86VD1 984 aa22.73■■□□□ 1.23
SMC4-201ENST00000344722 MYBBP1AQ9BQG0 1328 aaKnown RBP22.73■■□□□ 1.23
SMC4-201ENST00000344722 PKD2Q13563 968 aa22.72■■□□□ 1.23
SMC4-201ENST00000344722 KCNJ4P48050 445 aa22.7■■□□□ 1.22
SMC4-201ENST00000344722 CUX2O14529 1486 aa22.7■■□□□ 1.22
SMC4-201ENST00000344722 NPM1P06748 294 aaKnown RBP eCLIP22.7■■□□□ 1.22
SMC4-201ENST00000344722 ITPRIPQ8IWB1 547 aa22.7■■□□□ 1.22
SMC4-201ENST00000344722 TNNT3P45378 269 aaPredicted RBP22.68■■□□□ 1.22
SMC4-201ENST00000344722 HAP1P54257 671 aaPredicted RBP22.67■■□□□ 1.22
SMC4-201ENST00000344722 FGD1P98174 961 aa22.67■■□□□ 1.22
SMC4-201ENST00000344722 ANO8Q9HCE9 1232 aaPredicted RBP22.67■■□□□ 1.22
SMC4-201ENST00000344722 CENPJQ9HC77 1338 aaPredicted RBP22.66■■□□□ 1.22
SMC4-201ENST00000344722 NFKBIBQ15653 356 aa22.66■■□□□ 1.22
SMC4-201ENST00000344722 PHF14O94880 888 aa22.64■■□□□ 1.22
SMC4-201ENST00000344722 CRBNQ96SW2 442 aa22.64■■□□□ 1.21
SMC4-201ENST00000344722 OS9Q13438 667 aaPredicted RBP22.64■■□□□ 1.21
SMC4-201ENST00000344722 PRKCSHP14314 528 aaPredicted RBP22.6■■□□□ 1.21
SMC4-201ENST00000344722 DDX49Q9Y6V7 483 aaKnown RBP22.58■■□□□ 1.21
SMC4-201ENST00000344722 PLIN1O60240 522 aa22.58■■□□□ 1.21
SMC4-201ENST00000344722 CSPP1Q1MSJ5 1256 aa22.58■■□□□ 1.21
SMC4-201ENST00000344722 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.58■■□□□ 1.2
SMC4-201ENST00000344722 HTATSF1O43719 755 aaKnown RBP22.57■■□□□ 1.2
SMC4-201ENST00000344722 FOXD4L1Q9NU39 408 aa22.57■■□□□ 1.2
SMC4-201ENST00000344722 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
SMC4-201ENST00000344722 FAM43AQ8N2R8 423 aa22.56■■□□□ 1.2
SMC4-201ENST00000344722 CHMP5Q9NZZ3 219 aa22.56■■□□□ 1.2
SMC4-201ENST00000344722 KIAA1211Q6ZU35 1233 aa22.55■■□□□ 1.2
SMC4-201ENST00000344722 IL27Q8NEV9 243 aa22.55■■□□□ 1.2
SMC4-201ENST00000344722 CGNL1Q0VF96 1302 aa22.55■■□□□ 1.2
SMC4-201ENST00000344722 SMC4Q9NTJ3 1288 aa22.55■■□□□ 1.2
SMC4-201ENST00000344722 POGKQ9P215 609 aa22.55■■□□□ 1.2
SMC4-201ENST00000344722 ST18O60284 1047 aa22.54■■□□□ 1.2
SMC4-201ENST00000344722 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
SMC4-201ENST00000344722 PKNOX2Q96KN3 472 aa22.53■■□□□ 1.2
SMC4-201ENST00000344722 U2AF1L5P0DN76 240 aaPredicted RBP22.52■■□□□ 1.2
SMC4-201ENST00000344722 U2AF1Q01081 240 aaKnown RBP eCLIP22.52■■□□□ 1.25e-12■■■■■ 47.2
SMC4-201ENST00000344722 NAP1L2Q9ULW6 460 aaPredicted RBP22.51■■□□□ 1.19
SMC4-201ENST00000344722 CLUAP1Q96AJ1 413 aa22.51■■□□□ 1.19
SMC4-201ENST00000344722 SENP3Q9H4L4 574 aaPredicted RBP22.51■■□□□ 1.19
SMC4-201ENST00000344722 BRPF3Q9ULD4 1205 aa22.51■■□□□ 1.19
SMC4-201ENST00000344722 CCDC146Q8IYE0 955 aa22.5■■□□□ 1.19
SMC4-201ENST00000344722 NUP155O75694 1391 aa22.5■■□□□ 1.19
SMC4-201ENST00000344722 FAM13BQ9NYF5 915 aa22.5■■□□□ 1.19
SMC4-201ENST00000344722 CNTLNQ9NXG0 1405 aa22.49■■□□□ 1.19
SMC4-201ENST00000344722 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
SMC4-201ENST00000344722 APBB1O00213 710 aa22.49■■□□□ 1.19
SMC4-201ENST00000344722 MRE11P49959 708 aa22.49■■□□□ 1.19
SMC4-201ENST00000344722 ANKRD30AQ9BXX3 1397 aa22.49■■□□□ 1.19
SMC4-201ENST00000344722 MAP7D2Q96T17 732 aa22.48■■□□□ 1.19
SMC4-201ENST00000344722 E9PSI1 815 aa22.48■■□□□ 1.19
SMC4-201ENST00000344722 EIF3AQ14152 1382 aaKnown RBP22.48■■□□□ 1.19
SMC4-201ENST00000344722 PAK3O75914 559 aaPredicted RBP22.47■■□□□ 1.19
SMC4-201ENST00000344722 KANK1Q14678 1352 aa22.47■■□□□ 1.19
SMC4-201ENST00000344722 CCDC18Q5T9S5 1454 aa22.47■■□□□ 1.19
SMC4-201ENST00000344722 TPM4P67936 248 aa22.47■■□□□ 1.19
SMC4-201ENST00000344722 WIZO95785 1651 aa22.46■■□□□ 1.19
SMC4-201ENST00000344722 MTERF4Q7Z6M4 381 aaKnown RBP22.45■■□□□ 1.19
SMC4-201ENST00000344722 TPM2P07951 284 aa22.45■■□□□ 1.18
SMC4-201ENST00000344722 C14orf37Q86TY3 774 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms