RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 EFCAB2Q5VUJ9 269 aa33.02■■■□□ 2.88
KCNQ2-201ENST00000344425 PCF11O94913 1555 aaKnown RBP33■■■□□ 2.87
KCNQ2-201ENST00000344425 RIMS1Q86UR5 1692 aaKnown RBP32.99■■■□□ 2.87
KCNQ2-201ENST00000344425 LMTK3Q96Q04 1460 aa32.96■■■□□ 2.87
KCNQ2-201ENST00000344425 FBXO41Q8TF61 875 aa32.93■■■□□ 2.86
KCNQ2-201ENST00000344425 MLECQ14165 292 aa32.92■■■□□ 2.86
KCNQ2-201ENST00000344425 TROQ12816 1431 aaPredicted RBP32.91■■■□□ 2.86
KCNQ2-201ENST00000344425 PLPPR3Q6T4P5 718 aa32.91■■■□□ 2.86
KCNQ2-201ENST00000344425 MYO5CQ9NQX4 1742 aa32.91■■■□□ 2.86
KCNQ2-201ENST00000344425 CLIP1P30622 1438 aa32.9■■■□□ 2.86
KCNQ2-201ENST00000344425 KIF14Q15058 1648 aa32.89■■■□□ 2.86
KCNQ2-201ENST00000344425 ATP10AO60312 1499 aa32.89■■■□□ 2.86
KCNQ2-201ENST00000344425 SIGLEC1Q9BZZ2 1709 aa32.86■■■□□ 2.85
KCNQ2-201ENST00000344425 C9orf84Q5VXU9 1444 aa32.84■■■□□ 2.85
KCNQ2-201ENST00000344425 ARHGAP5Q13017 1502 aa32.82■■■□□ 2.85
KCNQ2-201ENST00000344425 ZNF518AQ6AHZ1 1483 aa32.82■■■□□ 2.85
KCNQ2-201ENST00000344425 HSPA2P54652 639 aa32.81■■■□□ 2.84
KCNQ2-201ENST00000344425 AFAP1Q8N556 730 aa32.78■■■□□ 2.84
KCNQ2-201ENST00000344425 FER1L4A9Z1Z3 1794 aa32.78■■■□□ 2.84
KCNQ2-201ENST00000344425 MYT1LQ9UL68 1186 aa32.77■■■□□ 2.84
KCNQ2-201ENST00000344425 ARHGEF12Q9NZN5 1544 aa32.75■■■□□ 2.83
KCNQ2-201ENST00000344425 CASKIN1Q8WXD9 1431 aa32.73■■■□□ 2.83
KCNQ2-201ENST00000344425 CCDC18Q5T9S5 1454 aa32.73■■■□□ 2.83
KCNQ2-201ENST00000344425 KDM5CP41229 1560 aa32.72■■■□□ 2.83
KCNQ2-201ENST00000344425 LRRIQ1Q96JM4 1722 aa32.72■■■□□ 2.83
KCNQ2-201ENST00000344425 CDC42BPBQ9Y5S2 1711 aa32.65■■■□□ 2.82
KCNQ2-201ENST00000344425 CEBPAP49715 358 aaPredicted RBP32.64■■■□□ 2.82
KCNQ2-201ENST00000344425 MLH3Q9UHC1 1453 aa32.64■■■□□ 2.82
KCNQ2-201ENST00000344425 PREX2Q70Z35 1606 aa32.62■■■□□ 2.81
KCNQ2-201ENST00000344425 DIP2CQ9Y2E4 1556 aa32.61■■■□□ 2.81
KCNQ2-201ENST00000344425 REREQ9P2R6 1566 aa32.59■■■□□ 2.81
KCNQ2-201ENST00000344425 TRAPPC8Q9Y2L5 1435 aa32.58■■■□□ 2.81
KCNQ2-201ENST00000344425 ABCC1P33527 1531 aa32.58■■■□□ 2.81
KCNQ2-201ENST00000344425 FYCO1Q9BQS8 1478 aa32.58■■■□□ 2.81
KCNQ2-201ENST00000344425 PREX1Q8TCU6 1659 aa32.56■■■□□ 2.8
KCNQ2-201ENST00000344425 ESF1Q9H501 851 aaKnown RBP32.55■■■□□ 2.8
KCNQ2-201ENST00000344425 ABCA6Q8N139 1617 aa32.54■■■□□ 2.8
KCNQ2-201ENST00000344425 CERKQ8TCT0 537 aa32.52■■■□□ 2.8
KCNQ2-201ENST00000344425 AGLP35573 1532 aa32.52■■■□□ 2.8
KCNQ2-201ENST00000344425 UHRF1BP1Q6BDS2 1440 aa32.51■■■□□ 2.79
KCNQ2-201ENST00000344425 ITSN2Q9NZM3 1697 aa32.51■■■□□ 2.79
KCNQ2-201ENST00000344425 ZNF777Q9ULD5 760 aaPredicted RBP32.5■■■□□ 2.79
KCNQ2-201ENST00000344425 DMRT2Q9Y5R5 561 aa32.5■■■□□ 2.79
KCNQ2-201ENST00000344425 CDC42BPAQ5VT25 1732 aa32.48■■■□□ 2.79
KCNQ2-201ENST00000344425 SETD1BQ9UPS6 1966 aaKnown RBP32.47■■■□□ 2.79
KCNQ2-201ENST00000344425 KIDINS220Q9ULH0 1771 aa32.42■■■□□ 2.78
KCNQ2-201ENST00000344425 GPATCH8Q9UKJ3 1502 aaKnown RBP32.41■■■□□ 2.78
KCNQ2-201ENST00000344425 SPAG9O60271 1321 aaKnown RBP32.4■■■□□ 2.78
KCNQ2-201ENST00000344425 CNTLNQ9NXG0 1405 aa32.4■■■□□ 2.78
KCNQ2-201ENST00000344425 SAMD9LQ8IVG5 1584 aa32.39■■■□□ 2.78
KCNQ2-201ENST00000344425 HNRNPMP52272 730 aaKnown RBP eCLIP32.38■■■□□ 2.77
KCNQ2-201ENST00000344425 C3P01024 1663 aa32.38■■■□□ 2.77
KCNQ2-201ENST00000344425 CFDP1Q9UEE9 299 aaPredicted RBP32.37■■■□□ 2.77
KCNQ2-201ENST00000344425 SYCP2Q9BX26 1530 aa32.36■■■□□ 2.77
KCNQ2-201ENST00000344425 CCNB3Q8WWL7 1395 aa32.35■■■□□ 2.77
KCNQ2-201ENST00000344425 PLEKHH2Q8IVE3 1493 aa32.34■■■□□ 2.77
KCNQ2-201ENST00000344425 KIAA1107Q9UPP5 1409 aa32.34■■■□□ 2.77
KCNQ2-201ENST00000344425 STRCQ7RTU9 1775 aa32.33■■■□□ 2.77
KCNQ2-201ENST00000344425 MTUS2Q5JR59 1369 aa32.33■■■□□ 2.77
KCNQ2-201ENST00000344425 PTPRTO14522 1441 aa32.27■■■□□ 2.76
KCNQ2-201ENST00000344425 ATP7AQ04656 1500 aa32.26■■■□□ 2.75
KCNQ2-201ENST00000344425 ZMYM3Q14202 1370 aa32.24■■■□□ 2.75
KCNQ2-201ENST00000344425 NPATQ14207 1427 aa32.24■■■□□ 2.75
KCNQ2-201ENST00000344425 A2MP01023 1474 aa32.21■■■□□ 2.75
KCNQ2-201ENST00000344425 MROH2AA6NES4 1674 aa32.21■■■□□ 2.75
KCNQ2-201ENST00000344425 SUPT6HQ7KZ85 1726 aaKnown RBP32.2■■■□□ 2.75
KCNQ2-201ENST00000344425 INO80Q9ULG1 1556 aaPredicted RBP32.19■■■□□ 2.74
KCNQ2-201ENST00000344425 PLXNC1O60486 1568 aa32.16■■■□□ 2.74
KCNQ2-201ENST00000344425 NCOA1Q15788 1441 aa32.16■■■□□ 2.74
KCNQ2-201ENST00000344425 GGT6Q6P531 493 aa32.16■■■□□ 2.74
KCNQ2-201ENST00000344425 PPP6R1Q9UPN7 881 aa32.15■■■□□ 2.74
KCNQ2-201ENST00000344425 EHBP1L1Q8N3D4 1523 aa32.14■■■□□ 2.74
KCNQ2-201ENST00000344425 ZNF644Q9H582 1327 aaPredicted RBP32.13■■■□□ 2.73
KCNQ2-201ENST00000344425 TIAM1Q13009 1591 aa32.12■■■□□ 2.73
KCNQ2-201ENST00000344425 CEP162Q5TB80 1403 aa32.1■■■□□ 2.73
KCNQ2-201ENST00000344425 CLTCQ00610 1675 aaKnown RBP32.09■■■□□ 2.73
KCNQ2-201ENST00000344425 CAMSAP1Q5T5Y3 1602 aa32.08■■■□□ 2.73
KCNQ2-201ENST00000344425 MBD5Q9P267 1494 aa32.08■■■□□ 2.73
KCNQ2-201ENST00000344425 RTEL1-TNFRSF6BF6WH68 1400 aa32.07■■■□□ 2.72
KCNQ2-201ENST00000344425 ADGBQ8N7X0 1667 aa32.06■■■□□ 2.72
KCNQ2-201ENST00000344425 PTPRKQ15262 1439 aa32.05■■■□□ 2.72
KCNQ2-201ENST00000344425 LTBP4Q8N2S1 1624 aa32.03■■■□□ 2.72
KCNQ2-201ENST00000344425 NCKAP5LQ9HCH0 1330 aa32.01■■■□□ 2.71
KCNQ2-201ENST00000344425 DHX29Q7Z478 1369 aaKnown RBP32.01■■■□□ 2.71
KCNQ2-201ENST00000344425 PKD2Q13563 968 aa32■■■□□ 2.71
KCNQ2-201ENST00000344425 RSPH4AQ5TD94 716 aa32■■■□□ 2.71
KCNQ2-201ENST00000344425 IQSEC2Q5JU85 1478 aa31.99■■■□□ 2.71
KCNQ2-201ENST00000344425 PLA2R1Q13018 1463 aa31.97■■■□□ 2.71
KCNQ2-201ENST00000344425 MYO3AQ8NEV4 1616 aa31.97■■■□□ 2.71
KCNQ2-201ENST00000344425 NCOA2Q15596 1464 aa31.96■■■□□ 2.71
KCNQ2-201ENST00000344425 ZNF142P52746 1687 aaPredicted RBP31.96■■■□□ 2.71
KCNQ2-201ENST00000344425 CEP170BQ9Y4F5 1589 aaPredicted RBP31.95■■■□□ 2.71
KCNQ2-201ENST00000344425 CCDC141Q6ZP82 1450 aa31.94■■■□□ 2.7
KCNQ2-201ENST00000344425 KIF3BO15066 747 aa31.93■■■□□ 2.7
KCNQ2-201ENST00000344425 CAMSAP2Q08AD1 1489 aa31.9■■■□□ 2.7
KCNQ2-201ENST00000344425 TCOF1Q13428 1488 aaKnown RBP31.9■■■□□ 2.7
KCNQ2-201ENST00000344425 DISP3Q9P2K9 1392 aa31.88■■■□□ 2.69
KCNQ2-201ENST00000344425 ZNF335Q9H4Z2 1342 aaPredicted RBP31.88■■■□□ 2.69
KCNQ2-201ENST00000344425 TSPY4P0CV99 314 aa31.87■■■□□ 2.69
KCNQ2-201ENST00000344425 TSPY10P0CW01 314 aa31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms